diff options
author | V3n3RiX <venerix@koprulu.sector> | 2022-06-29 12:04:12 +0100 |
---|---|---|
committer | V3n3RiX <venerix@koprulu.sector> | 2022-06-29 12:04:12 +0100 |
commit | 0f558761aa2dee1017b4751e4017205e015a9560 (patch) | |
tree | 037df795519468a25d9362b4e95cdaeb84eb1cf9 /metadata/md5-cache/sci-chemistry | |
parent | 752d6256e5204b958b0ef7905675a940b5e9172f (diff) |
gentoo resync : 29.12.2022
Diffstat (limited to 'metadata/md5-cache/sci-chemistry')
83 files changed, 213 insertions, 180 deletions
diff --git a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0-r1 b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0-r1 index 6f9b3bf93fe3..aa07e2e1b5c7 100644 --- a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0-r1 +++ b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0-r1 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/Becksteinlab/GromacsWrapper/archive/release-0.8.0.tar.gz -> GromacsWrapper-0.8.0.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-snapshot 19dc666868420457132a7514d4621476 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb vcs-snapshot 19dc666868420457132a7514d4621476 _md5_=488ae7cbcc578e8701d473e8f3cc3bfe diff --git a/metadata/md5-cache/sci-chemistry/MDAnalysis-1.0.0 b/metadata/md5-cache/sci-chemistry/MDAnalysis-1.0.0 index 09a34f11b956..ec14a524f234 100644 --- a/metadata/md5-cache/sci-chemistry/MDAnalysis-1.0.0 +++ b/metadata/md5-cache/sci-chemistry/MDAnalysis-1.0.0 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://pypi/M/MDAnalysis/MDAnalysis-1.0.0.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=e07b9d991b0ebdc5253eec932ecf80ed diff --git a/metadata/md5-cache/sci-chemistry/MDAnalysis-2.0.0 b/metadata/md5-cache/sci-chemistry/MDAnalysis-2.0.0 index 0ecddb436e99..692d4b9a8277 100644 --- a/metadata/md5-cache/sci-chemistry/MDAnalysis-2.0.0 +++ b/metadata/md5-cache/sci-chemistry/MDAnalysis-2.0.0 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/M/MDAnalysis/MDAnalysis-2.0.0.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=ee1c9d9dd59c78af672cdcd2522e7f83 diff --git a/metadata/md5-cache/sci-chemistry/Manifest.gz b/metadata/md5-cache/sci-chemistry/Manifest.gz Binary files differindex ad68d1a1d73e..0182a7bf2308 100644 --- a/metadata/md5-cache/sci-chemistry/Manifest.gz +++ b/metadata/md5-cache/sci-chemistry/Manifest.gz diff --git a/metadata/md5-cache/sci-chemistry/ParmEd-3.4.3 b/metadata/md5-cache/sci-chemistry/ParmEd-3.4.3 index fdeb1fef9c70..3b5e530c8a86 100644 --- a/metadata/md5-cache/sci-chemistry/ParmEd-3.4.3 +++ b/metadata/md5-cache/sci-chemistry/ParmEd-3.4.3 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/ParmEd/ParmEd/archive/refs/tags/3.4.3.tar.gz -> ParmEd-3.4.3.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=77692821f30ef48205d108cdfb1a6b77 diff --git a/metadata/md5-cache/sci-chemistry/aqua-3.2-r3 b/metadata/md5-cache/sci-chemistry/aqua-3.2-r3 index e4e72951920b..e0f75534bf70 100644 --- a/metadata/md5-cache/sci-chemistry/aqua-3.2-r3 +++ b/metadata/md5-cache/sci-chemistry/aqua-3.2-r3 @@ -11,5 +11,5 @@ RDEPEND=sci-chemistry/procheck virtual/fortran RESTRICT=fetch SLOT=0 SRC_URI=aqua3.2.tar.gz doc? ( aqua-3.2-nmr_manual.tar.gz ) -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff fortran-2 72d28c6872beb1e7cb99684b0ae4715d ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4a33c9008e5ee30cb8840a3fdc24df2b preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 28f0f3c0226306ec5f49e13bf851f171 estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff fortran-2 72d28c6872beb1e7cb99684b0ae4715d ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4fbbbc98f236f1b43acd99476bc3cd85 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=448c80984b2fce68c6d5bef34cf480bc diff --git a/metadata/md5-cache/sci-chemistry/autodock-4.2.6 b/metadata/md5-cache/sci-chemistry/autodock-4.2.6 index 53bfc10857d9..58389c81c528 100644 --- a/metadata/md5-cache/sci-chemistry/autodock-4.2.6 +++ b/metadata/md5-cache/sci-chemistry/autodock-4.2.6 @@ -3,10 +3,11 @@ DEFINED_PHASES=compile configure install postinst prepare DESCRIPTION=A suite of automated docking tools EAPI=7 HOMEPAGE=http://autodock.scripps.edu/ +INHERIT=autotools readme.gentoo-r1 IUSE=examples openmp KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://autodock.scripps.edu/downloads/autodock-registration/tars/dist426/autodocksuite-4.2.6-src.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=d7668bb3320103bf68b0e5508795e623 diff --git a/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2-r1 b/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2-r1 index 8a88bfe9034c..5dce03a721ee 100644 --- a/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2-r1 +++ b/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2-r1 @@ -3,11 +3,12 @@ DEPEND=dev-libs/boost:=[threads(+)] DESCRIPTION=Program for drug discovery, molecular docking and virtual screening EAPI=7 HOMEPAGE=http://vina.scripps.edu/ +INHERIT=flag-o-matic toolchain-funcs IUSE=debug KEYWORDS=amd64 x86 LICENSE=Apache-2.0 RDEPEND=dev-libs/boost:=[threads(+)] SLOT=0 SRC_URI=http://vina.scripps.edu/download/autodock_vina_1_1_2.tgz -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=bf9f0ccb6ff91d9c5e39926a82a79331 diff --git a/metadata/md5-cache/sci-chemistry/avogadro2-1.95.1 b/metadata/md5-cache/sci-chemistry/avogadro2-1.95.1 index 2fdf68e20679..e3217aec1e08 100644 --- a/metadata/md5-cache/sci-chemistry/avogadro2-1.95.1 +++ b/metadata/md5-cache/sci-chemistry/avogadro2-1.95.1 @@ -1,4 +1,4 @@ -BDEPEND=doc? ( app-doc/doxygen media-gfx/graphviz ) dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=doc? ( app-doc/doxygen media-gfx/graphviz ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst postrm preinst prepare test unpack DEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 >=sci-libs/avogadrolibs-1.95.1[qt5,vtk?] sci-libs/hdf5:= rpc? ( sci-chemistry/molequeue ) dev-cpp/eigen:3 test? ( dev-qt/qttest:5 ) DESCRIPTION=Advanced molecule editor and visualizer 2 @@ -12,5 +12,5 @@ RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 >=sci-libs/avogadrolib RESTRICT=test SLOT=0 SRC_URI=https://github.com/OpenChemistry/avogadroapp/archive/1.95.1.tar.gz -> avogadro2-1.95.1.tar.gz https://github.com/OpenChemistry/avogadro-i18n/archive/3b8a86cc37e988b043d1503d2f11068389b0aca3.tar.gz -> avogadro2-1.95.1-i18n.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 desktop c0d27bf73aa08ca05b663dbd31fbef28 docs 8ed2a8a28ff109e7a3582c9abb7fe327 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d desktop 22952d8f27cac191d75529d4c38e6bfa docs 8ed2a8a28ff109e7a3582c9abb7fe327 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=63852b6e1a0d593b6df49dc2b1b457f0 diff --git a/metadata/md5-cache/sci-chemistry/chemex-2021.4.0_p6 b/metadata/md5-cache/sci-chemistry/chemex-2021.4.0_p6 index 9e40661bfaaf..e1f47dca84e9 100644 --- a/metadata/md5-cache/sci-chemistry/chemex-2021.4.0_p6 +++ b/metadata/md5-cache/sci-chemistry/chemex-2021.4.0_p6 @@ -13,5 +13,5 @@ REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=https://github.com/gbouvignies/chemex/archive/2021.4.0-dev6.tar.gz -> chemex-2021.4.0_p6.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=e88fafb6cccdbbff67212d6d8600b15b diff --git a/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r4 b/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r4 index 514a24620f77..f5290925e011 100644 --- a/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r4 +++ b/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r4 @@ -4,10 +4,11 @@ DEPEND=x11-misc/shared-mime-info dev-util/desktop-file-utils x11-misc/shared-mim DESCRIPTION=A collection of data files to add support for chemical MIME types EAPI=7 HOMEPAGE=https://github.com/dleidert/chemical-mime +INHERIT=autotools xdg KEYWORDS=amd64 arm arm64 x86 LICENSE=LGPL-2.1 RDEPEND=x11-misc/shared-mime-info SLOT=0 SRC_URI=mirror://sourceforge/chemical-mime/chemical-mime-data-0.1.94.tar.bz2 -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=ef20453c790cdce1b95bf2825929168e diff --git a/metadata/md5-cache/sci-chemistry/chemtool-1.6.14 b/metadata/md5-cache/sci-chemistry/chemtool-1.6.14 index b2a35aee56fc..51bd740bd32f 100644 --- a/metadata/md5-cache/sci-chemistry/chemtool-1.6.14 +++ b/metadata/md5-cache/sci-chemistry/chemtool-1.6.14 @@ -4,11 +4,12 @@ DEPEND=dev-libs/glib:2 media-gfx/transfig x11-libs/gtk+:2 x11-libs/libX11 x11-li DESCRIPTION=A GTK program for drawing organic molecules EAPI=7 HOMEPAGE=http://ruby.chemie.uni-freiburg.de/~martin/chemtool/ +INHERIT=autotools desktop IUSE=emf gnome nls KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 RDEPEND=dev-libs/glib:2 media-gfx/transfig x11-libs/gtk+:2 x11-libs/libX11 x11-libs/pango emf? ( media-libs/libemf ) SLOT=0 SRC_URI=http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-1.6.14.