reinit the tree, so we can have metadata

3 files changed, 56 insertions, 0 deletions

diff --git a/sci-biology/biosql/Manifest b/sci-biology/biosql/Manifest
new file mode 100644
index 000000000000..adcb409dbba8
--- /dev/null
+++ b/sci-biology/biosql/Manifest
@@ -0,0 +1,5 @@
+DIST biosql-1.0.1.tar.bz2 253516 SHA256 3604ceaf6f3e42a11613b49577b7c68f04d9e094cca4e5d932359c815fc9ad01 SHA512 2e1fef6ab9b4386f146910937700f9108f8ef266161b7adfbbc52c0011eebc84716637c897a01a399ff39b066ff0a5905ba3fa27e7b41f53a87baf58d5b32695 WHIRLPOOL 3f29a647dc991dd59840aa681df8d5664a15ca5b83a72bb23926517dd8e7734c2db8b07e1f426c73a99fa72ef13e3fd3255c67eeb09ae11afc6804bfaa8a5d54
+EBUILD biosql-1.0.1-r1.ebuild 989 SHA256 ca3ac50d2fec3c37a05e724c4ae7bc836227e01d7ece5b52dac1f634b9de9932 SHA512 874448ac12a4e0331ec7b7b5ce8843928f92a6b42987975380715d39f7d0fc5c0cf688c4a596963ae5b008b55367fab3db317a8d17a19230d113e4d8e142c37f WHIRLPOOL d92e69a119ed8a1f1e17d79e354a7a2a6558a6192950b589acc34e0d5f06b9a51231d41a4aab3f940b633668a4422a1b8dad22b38b38f05551e43df9db99b3ec
+MISC ChangeLog 2427 SHA256 9e245904d449f003463811df37ad7a13dcb52c8a6f267c3d206a8f4903aa4525 SHA512 282237f1fe33f8d73270970e4d20ae5fbbb731d78a0195a7d439e1c72937da38ab242553af7a0056bebe6bad6f6803a0c9ff6f87db7220ffd2575b3ca112c00e WHIRLPOOL cbb0d8828adfd028ab16aa5410bc07b4c3e2ce6971cce89942d897cd4f6265b70c2840d79400dd43ef05f99fe447e98c0bc861f0685b5e17ea7cd955e55f34c9
+MISC ChangeLog-2015 820 SHA256 d6640bdb2894832c6ac2711f92f9b0692d358da83480f27983417fee81383d38 SHA512 2692437c36287fb01616e34c7e75b91cc62a635b9a5dca3fc5de9096a1a5fc14f5b251a7e5d7c14d4638c32b7b65417431b0cb465c00a7c147f181e04a83d473 WHIRLPOOL 8802950e9882d07bb853e2353b00c416a0f531800d54a086fec51949cf8e22fdd7cf6a9ac8b2144d3dbe9d0012cbe890d7e6c8552c2e0dba2040efd664264a77
+MISC metadata.xml 267 SHA256 b3535fccca0fc8511c1245214c1a7c105447b35f21093bda132991874ce82d48 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403 WHIRLPOOL d841a2f928c50434f2e8c65f583ea3aa2d04e5cebd664b1531ab5373260f735219131991000bbb2b21aa3add05dcdce29548b78eac8d8c0eced6dc5505b64e13
diff --git a/sci-biology/biosql/biosql-1.0.1-r1.ebuild b/sci-biology/biosql/biosql-1.0.1-r1.ebuild
new file mode 100644
index 000000000000..6508d6a3a2e8
--- /dev/null
+++ b/sci-biology/biosql/biosql-1.0.1-r1.ebuild
@@ -0,0 +1,43 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+DESCRIPTION="A generic bioinformatics relational database model"
+HOMEPAGE="http://www.biosql.org/"
+SRC_URI="http://biosql.org/DIST/${P}.tar.bz2"
+
+LICENSE="LGPL-3"
+SLOT="0"
+KEYWORDS="amd64 x86"
+IUSE="mysql postgres"
+
+# WARNING: bioperl-db is claimed to be incompatible with >=postgresql-8.3 (see INSTALL)
+
+DEPEND="
+	mysql? ( dev-perl/DBD-mysql )
+	postgres? ( dev-perl/DBD-Pg )"
+RDEPEND="
+	${DEPEND}
+	dev-lang/perl"
+
+src_install() {
+	insinto /usr/share/${PN}
+	doins -r sql scripts/.
+
+	dodoc Changes README Release.txt doc/*.pdf
+
+	docinto biopython
+	dodoc doc/{README,schema-overview.txt,biopython/{cor6_6.gb,*.pdf}}
+	docompress -x /usr/share/doc/${PF}/biopython
+
+	docinto html
+	dodoc doc/{biopython/,}*.htm*
+}
+
+pkg_postinst() {
+	elog
+	elog "Please read the BioSQL schema installation instructions in"
+	elog "${EROOT%/}/usr/share/doc/${PF} to begin using the schema."
+	elog
+}
diff --git a/sci-biology/biosql/metadata.xml b/sci-biology/biosql/metadata.xml
new file mode 100644
index 000000000000..959160fe46b1
--- /dev/null
+++ b/sci-biology/biosql/metadata.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="project">
+    <email>sci-biology@gentoo.org</email>
+    <name>Gentoo Biology Project</name>
+  </maintainer>
+</pkgmetadata>