diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2020-01-15 15:51:32 +0000 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2020-01-15 15:51:32 +0000 |
| commit | 21435953e16cda318a82334ddbadb3b5c36d9ea7 (patch) | |
| tree | e1810a4b135afce04b34862ef0fab2bfaeb8aeca /sci-biology/bioperl | |
| parent | 7bc9c63c9da678a7e6fceb095d56c634afd22c56 (diff) | |
gentoo resync : 15.01.2020
Diffstat (limited to 'sci-biology/bioperl')
| -rw-r--r-- | sci-biology/bioperl/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/bioperl/bioperl-9999-r1.ebuild | 73 |
2 files changed, 0 insertions, 74 deletions
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest index 60c0ff81b7a9..d687d9661fee 100644 --- a/sci-biology/bioperl/Manifest +++ b/sci-biology/bioperl/Manifest @@ -1,4 +1,3 @@ DIST BioPerl-1.6.901.tar.gz 12284856 BLAKE2B 004947fde9d02355ac96f71b67a33a27d6d0163892c978ac9059e70e089fb83b473e21252c5217dfba8faaa65bc3d2eebb8826d03f29a13409e2b6d337316b42 SHA512 227387437c940da1435ed83fad6ec2168ca12a729c90dc557e84750c6474213874c23a8f23e50db4027909469627baee581faa11be6208c8e0a5453a01c7eca4 EBUILD bioperl-1.6.9.ebuild 1544 BLAKE2B 83878553b6badd2c209da398bfd83e1733b94e85f44af140ffe3acc6a2915f41643483751845a32c838889b3468c66bd20bc899248953848ce4d6a47d0bb083d SHA512 2e6167abb3ab729eef114ef9e38955e5d2b5353efaf86f5af16aa00348a661adc5b2297f22c2a77126c7f4f3f08f3db9c0af4210ddb3328653f11b1f5a782744 -EBUILD bioperl-9999-r1.ebuild 1793 BLAKE2B 4b6d953bbbe3b3f233ad3c26fd446a145026d372f932b04273b6bc8fca823cb074ce4353ef07c15c61fe49dade606926275fc8448571acabd7a47462d857cc7c SHA512 25459e6fdeacb6bded0c81a4bbd3a6d85f7cbae973b6f9b8a2ee1a44ab56b5a81556b1c6176e389e57efa660fdb35a6b61c71aca65f90e221bc04a0dda395e5c MISC metadata.xml 541 BLAKE2B c01f01fae7a659a708d0d3d6520e98f5bb8fd0e848fd82ae11ba7b6806f18c3ce271d76f94123f6a47c33ca88ea665689b1ec5664c114e28ec18443a87cb31de SHA512 0693aba25e02d3ad67f82c2c77f9987ae06cb6545bb58df2c57f076a22d5c2f6d15c7fdc11b0766748680d53c709c7682b53f866a4f45d7d8a875d1311277e5c diff --git a/sci-biology/bioperl/bioperl-9999-r1.ebuild b/sci-biology/bioperl/bioperl-9999-r1.ebuild deleted file mode 100644 index f166946c008f..000000000000 --- a/sci-biology/bioperl/bioperl-9999-r1.ebuild +++ /dev/null @@ -1,73 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI="5" - -inherit perl-module git-2 - -SUBPROJECTS="+db +network +run" - -DESCRIPTION="Perl tools for bioinformatics - Core modules" -HOMEPAGE="http://www.bioperl.org/" -SRC_URI="" -EGIT_REPO_URI="https://github.com/${PN}/${PN}-live.git" - -LICENSE="Artistic GPL-2" -SLOT="0" -KEYWORDS="" -IUSE="-minimal graphviz ${SUBPROJECTS}" - -CDEPEND=" - dev-perl/Data-Stag - dev-perl/libwww-perl - !minimal? ( - dev-perl/Ace - dev-perl/Bio-ASN1-EntrezGene - dev-perl/Spreadsheet-ParseExcel - dev-perl/Spreadsheet-WriteExcel - >=dev-perl/XML-SAX-0.15 - dev-perl/Graph - dev-perl/SOAP-Lite - dev-perl/Array-Compare - dev-perl/SVG - dev-perl/XML-Simple - dev-perl/XML-Parser - dev-perl/XML-Twig - >=dev-perl/HTML-Parser-3.60 - >=dev-perl/XML-Writer-0.4 - dev-perl/Clone - dev-perl/XML-DOM - dev-perl/Set-Scalar - dev-perl/XML-XPath - dev-perl/XML-DOM-XPath - dev-perl/Algorithm-Munkres - dev-perl/Data-Stag - dev-perl/Math-Random - dev-perl/PostScript - dev-perl/Convert-Binary-C - dev-perl/SVG-Graph - ) - graphviz? ( dev-perl/GraphViz )" -DEPEND="dev-perl/Module-Build - ${CDEPEND}" -RDEPEND="${CDEPEND}" -PDEPEND="!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) - db? ( >=sci-biology/bioperl-db-${PV} ) - network? ( >=sci-biology/bioperl-network-${PV} ) - run? ( >=sci-biology/bioperl-run-${PV} )" - -S="${WORKDIR}/BioPerl-${PV}" - -src_configure() { - sed -i -e '/add_post_install_script.*symlink_script.pl/d' \ - -e "/'CPAN' *=> *1.81/d" "${S}/Build.PL" \ - -e "/'ExtUtils::Manifest' *=> *'1.52'/d" "${S}/Build.PL" \ - || die - if use minimal && use graphviz; then die "USE flags minimal and graphviz cannot be used together"; fi - perl-module_src_configure -} - -src_install() { - mydoc="AUTHORS BUGS FAQ" - perl-module_src_install -} |