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 desktop c0d27bf73aa08ca05b663dbd31fbef28 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 desktop 22952d8f27cac191d75529d4c38e6bfa gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=ec2a33e3b596e37ff37f7d67c3756378 diff --git a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1 b/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1 index 1573e8bba6b9..2f40f6a18e7a 100644 --- a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1 +++ b/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1 @@ -2,9 +2,10 @@ DEFINED_PHASES=configure install DESCRIPTION=Build lists of collections of interacting items EAPI=8 HOMEPAGE=http://kinemage.biochem.duke.edu/software/index.php +INHERIT=toolchain-funcs KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=richardson SLOT=0 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/cluster/cluster.1.3.081231.src.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=268abf9ec98b541a31b65182ab2e3413 diff --git a/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r3 b/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r3 index b831043564ad..fc87ccfd472b 100644 --- a/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r3 +++ b/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r3 @@ -3,10 +3,11 @@ DEPEND=dev-libs/boost:=[bzip2,zlib,threads(+)] DESCRIPTION=The protein secondary structure standard EAPI=8 HOMEPAGE=https://swift.cmbi.umcn.nl/gv/dssp/ +INHERIT=toolchain-funcs KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=Boost-1.0 RDEPEND=dev-libs/boost:=[bzip2,zlib,threads(+)] SLOT=0 SRC_URI=ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/dssp-2.2.1.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=5bb33f61f022116b4634830d56bd86c4 diff --git a/metadata/md5-cache/sci-chemistry/dssp-3.0.11 b/metadata/md5-cache/sci-chemistry/dssp-3.0.11 index 881137e2c29e..ecc650bd45e0 100644 --- a/metadata/md5-cache/sci-chemistry/dssp-3.0.11 +++ b/metadata/md5-cache/sci-chemistry/dssp-3.0.11 @@ -4,11 +4,12 @@ DEPEND=dev-lang/perl:= dev-libs/boost:=[bzip2,zlib,threads(+)] DESCRIPTION=The protein secondary structure standard EAPI=8 HOMEPAGE=https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/cmbi/hssp -KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux +INHERIT=autotools +KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux LICENSE=Boost-1.0 RDEPEND=dev-lang/perl:= dev-libs/boost:=[bzip2,zlib,threads(+)] RESTRICT=test SLOT=0 SRC_URI=https://github.com/cmbi/hssp/archive/refs/tags/3.0.11.tar.gz -> dssp-3.0.11.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 -_md5_=071f40b480ad765fe47bc4f558fd2362 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb +_md5_=f535021b5e3b17c0bd4f569e0b854d2a diff --git a/metadata/md5-cache/sci-chemistry/dssp-4.0.3 b/metadata/md5-cache/sci-chemistry/dssp-4.0.3 index b9f35295e534..d40727e3cefa 100644 --- a/metadata/md5-cache/sci-chemistry/dssp-4.0.3 +++ b/metadata/md5-cache/sci-chemistry/dssp-4.0.3 @@ -1,4 +1,4 @@ -BDEPEND=>=dev-libs/boost-1.70.0:=[zlib,threads(+)] >=sci-libs/libcifpp-2.0.0 dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=>=dev-libs/boost-1.70.0:=[zlib,threads(+)] >=sci-libs/libcifpp-2.0.0 >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare test DESCRIPTION=The protein secondary structure standard EAPI=7 @@ -9,5 +9,5 @@ LICENSE=BSD-2 RDEPEND=>=dev-libs/boost-1.70.0:=[zlib,threads(+)] >=sci-libs/libcifpp-2.0.0 SLOT=0 SRC_URI=https://github.com/PDB-REDO/dssp/archive/refs/tags/v4.0.3.tar.gz -> dssp-4.0.3.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=daa868294719659d6a3fd98b76089e85 diff --git a/metadata/md5-cache/sci-chemistry/dssp-4.0.4 b/metadata/md5-cache/sci-chemistry/dssp-4.0.4 index 5d793f78336f..236bb8d0f4f5 100644 --- a/metadata/md5-cache/sci-chemistry/dssp-4.0.4 +++ b/metadata/md5-cache/sci-chemistry/dssp-4.0.4 @@ -1,4 +1,4 @@ -BDEPEND=>=dev-libs/boost-1.70.0:=[zlib,threads(+)] >=sci-libs/libcifpp-2.0.0 dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=>=dev-libs/boost-1.70.0:=[zlib,threads(+)] >=sci-libs/libcifpp-2.0.0 >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare test DESCRIPTION=The protein secondary structure standard EAPI=8 @@ -9,5 +9,5 @@ LICENSE=BSD-2 RDEPEND=>=dev-libs/boost-1.70.0:=[zlib,threads(+)] >=sci-libs/libcifpp-2.0.0 SLOT=0 SRC_URI=https://github.com/PDB-REDO/dssp/archive/refs/tags/4.0.4.tar.gz -> dssp-4.0.4.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=537f12b4c6b2e521f1b09d169e7640ad diff --git a/metadata/md5-cache/sci-chemistry/easychem-0.6-r1 b/metadata/md5-cache/sci-chemistry/easychem-0.6-r1 index 4a30ccccff21..1b75c14a7e5f 100644 --- a/metadata/md5-cache/sci-chemistry/easychem-0.6-r1 +++ b/metadata/md5-cache/sci-chemistry/easychem-0.6-r1 @@ -4,10 +4,11 @@ DEPEND=app-text/ghostscript-gpl media-gfx/pstoedit x11-libs/gtk+:2 DESCRIPTION=Chemical structure drawing program - focused on presentation EAPI=8 HOMEPAGE=http://easychem.sourceforge.net/ +INHERIT=toolchain-funcs KEYWORDS=amd64 ~ppc x86 ~amd64-linux ~x86-linux LICENSE=GPL-2 RDEPEND=app-text/ghostscript-gpl media-gfx/pstoedit x11-libs/gtk+:2 SLOT=0 SRC_URI=mirror://sourceforge/easychem/easychem-0.6.tar.gz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=1ea10a60ef6dccb3f0be1851d5a6c92b diff --git a/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2 b/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2 index 324540381de7..c8ce04100497 100644 --- a/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2 +++ b/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2 @@ -3,10 +3,11 @@ DEPEND=x11-libs/xforms DESCRIPTION=periodic table of the elements EAPI=6 HOMEPAGE=http://elem.sourceforge.net/ +INHERIT=toolchain-funcs KEYWORDS=amd64 sparc x86 LICENSE=GPL-2 RDEPEND=x11-libs/xforms SLOT=0 SRC_URI=mirror://sourceforge/elem/elem-src-1.0.3-Linux.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=3d04f4bb12447f29a2873239829212ee diff --git a/metadata/md5-cache/sci-chemistry/gelemental-2.0.0-r1 b/metadata/md5-cache/sci-chemistry/gelemental-2.0.0-r1 index 9c592992e234..585e1481456a 100644 --- a/metadata/md5-cache/sci-chemistry/gelemental-2.0.0-r1 +++ b/metadata/md5-cache/sci-chemistry/gelemental-2.0.0-r1 @@ -4,11 +4,12 @@ DEPEND=dev-cpp/gtkmm:2.4 dev-cpp/glibmm:2 dev-util/desktop-file-utils x11-misc/s DESCRIPTION=Periodic table viewer with detailed information on the chemical elements EAPI=7 HOMEPAGE=https://github.com/ginggs/gelemental/ +INHERIT=autotools flag-o-matic xdg IUSE=doc KEYWORDS=amd64 x86 LICENSE=GPL-3 MIT RDEPEND=dev-cpp/gtkmm:2.4 dev-cpp/glibmm:2 SLOT=0 SRC_URI=https://github.com/ginggs/gelemental/archive/v2.0.0.tar.gz -> gelemental-2.0.0.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=716664ceafa23c14a74889a015499733 diff --git a/metadata/md5-cache/sci-chemistry/gelemental-2.0.1 b/metadata/md5-cache/sci-chemistry/gelemental-2.0.1 index 7d3d38e6f509..15da7c30a441 100644 --- a/metadata/md5-cache/sci-chemistry/gelemental-2.0.1 +++ b/metadata/md5-cache/sci-chemistry/gelemental-2.0.1 @@ -4,11 +4,12 @@ DEPEND=dev-cpp/gtkmm:2.4 dev-cpp/glibmm:2 DESCRIPTION=Periodic table viewer with detailed information on the chemical elements EAPI=8 HOMEPAGE=https://github.com/ginggs/gelemental/ +INHERIT=autotools flag-o-matic xdg IUSE=doc KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 MIT RDEPEND=dev-cpp/gtkmm:2.4 dev-cpp/glibmm:2 SLOT=0 SRC_URI=https://github.com/ginggs/gelemental/archive/v2.0.1.tar.gz -> gelemental-2.0.1.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=e3bbd7e44322b4a69d0d6c82ecee9634 diff --git a/metadata/md5-cache/sci-chemistry/gnome-chemistry-utils-0.14.17_p6-r1 b/metadata/md5-cache/sci-chemistry/gnome-chemistry-utils-0.14.17_p6-r1 index a8cd8d7dc774..1fecb232a608 100644 --- a/metadata/md5-cache/sci-chemistry/gnome-chemistry-utils-0.14.17_p6-r1 +++ b/metadata/md5-cache/sci-chemistry/gnome-chemistry-utils-0.14.17_p6-r1 @@ -4,11 +4,12 @@ DEPEND=>=dev-libs/glib-2.36.0:2 >=dev-libs/libxml2-2.4.16:2 >=gnome-extra/libgsf DESCRIPTION=Programs and library containing GTK widgets and C++ classes related to chemistry EAPI=8 HOMEPAGE=http://gchemutils.nongnu.org/ +INHERIT=autotools flag-o-matic xdg IUSE=gnumeric KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 RDEPEND=>=dev-libs/glib-2.36.0:2 >=dev-libs/libxml2-2.4.16:2 >=gnome-extra/libgsf-1.14.9 >=sci-chemistry/bodr-5 >=sci-chemistry/chemical-mime-data-0.1.94 >=sci-chemistry/openbabel-2.3.0:0= >=x11-libs/cairo-1.6.0 >=x11-libs/gdk-pixbuf-2.22.0 >=x11-libs/goffice-0.10.12 x11-libs/gtk+:3 >=x11-libs/libX11-1.0.0 virtual/glu gnumeric? ( >=app-office/gnumeric-1.12.42:= ) SLOT=0 SRC_URI=http://download.savannah.gnu.org/releases/gchemutils/0.14/gnome-chemistry-utils-0.14.17.tar.xz mirror://debian/pool/main/g/gnome-chemistry-utils/gnome-chemistry-utils_0.14.17-6.debian.tar.xz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=770de380949ddaa796a1987950af22ea diff --git a/metadata/md5-cache/sci-chemistry/gperiodic-3.0.3 b/metadata/md5-cache/sci-chemistry/gperiodic-3.0.3 index abd1217c9c22..203ae79473d9 100644 --- a/metadata/md5-cache/sci-chemistry/gperiodic-3.0.3 +++ b/metadata/md5-cache/sci-chemistry/gperiodic-3.0.3 @@ -4,11 +4,12 @@ DEPEND=sys-libs/ncurses:0 x11-libs/gtk+:2 x11-libs/cairo[X] DESCRIPTION=Periodic table application for Linux EAPI=7 HOMEPAGE=https://sourceforge.net/projects/gperiodic/ +INHERIT=toolchain-funcs xdg-utils IUSE=nls KEYWORDS=amd64 x86 LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:0 x11-libs/gtk+:2 x11-libs/cairo[X] SLOT=0 SRC_URI=https://downloads.sourceforge.net/project/gperiodic/gperiodic-3.0.3.tar.gz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=b6e7f6ff9487568ca79b429e8cd88deb diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2018.8-r1 b/metadata/md5-cache/sci-chemistry/gromacs-2018.8-r1 index 3f9f5984db02..499f9fee3bc2 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2018.8-r1 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2018.8-r1 @@ -1,5 +1,5 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( <sys-apps/hwloc-2:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 -DEFINED_PHASES=compile configure install postinst prepare pretend test +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( <sys-apps/hwloc-2:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 +DEFINED_PHASES=compile configure install postinst prepare pretend setup test DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=7 HOMEPAGE=http://www.gromacs.org/ @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) RESTRICT=!test? ( test ) SLOT=0/2018.8 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2018.8.tar.gz doc? ( http://ftp.gromacs.org/manual/manual-2018.8.pdf ) test? ( https://ftp.gromacs.org/regressiontests/regressiontests-2018.8.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=2da18d702851ad14795d094d2273c625 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=d48127cfce78800006e1f61bf76d409a diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r1 b/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r1 index 092e2f42e45a..b6a1d6d09f3f 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r1 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r1 @@ -1,5 +1,5 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 -DEFINED_PHASES=compile configure install postinst prepare pretend test +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 +DEFINED_PHASES=compile configure install postinst prepare pretend setup test DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=7 HOMEPAGE=http://www.gromacs.org/ @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) RESTRICT=!test? ( test ) SLOT=0/2019.6 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2019.6.tar.gz doc? ( http://ftp.gromacs.org/manual/manual-2019.6.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2019.6.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=7fae2949ebd729e7ed9edb68310f774d +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=b7596e0623695f863d15a7fa4a0c22e2 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r2 b/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r2 index f434c7cf42bc..d2b3d9b15f09 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r2 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2019.6-r2 @@ -1,5 +1,5 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 -DEFINED_PHASES=compile configure install postinst prepare pretend test +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 +DEFINED_PHASES=compile configure install postinst prepare pretend setup test DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=7 HOMEPAGE=http://www.gromacs.org/ @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) RESTRICT=!test? ( test ) SLOT=0/2019.6 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2019.6.tar.gz doc? ( http://ftp.gromacs.org/manual/manual-2019.6.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2019.6.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=c379b8f678e9d5b7fa05c670a32e9cc9 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=b87ea92194f8aed9b1bbe91710c30e77 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2020.4-r1 b/metadata/md5-cache/sci-chemistry/gromacs-2020.4-r1 index edf24c216ac6..f3fdfa278994 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2020.4-r1 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2020.4-r1 @@ -1,4 +1,4 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=7 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cud RESTRICT=!test? ( test ) SLOT=0/2020.4 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2020.4.tar.gz doc? ( https://ftp.gromacs.org/manual/manual-2020.4.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2020.4.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=bd0df586be77f14e14d10dc11d5de341 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=21d1ac914bbc37e40cd4b1b6fe358c84 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2020.7 b/metadata/md5-cache/sci-chemistry/gromacs-2020.7 index ebb0ab123b9a..b2617c390400 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2020.7 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2020.7 @@ -1,4 +1,4 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cud RESTRICT=!test? ( test ) SLOT=0/2020.7 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2020.7.tar.gz doc? ( https://ftp.gromacs.org/manual/manual-2020.7.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2020.7.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=1a99a89a7a55135d7defec7244745bf8 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=ae1132edc17dfca8693d1e3d3706d976 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2021.3-r1 b/metadata/md5-cache/sci-chemistry/gromacs-2021.3-r1 index daa153f30607..81b5cf580444 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2021.3-r1 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2021.3-r1 @@ -1,4 +1,4 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cud RESTRICT=!test? ( test ) SLOT=0/2021.3 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2021.3.tar.gz doc? ( https://ftp.gromacs.org/manual/manual-2021.3.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2021.3.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=4613df6759dd93dca329c398cd3bb902 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=90ffb93c5d4ea9cab1abcf146702e4f1 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2021.5 b/metadata/md5-cache/sci-chemistry/gromacs-2021.5 index 7d523a034f98..3752c07f7895 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2021.5 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2021.5 @@ -1,4 +1,4 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cud RESTRICT=!test? ( test ) SLOT=0/2021.5 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2021.5.tar.gz doc? ( https://ftp.gromacs.org/manual/manual-2021.5.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2021.5.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=b238e533403cc41b4a1e79be7dc32aea +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=bf29a291f2bd206a2cafbab0adcbc586 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2021.9999 b/metadata/md5-cache/sci-chemistry/gromacs-2021.9999 index f9fc9d1c906e..74061f87bc2b 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2021.9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2021.9999 @@ -1,4 +1,4 @@ -BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-vcs/git-1.8.2.1[curl] +BDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.14[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) lmfit? ( sci-libs/lmfit:= ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-vcs/git-1.8.2.1[curl] DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -11,5 +11,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) RESTRICT=!test? ( test ) SLOT=0/2021.9999 -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=891a260cb91f38989ae8a55d229be10b +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=a14e6ea8c188216b3b4de70e5aa6e83b diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2022 b/metadata/md5-cache/sci-chemistry/gromacs-2022 index 6acad4f8d61f..e8e8d6ede5bb 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2022 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2022 @@ -1,4 +1,4 @@ -BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig clang? ( >=sys-devel/clang-6:* ) build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) +BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig clang? ( >=sys-devel/clang-6:* ) build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cud RESTRICT=!test? ( test ) SLOT=0/2022 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2022.tar.gz doc? ( https://ftp.gromacs.org/manual/manual-2022.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2022.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=b1a6a2c64a9f74fce4b3caf895b7a069 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=e88acab346259c04a503d0f12143bd45 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2022.1 b/metadata/md5-cache/sci-chemistry/gromacs-2022.1 index 11952eeb02c0..e09b0655b15d 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2022.1 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2022.1 @@ -1,16 +1,16 @@ -BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig clang? ( >=sys-devel/clang-6:* ) build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) +BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig clang? ( >=sys-devel/clang-6:* ) build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 HOMEPAGE=http://www.gromacs.org/ INHERIT=bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils IUSE=blas clang clang-cuda cuda +custom-cflags +doc build-manual double-precision +fftw +gmxapi +gmxapi-legacy +hwloc lapack mkl mpi +offensive opencl openmp +python +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos +KEYWORDS=~amd64 ~arm ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD ) RDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) <sci-chemistry/dssp-4 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) cuda? ( !opencl ) clang-cuda? ( clang cuda ) mkl? ( !blas !fftw !lapack ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) RESTRICT=!test? ( test ) SLOT=0/2022.1 SRC_URI=http://ftp.gromacs.org/gromacs/gromacs-2022.1.tar.gz doc? ( https://ftp.gromacs.org/manual/manual-2022.1.pdf ) test? ( http://ftp.gromacs.org/regressiontests/regressiontests-2022.1.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=b1a6a2c64a9f74fce4b3caf895b7a069 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=342b88558e2272cae9c832677150495e diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2022.9999 b/metadata/md5-cache/sci-chemistry/gromacs-2022.9999 index d7c549c4d523..92825d087b5a 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2022.9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2022.9999 @@ -1,4 +1,4 @@ -BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-vcs/git-1.8.2.1[curl] +BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-vcs/git-1.8.2.1[curl] DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -11,5 +11,5 @@ RDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profile REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) RESTRICT=!test? ( test ) SLOT=0/2022.9999 -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=411759b5d1aafba82ba53c7034547a5c +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=3699f1eb5ff87fdea0c92b879c368afe diff --git a/metadata/md5-cache/sci-chemistry/gromacs-9999 b/metadata/md5-cache/sci-chemistry/gromacs-9999 index 17cbb01448c8..ff623c3b2bc5 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-9999 @@ -1,4 +1,4 @@ -BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-vcs/git-1.8.2.1[curl] +BDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profiler] ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0= ) hwloc? ( sys-apps/hwloc:= ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= >=dev-cpp/muParser-2.3:= python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) virtual/pkgconfig build-manual? ( app-doc/doxygen python_single_target_python3_8? ( dev-python/sphinx[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/sphinx[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/sphinx[python_targets_python3_10(-)] ) media-gfx/mscgen media-gfx/graphviz dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-vcs/git-1.8.2.1[curl] DEFINED_PHASES=compile configure install postinst prepare pretend setup test unpack DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=8 @@ -11,5 +11,5 @@ RDEPEND=blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-11[profile REQUIRED_USE=|| ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) RESTRICT=!test? ( test ) SLOT=0/9999 -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=411759b5d1aafba82ba53c7034547a5c +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d cuda 15edbf8fd9df209322f42c06ecf59a96 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=3699f1eb5ff87fdea0c92b879c368afe diff --git a/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1 b/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1 index 9ab1382c0cd4..e3ff9173771b 100644 --- a/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1 +++ b/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1 @@ -4,10 +4,11 @@ DEPEND=sci-libs/libpdb++ DESCRIPTION=An open source implementation of sci-chemistry/dssp EAPI=7 HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html +INHERIT=toolchain-funcs KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=BSD RDEPEND=sci-libs/libpdb++ SLOT=0 SRC_URI=mirror://gentoo/ksdssp-040728.shar -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=d9484bfa46cce35d2317ffe1b0a890a9 diff --git a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4 b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4 index 1f9948f4dc79..b3eca004030e 100644 --- a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4 +++ b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) RESTRICT=test SLOT=0 SRC_URI=mirror://pypi/m/mdtraj/mdtraj-1.9.4.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=dbdcffa8a3d57c4db3c130a0096698ea diff --git a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.7 b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.7 index 45859716cdeb..f70b9b596d4f 100644 --- a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.7 +++ b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.7 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://pypi/m/mdtraj/mdtraj-1.9.7.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=34e3e44700bff65c157b4746eba8555a diff --git a/metadata/md5-cache/sci-chemistry/modeller-9.25 b/metadata/md5-cache/sci-chemistry/modeller-9.25 index d55791da6556..9f57dfe3cdc3 100644 --- a/metadata/md5-cache/sci-chemistry/modeller-9.25 +++ b/metadata/md5-cache/sci-chemistry/modeller-9.25 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=mirror SLOT=0 SRC_URI=https://salilab.org/modeller/9.25/modeller-9.25.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=b95991329a6a5e37067102edc03fc9c6 diff --git a/metadata/md5-cache/sci-chemistry/molden-5.5 b/metadata/md5-cache/sci-chemistry/molden-5.5 index 7675b1385f7e..a20ab92f6158 100644 --- a/metadata/md5-cache/sci-chemistry/molden-5.5 +++ b/metadata/md5-cache/sci-chemistry/molden-5.5 @@ -10,5 +10,5 @@ LICENSE=MOLDEN RDEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) virtual/fortran SLOT=0 SRC_URI=ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden5.5.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4a33c9008e5ee30cb8840a3fdc24df2b preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 28f0f3c0226306ec5f49e13bf851f171 estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4fbbbc98f236f1b43acd99476bc3cd85 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=e001bc09cd538ab64d80eae49115c766 diff --git a/metadata/md5-cache/sci-chemistry/molden-6.9 b/metadata/md5-cache/sci-chemistry/molden-6.9 index 339d9d86af63..1ebeae68fe1c 100644 --- a/metadata/md5-cache/sci-chemistry/molden-6.9 +++ b/metadata/md5-cache/sci-chemistry/molden-6.9 @@ -4,11 +4,12 @@ DEPEND=x11-libs/libXmu opengl? ( media-libs/freeglut virtual/opengl virtual/glu DESCRIPTION=Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac EAPI=8 HOMEPAGE=https://www.theochem.ru.nl/molden/ +INHERIT=desktop fortran-2 flag-o-matic toolchain-funcs IUSE=opengl KEYWORDS=~amd64 ~x86 LICENSE=MOLDEN RDEPEND=x11-libs/libXmu opengl? ( media-libs/freeglut virtual/opengl virtual/glu ) virtual/fortran SLOT=0 SRC_URI=ftp://ftp.science.ru.nl/pub/Molden/molden6.9.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=14e78d228d63f19a1aab1713f81ff6c5 diff --git a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 index 78c259cde723..836433c4da65 100644 --- a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 +++ b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 @@ -3,10 +3,11 @@ DEFINED_PHASES=compile configure install prepare DESCRIPTION=Molecular dynamics simulations platform EAPI=7 HOMEPAGE=http://www.ccp5.ac.uk/moldy/moldy.html +INHERIT=toolchain-funcs IUSE=doc KEYWORDS=amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=GPL-2 SLOT=0 SRC_URI=ftp://ftp.earth.ox.ac.uk/pub/keith/moldy-2.16e.tar.gz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=09d7af6f95b5462140a4f8f61ead5fa0 diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1 b/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1 index 0f908ea641a0..99a6359c3f33 100644 --- a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1 +++ b/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1 @@ -1,17 +1,17 @@ -BDEPEND=doc? ( app-doc/doxygen ) dev-util/ninja >=dev-util/cmake-3.20.5 test? ( x11-base/xorg-server[xvfb] x11-apps/xhost ) +BDEPEND=doc? ( app-doc/doxygen ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 test? ( x11-base/xorg-server[xvfb] x11-apps/xhost ) DEFINED_PHASES=compile configure install prepare test -DEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) net-libs/cppzmq:0= ) +DEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_targets_python3_11? ( >=dev-lang/python-3.11.0_beta1-r1:3.11 ) net-libs/cppzmq:0= ) DESCRIPTION=Abstract, manage and coordinate execution of tasks EAPI=7 HOMEPAGE=https://www.openchemistry.org/projects/molequeue/ INHERIT=cmake python-r1 virtualx -IUSE=+client doc server test +zeromq python_targets_python3_8 python_targets_python3_9 test +IUSE=+client doc server test +zeromq python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 test KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=BSD -RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) net-libs/cppzmq:0= ) -REQUIRED_USE=server? ( client ) test? ( server ) zeromq? ( || ( python_targets_python3_8 python_targets_python3_9 ) ) +RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_targets_python3_11? ( >=dev-lang/python-3.11.0_beta1-r1:3.11 ) net-libs/cppzmq:0= ) +REQUIRED_USE=server? ( client ) test? ( server ) zeromq? ( || ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 ) ) RESTRICT=test SLOT=0 SRC_URI=https://github.com/OpenChemistry/molequeue/archive/0.9.0.tar.gz -> molequeue-0.9.0.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 virtualx 975d49ff3b3f451efe7a95f230532135 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=dd52a07ec2949eea740c8d0996a84e76 +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb virtualx 975d49ff3b3f451efe7a95f230532135 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=e2f5be501f8ecc33d529ef6371edbe5d diff --git a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 index 9172d0224355..2c2776554a41 100644 --- a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 +++ b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 @@ -3,10 +3,11 @@ DEPEND=|| ( ( media-libs/mesa[X(+)] x11-libs/libGLw ) media-libs/mesa[motif,X(+) DESCRIPTION=Publication-quality molecular visualization package EAPI=7 HOMEPAGE=http://www.csb.yale.edu/userguides/graphics/molmol/molmol_descrip.html http://pjf.net/science/molmol.html +INHERIT=desktop prefix toolchain-funcs KEYWORDS=amd64 ~ppc x86 ~amd64-linux ~x86-linux LICENSE=molmol RDEPEND=|| ( ( media-libs/mesa[X(+)] x11-libs/libGLw ) media-libs/mesa[motif,X(+)] ) media-libs/libpng:0= media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg:0 x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo SLOT=0 SRC_URI=ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-src.tar.gz ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-doc.tar.gz https://dev.gentoo.org/~soap/distfiles/molmol-patches.tbz2 https://dev.gentoo.org/~pacho/molmol/molmol.png -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 4a33c9008e5ee30cb8840a3fdc24df2b prefix eab3c99d77fe00506c109c8a736186f7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa multilib 4fbbbc98f236f1b43acd99476bc3cd85 prefix eab3c99d77fe00506c109c8a736186f7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=852c119d8aa483dc22f3d4b56210cf3c diff --git a/metadata/md5-cache/sci-chemistry/molsketch-0.4.1-r1 b/metadata/md5-cache/sci-chemistry/molsketch-0.4.1-r1 deleted file mode 100644 index b943ed62a66f..000000000000 --- a/metadata/md5-cache/sci-chemistry/molsketch-0.4.1-r1 +++ /dev/null @@ -1,14 +0,0 @@ -BDEPEND=dev-util/ninja >=dev-util/cmake-3.20.5 -DEFINED_PHASES=compile configure install postinst postrm prepare test -DEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 -DESCRIPTION=A drawing tool for 2D molecular structures -EAPI=7 -HOMEPAGE=http://molsketch.sourceforge.net/ -INHERIT=cmake qmake-utils xdg-utils -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=GPL-2 -RDEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 -SLOT=0 -SRC_URI=mirror://sourceforge/project/molsketch/Molsketch/Beryllium-7%200.4.1/Molsketch-0.4.1-src.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 qmake-utils 59420c906278d16deaaa629f9d115707 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=8f6340089860392daa050ce98d1044b0 diff --git a/metadata/md5-cache/sci-chemistry/molsketch-0.7.2 b/metadata/md5-cache/sci-chemistry/molsketch-0.7.2 deleted file mode 100644 index 2742109b1359..000000000000 --- a/metadata/md5-cache/sci-chemistry/molsketch-0.7.2 +++ /dev/null @@ -1,14 +0,0 @@ -BDEPEND=dev-util/ninja >=dev-util/cmake-3.20.5 -DEFINED_PHASES=compile configure install postinst postrm preinst prepare test -DEPEND=>=sci-chemistry/openbabel-3 dev-qt/linguist-tools:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 -DESCRIPTION=A drawing tool for 2D molecular structures -EAPI=8 -HOMEPAGE=http://molsketch.sourceforge.net/ -INHERIT=cmake xdg -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=GPL-2 -RDEPEND=>=sci-chemistry/openbabel-3 dev-qt/linguist-tools:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 -SLOT=0 -SRC_URI=mirror://sourceforge/project/molsketch/Molsketch/Molsketch-0.7.2-src.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=5f152a068df9ee1d5a978514f40d8402 diff --git a/metadata/md5-cache/sci-chemistry/molsketch-0.7.2-r1 b/metadata/md5-cache/sci-chemistry/molsketch-0.7.2-r1 new file mode 100644 index 000000000000..7078785c4e6e --- /dev/null +++ b/metadata/md5-cache/sci-chemistry/molsketch-0.7.2-r1 @@ -0,0 +1,14 @@ +BDEPEND=>=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 +DEFINED_PHASES=compile configure install postinst postrm preinst prepare test +DEPEND=>=sci-chemistry/openbabel-3:= dev-qt/linguist-tools:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 +DESCRIPTION=A drawing tool for 2D molecular structures +EAPI=8 +HOMEPAGE=http://molsketch.sourceforge.net/ +INHERIT=cmake xdg +KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux +LICENSE=GPL-2 +RDEPEND=>=sci-chemistry/openbabel-3:= dev-qt/linguist-tools:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 +SLOT=0 +SRC_URI=mirror://sourceforge/project/molsketch/Molsketch/Molsketch-0.7.2-src.tar.gz +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=52d5cde024c8f08f833c2a6862f1c0f7 diff --git a/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1 b/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1 index 17fc31d7e5a5..e79669935e2b 100644 --- a/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1 +++ b/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1 @@ -4,11 +4,12 @@ DEPEND=dev-libs/libf2c virtual/fortran DESCRIPTION=Autotooled, updated version of a powerful, fast semi-empirical package EAPI=8 HOMEPAGE=https://sourceforge.net/projects/mopac7/ +INHERIT=autotools fortran-2 flag-o-matic toolchain-funcs IUSE=gmxmopac7 KEYWORDS=amd64 ~ppc x86 ~amd64-linux LICENSE=public-domain RDEPEND=dev-libs/libf2c virtual/fortran SLOT=0 SRC_URI=http://www.bioinformatics.org/ghemical/download/current/mopac7-1.15.tar.gz http://wwwuser.gwdg.de/~ggroenh/qmmm/mopac/dcart.f http://wwwuser.gwdg.de/~ggroenh/qmmm/mopac/gmxmop.f -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=b003c0476ccd7ad71ed1861aaad5be2e diff --git a/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4 b/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4 index df89a144576d..379d18aa95fd 100644 --- a/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4 +++ b/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4 @@ -4,11 +4,12 @@ DEPEND=virtual/blas virtual/lapack mpi? ( virtual/mpi[cxx] ) tk? ( dev-lang/tk:0 DESCRIPTION=The Massively Parallel Quantum Chemistry Program EAPI=8 HOMEPAGE=http://www.mpqc.org/ +INHERIT=autotools toolchain-funcs IUSE=doc mpi threads tk KEYWORDS=~amd64 ~ppc ~ppc64 ~x86 LICENSE=GPL-2 RDEPEND=virtual/blas virtual/lapack mpi? ( virtual/mpi[cxx] ) tk? ( dev-lang/tk:0 ) SLOT=0 SRC_URI=mirror://sourceforge/mpqc/mpqc-2.3.1.tar.bz2 -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=eba936ba87f329464c8bcdaca1a0c1bf diff --git a/metadata/md5-cache/sci-chemistry/mustang-3.2.2 b/metadata/md5-cache/sci-chemistry/mustang-3.2.2 index 223256830c25..824c8d2b2e0c 100644 --- a/metadata/md5-cache/sci-chemistry/mustang-3.2.2 +++ b/metadata/md5-cache/sci-chemistry/mustang-3.2.2 @@ -2,9 +2,10 @@ DEFINED_PHASES=compile install postinst prepare test DESCRIPTION=MUltiple STructural AligNment AlGorithm EAPI=8 HOMEPAGE=http://www.csse.monash.edu.au/~karun/Site/mustang.html +INHERIT=toolchain-funcs KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=BSD SLOT=0 SRC_URI=http://www.csse.monash.edu.au/~karun/mustang/mustang_v3.2.2.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=3468cf6dad6f5b3fd8840e0757ac9dcc diff --git a/metadata/md5-cache/sci-chemistry/namd-2.10 b/metadata/md5-cache/sci-chemistry/namd-2.10 index 14970f0f48c3..59b47f8e94ea 100644 --- a/metadata/md5-cache/sci-chemistry/namd-2.10 +++ b/metadata/md5-cache/sci-chemistry/namd-2.10 @@ -10,5 +10,5 @@ RDEPEND=>=sys-cluster/charm-6.5.1-r2 sci-libs/fftw:3.0 dev-lang/tcl:0= RESTRICT=fetch SLOT=0 SRC_URI=NAMD_2.10_Source.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4a33c9008e5ee30cb8840a3fdc24df2b preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 28f0f3c0226306ec5f49e13bf851f171 estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4fbbbc98f236f1b43acd99476bc3cd85 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=9ececc89d028148efb247f92866214f8 diff --git a/metadata/md5-cache/sci-chemistry/nmrglue-0.7 b/metadata/md5-cache/sci-chemistry/nmrglue-0.7 index f16530cbc0e1..0398cfe10651 100644 --- a/metadata/md5-cache/sci-chemistry/nmrglue-0.7 +++ b/metadata/md5-cache/sci-chemistry/nmrglue-0.7 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/jjhelmus/nmrglue/releases/download/v0.7/nmrglue-0.7.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=197459a7eef5261de4cf3cb0315254ac diff --git a/metadata/md5-cache/sci-chemistry/numbat-0.999-r2 b/metadata/md5-cache/sci-chemistry/numbat-0.999-r2 index d8339e2b29ea..fda2c1efc035 100644 --- a/metadata/md5-cache/sci-chemistry/numbat-0.999-r2 +++ b/metadata/md5-cache/sci-chemistry/numbat-0.999-r2 @@ -4,10 +4,11 @@ DEPEND=gnome-base/libglade:2.0 sci-libs/gsl:= x11-libs/gtk+:2 DESCRIPTION=New user-friendly method built for automatic dX-tensor determination EAPI=7 HOMEPAGE=http://www.nmr.chem.uu.nl/~christophe/numbat.html +INHERIT=autotools KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=GPL-3 RDEPEND=gnome-base/libglade:2.0 sci-libs/gsl:= x11-libs/gtk+:2 sci-chemistry/molmol sci-chemistry/pymol sci-visualization/gnuplot SLOT=0 SRC_URI=http://comp-bio.anu.edu.au/private/downloads/Numbat/Numbat-0.999.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=df1e675b0c125ce11088c4e66c658685 diff --git a/metadata/md5-cache/sci-chemistry/openbabel-3.1.1_p20210225 b/metadata/md5-cache/sci-chemistry/openbabel-3.1.1_p20210225 index 92d1350f2452..eb67fc649375 100644 --- a/metadata/md5-cache/sci-chemistry/openbabel-3.1.1_p20210225 +++ b/metadata/md5-cache/sci-chemistry/openbabel-3.1.1_p20210225 @@ -1,5 +1,5 @@ -BDEPEND=dev-lang/perl doc? ( app-doc/doxygen dev-texlive/texlive-latex ) perl? ( >=dev-lang/swig-2 ) python? ( >=dev-lang/swig-2 ) test? ( dev-lang/python ) dev-util/ninja >=dev-util/cmake-3.20.5 -DEFINED_PHASES=compile configure install postinst postrm prepare setup test +BDEPEND=dev-lang/perl doc? ( app-doc/doxygen dev-texlive/texlive-latex ) perl? ( >=dev-lang/swig-2 ) python? ( >=dev-lang/swig-2 ) test? ( dev-lang/python ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 +DEFINED_PHASES=compile configure install postinst postrm prepare pretend setup test DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sys-libs/zlib:= inchi? ( sci-libs/inchi ) json? ( >=dev-libs/rapidjson-1.1.0 ) png? ( x11-libs/cairo ) python? ( python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) ) wxwidgets? ( x11-libs/wxGTK:3.0-gtk3[X] ) perl? ( dev-lang/perl ) DESCRIPTION=Interconverts file formats used in molecular modeling EAPI=8 @@ -13,5 +13,5 @@ REQUIRED_USE=python? ( || ( python_targets_python3_8 python_targets_python3_9 py RESTRICT=!test? ( test ) SLOT=0/7.0.0 SRC_URI=https://github.com/openbabel/openbabel/archive/08e23f39b0cc39b4eebd937a5a2ffc1a7bac3e1b.tar.gz -> openbabel-3.1.1_p20210225.tar.gz https://openbabel.org/docs/dev/_static/babel130.png -> openbabel.png http://openbabel.org/OBTitle.jpg -> openbabel.jpg -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 desktop c0d27bf73aa08ca05b663dbd31fbef28 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 perl-functions fea344a91ebf37efadf172c6a3de5a72 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=847404493940203d4881928db49aafcd +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d desktop 22952d8f27cac191d75529d4c38e6bfa flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 perl-functions fea344a91ebf37efadf172c6a3de5a72 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=219030e81d976d743129dc077888bef8 diff --git a/metadata/md5-cache/sci-chemistry/openbabel-9999 b/metadata/md5-cache/sci-chemistry/openbabel-9999 index c7e8e2af3ebf..7b31600d5721 100644 --- a/metadata/md5-cache/sci-chemistry/openbabel-9999 +++ b/metadata/md5-cache/sci-chemistry/openbabel-9999 @@ -1,5 +1,5 @@ -BDEPEND=dev-lang/perl doc? ( app-doc/doxygen dev-texlive/texlive-latex ) perl? ( >=dev-lang/swig-2 ) python? ( >=dev-lang/swig-2 ) test? ( dev-lang/python ) dev-util/ninja >=dev-util/cmake-3.20.5 >=dev-vcs/git-1.8.2.1[curl] -DEFINED_PHASES=compile configure install postinst postrm prepare setup test unpack +BDEPEND=dev-lang/perl doc? ( app-doc/doxygen dev-texlive/texlive-latex ) perl? ( >=dev-lang/swig-2 ) python? ( >=dev-lang/swig-2 ) test? ( dev-lang/python ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 >=dev-vcs/git-1.8.2.1[curl] +DEFINED_PHASES=compile configure install postinst postrm prepare pretend setup test unpack DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sys-libs/zlib:= inchi? ( sci-libs/inchi ) json? ( >=dev-libs/rapidjson-1.1.0 ) png? ( x11-libs/cairo ) python? ( python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) ) wxwidgets? ( x11-libs/wxGTK:3.0-gtk3[X] ) perl? ( dev-lang/perl ) DESCRIPTION=Interconverts file formats used in molecular modeling EAPI=8 @@ -13,5 +13,5 @@ REQUIRED_USE=python? ( || ( python_targets_python3_8 python_targets_python3_9 py RESTRICT=!test? ( test ) SLOT=0/7.0.0 SRC_URI=https://openbabel.org/docs/dev/_static/babel130.png -> openbabel.png http://openbabel.org/OBTitle.jpg -> openbabel.jpg -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 desktop c0d27bf73aa08ca05b663dbd31fbef28 flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 perl-functions fea344a91ebf37efadf172c6a3de5a72 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=e89db4909d6891cd751de30932b64030 +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d desktop 22952d8f27cac191d75529d4c38e6bfa flag-o-matic a3abd6002fafb3022597be6b8d01f88b git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 perl-functions fea344a91ebf37efadf172c6a3de5a72 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=b125d73885867c3083da967d79d004a0 diff --git a/metadata/md5-cache/sci-chemistry/pdbcat-1.3-r1 b/metadata/md5-cache/sci-chemistry/pdbcat-1.3-r1 index 04bd9990bc44..c60d74e2fe33 100644 --- a/metadata/md5-cache/sci-chemistry/pdbcat-1.3-r1 +++ b/metadata/md5-cache/sci-chemistry/pdbcat-1.3-r1 @@ -1,4 +1,4 @@ -BDEPEND=dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=>=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install prepare test DESCRIPTION=Manipulate and process PDB files using tools such as Perl, awk, etc EAPI=8 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=free-noncomm SLOT=0 SRC_URI=http://www.ks.uiuc.edu/Development/MDTools/pdbcat/files/pdbcat-1.3.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=468efdc0276a4b9606711e3ba7fc6d8f diff --git a/metadata/md5-cache/sci-chemistry/pdbmat-3.89-r1 b/metadata/md5-cache/sci-chemistry/pdbmat-3.89-r1 index f1fa89eaec7a..3adb303d660d 100644 --- a/metadata/md5-cache/sci-chemistry/pdbmat-3.89-r1 +++ b/metadata/md5-cache/sci-chemistry/pdbmat-3.89-r1 @@ -1,4 +1,4 @@ -BDEPEND=dev-util/ninja >=dev-util/cmake-3.20.5 virtual/fortran +BDEPEND=>=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 virtual/fortran DEFINED_PHASES=compile configure install prepare setup test DEPEND=virtual/fortran DESCRIPTION=Calculate Tirion's model from pdb structures @@ -11,5 +11,5 @@ LICENSE=CeCILL-2 RDEPEND=virtual/fortran SLOT=0 SRC_URI=http://ecole.modelisation.free.fr/enm2011.tar.gz -> pdbmat-3.89.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=d9c289801412f2ea4102c59abe9d1df7 diff --git a/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1 b/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1 index 05031fee6936..6d2f2962963f 100644 --- a/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1 +++ b/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1 @@ -3,11 +3,12 @@ DEPEND=x11-libs/libXext x11-libs/libXmu x11-libs/libXt x11-libs/libX11 X? ( >=x1 DESCRIPTION=Prepares molecular kinemages from PDB-format coordinate files EAPI=6 HOMEPAGE=http://kinemage.biochem.duke.edu/software/prekin.php +INHERIT=toolchain-funcs IUSE=X KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux LICENSE=richardson RDEPEND=x11-libs/libXext x11-libs/libXmu x11-libs/libXt x11-libs/libX11 X? ( >=x11-libs/motif-2.3:0= ) SLOT=0 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/prekin/prekin.6.51.081122.src.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=f9ebfd63a2e82c2f066b1d7467a37c45 diff --git a/metadata/md5-cache/sci-chemistry/probe-2.13.110909 b/metadata/md5-cache/sci-chemistry/probe-2.13.110909 index 862104198f25..359e9192d7e3 100644 --- a/metadata/md5-cache/sci-chemistry/probe-2.13.110909 +++ b/metadata/md5-cache/sci-chemistry/probe-2.13.110909 @@ -3,9 +3,10 @@ DEFINED_PHASES=configure install DESCRIPTION=Evaluates atomic packing within or between molecules EAPI=7 HOMEPAGE=http://kinemage.biochem.duke.edu/software/probe.php +INHERIT=toolchain-funcs KEYWORDS=amd64 ~ppc x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=richardson SLOT=0 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/probe/probe.2.13.110909.src.zip -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=1bd078b7f26db9aec6132b34c1c558ca diff --git a/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3 b/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3 index 621057c74449..34d925cc976e 100644 --- a/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3 +++ b/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3 @@ -11,5 +11,5 @@ RDEPEND=app-shells/tcsh virtual/fortran RESTRICT=fetch SLOT=0 SRC_URI=procheck-3.5.4.tar.gz procheck-3.5.4-README doc? ( procheck-3.5.4-manual.tar.gz ) -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff fortran-2 72d28c6872beb1e7cb99684b0ae4715d ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4a33c9008e5ee30cb8840a3fdc24df2b preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 28f0f3c0226306ec5f49e13bf851f171 estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff fortran-2 72d28c6872beb1e7cb99684b0ae4715d ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4fbbbc98f236f1b43acd99476bc3cd85 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb vcs-clean d271b7bc7e6a009758d7d4ef749174e3 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=b86e2c5d873fef674161fd10b7135120 diff --git a/metadata/md5-cache/sci-chemistry/propka-3.2.0 b/metadata/md5-cache/sci-chemistry/propka-3.2.0 index 2808a1fded70..e45e21a6697a 100644 --- a/metadata/md5-cache/sci-chemistry/propka-3.2.0 +++ b/metadata/md5-cache/sci-chemistry/propka-3.2.0 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://pypi/p/propka/propka-3.2.0.tar.gz -_eclasses_=distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=bd048f5978b21207dd0a67d80964171d diff --git a/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2 b/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2 index e7e28913168d..3c271b24b0d4 100644 --- a/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2 +++ b/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2 @@ -4,6 +4,7 @@ DEPEND=!sci-visualization/extrema virtual/blas virtual/lapack >=sci-libs/libint- DESCRIPTION=Suite for ab initio quantum chemistry computing various molecular properties EAPI=7 HOMEPAGE=http://www.psicode.org/ +INHERIT=autotools fortran-2 toolchain-funcs IUSE=test KEYWORDS=amd64 x86 LICENSE=GPL-2 @@ -11,5 +12,5 @@ RDEPEND=!sci-visualization/extrema virtual/blas virtual/lapack >=sci-libs/libint RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/psicode/psi-3.4.0.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 fortran-2 72d28c6872beb1e7cb99684b0ae4715d gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 fortran-2 72d28c6872beb1e7cb99684b0ae4715d gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=ecd9eddd7cba15554c7599004f94761a diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.5.0 b/metadata/md5-cache/sci-chemistry/pymol-2.5.0 index 1e7e9faf7cdd..5cfe389e55cd 100644 --- a/metadata/md5-cache/sci-chemistry/pymol-2.5.0 +++ b/metadata/md5-cache/sci-chemistry/pymol-2.5.0 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=mirror SLOT=0 SRC_URI=https://dev.gentoo.org/~pacho/pymol/pymol-1.8.4.0.png.xz https://github.com/schrodinger/pymol-open-source/archive/v2.5.0.tar.gz -> pymol-2.5.0.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 distutils-r1 3b871cf4724e3abc9b4ff059289f0d45 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 5dc84801daa87406aafaf535cb947a64 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa distutils-r1 10a93585889c3ca7651cbcd2ee831e47 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=7bb4d93e554e41f93f1e3959c541e38c diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r1 b/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r1 new file mode 100644 index 000000000000..6f7a050091e2 --- /dev/null +++ b/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r1 @@ -0,0 +1,16 @@ +BDEPEND=python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) +DEFINED_PHASES=compile configure install postinst postrm preinst prepare test +DEPEND=dev-libs/msgpack[cxx] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) +DESCRIPTION=A Python-extensible molecular graphics system +EAPI=8 +HOMEPAGE=https://www.pymol.org/ +INHERIT=desktop flag-o-matic xdg distutils-r1 +IUSE=+netcdf web python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 +KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos +LICENSE=BitstreamVera BSD freedist HPND OFL public-domain UoI-NCSA +RDEPEND=dev-libs/msgpack[cxx] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) sci-chemistry/chemical-mime-data python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) +REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) +SLOT=0 +SRC_URI=https://dev.gentoo.org/~pacho/pymol/pymol-1.8.4.0.png.xz https://github.com/schrodinger/pymol-open-source/archive/v2.5.0.tar.gz -> pymol-2.5.0.tar.gz +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa distutils-r1 10a93585889c3ca7651cbcd2ee831e47 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multibuild d26d81f242cb193d899a72bca423d0bd multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=8320b4b690e8f97a7400d54894534d09 diff --git a/metadata/md5-cache/sci-chemistry/raster3d-3.0.6 b/metadata/md5-cache/sci-chemistry/raster3d-3.0.6 index e0189959a1e2..baa18d22f0d1 100644 --- a/metadata/md5-cache/sci-chemistry/raster3d-3.0.6 +++ b/metadata/md5-cache/sci-chemistry/raster3d-3.0.6 @@ -4,11 +4,12 @@ DEPEND=gd? ( media-libs/gd[jpeg,png] ) tiff? ( media-libs/tiff:0 ) virtual/fortr DESCRIPTION=Generation high quality raster images of proteins or other molecules EAPI=7 HOMEPAGE=http://www.bmsc.washington.edu/raster3d/raster3d.html +INHERIT=fortran-2 flag-o-matic prefix toolchain-funcs IUSE=gd tiff KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux LICENSE=Artistic-2 RDEPEND=gd? ( media-libs/gd[jpeg,png] ) tiff? ( media-libs/tiff:0 ) virtual/fortran SLOT=0 SRC_URI=http://www.bmsc.washington.edu/raster3d/Raster3D_3.0-6.tar.gz -> Raster3D_3.0-6.tar -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4a33c9008e5ee30cb8840a3fdc24df2b prefix eab3c99d77fe00506c109c8a736186f7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4fbbbc98f236f1b43acd99476bc3cd85 prefix eab3c99d77fe00506c109c8a736186f7 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=9be75cc0fea7287e4d0805dc7c90da7f diff --git a/metadata/md5-cache/sci-chemistry/suitename-0.3.070628 b/metadata/md5-cache/sci-chemistry/suitename-0.3.070628 index 3bf065fa4392..43cf64493e31 100644 --- a/metadata/md5-cache/sci-chemistry/suitename-0.3.070628 +++ b/metadata/md5-cache/sci-chemistry/suitename-0.3.070628 @@ -2,9 +2,10 @@ DEFINED_PHASES=compile configure install DESCRIPTION=The ROC RNA Ontology nomenclature and conformer-list development EAPI=7 HOMEPAGE=http://kinemage.biochem.duke.edu/software/suitename.php +INHERIT=toolchain-funcs KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=richardson SLOT=0 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/suitename/suitename.0.3.070628.src.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=33cf8423353d46b4e660655c6d0743c1 diff --git a/metadata/md5-cache/sci-chemistry/surf-1.0 b/metadata/md5-cache/sci-chemistry/surf-1.0 index 805ab86e8584..c6c3fd549035 100644 --- a/metadata/md5-cache/sci-chemistry/surf-1.0 +++ b/metadata/md5-cache/sci-chemistry/surf-1.0 @@ -2,10 +2,11 @@ DEFINED_PHASES=configure install DESCRIPTION=Solvent accesible Surface calculator EAPI=7 HOMEPAGE=http://www.ks.uiuc.edu/ +INHERIT=toolchain-funcs KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=SURF RDEPEND=!www-client/surf SLOT=0 SRC_URI=http://www.ks.uiuc.edu/Research/vmd/extsrcs/surf.tar.Z -> surf-1.0.tar.Z -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=6792fb81e0a549773b6d73e1ca6fe94c diff --git a/metadata/md5-cache/sci-chemistry/theseus-3.3.0-r1 b/metadata/md5-cache/sci-chemistry/theseus-3.3.0-r1 index 1539ba4ff5d3..b5b84074e8e5 100644 --- a/metadata/md5-cache/sci-chemistry/theseus-3.3.0-r1 +++ b/metadata/md5-cache/sci-chemistry/theseus-3.3.0-r1 @@ -4,11 +4,12 @@ DEPEND=sci-libs/gsl:= || ( sci-biology/clustalw:2 sci-biology/kalign sci-biology DESCRIPTION=Maximum likelihood superpositioning and analysis of macromolecular structures EAPI=8 HOMEPAGE=http://www.theseus3d.org/ +INHERIT=toolchain-funcs IUSE=examples KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=GPL-3 RDEPEND=sci-libs/gsl:= || ( sci-biology/clustalw:2 sci-biology/kalign sci-biology/mafft sci-biology/muscle sci-biology/probcons sci-biology/t-coffee ) SLOT=0 SRC_URI=http://www.theseus3d.org/src/theseus_3.3.0.tar.gz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=73500632580c5b555fb757d3fbbc6005 diff --git a/metadata/md5-cache/sci-chemistry/threeV-1.2-r1 b/metadata/md5-cache/sci-chemistry/threeV-1.2-r1 index e0e12cb14069..bc5718d5b00e 100644 --- a/metadata/md5-cache/sci-chemistry/threeV-1.2-r1 +++ b/metadata/md5-cache/sci-chemistry/threeV-1.2-r1 @@ -2,10 +2,11 @@ DEFINED_PHASES=install prepare DESCRIPTION=3V: Voss Volume Voxelator EAPI=6 HOMEPAGE=http://geometry.molmovdb.org/3v/ +INHERIT=toolchain-funcs KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=GPL-2 PDEPEND=sci-chemistry/msms-bin SLOT=0 SRC_URI=http://geometry.molmovdb.org/3v/3v-1.2.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=5ca6079a9193f10a01a27b188fadd411 diff --git a/metadata/md5-cache/sci-chemistry/tinker-8.2.1 b/metadata/md5-cache/sci-chemistry/tinker-8.2.1 index 45fc2707340b..04f05ccd217f 100644 --- a/metadata/md5-cache/sci-chemistry/tinker-8.2.1 +++ b/metadata/md5-cache/sci-chemistry/tinker-8.2.1 @@ -1,4 +1,4 @@ -DEFINED_PHASES=compile install preinst prepare setup test +DEFINED_PHASES=compile install preinst prepare pretend setup test DEPEND=>=sci-libs/fftw-3.2.2-r1[fortran,threads] dev-libs/maloc !sys-apps/bar !dev-util/diffuse >=virtual/jre-1.6 >=virtual/jdk-1.6 virtual/pkgconfig virtual/fortran java? ( >=dev-java/java-config-2.2.0-r3 ) DESCRIPTION=Molecular modeling package that includes force fields, such as AMBER and CHARMM EAPI=6 @@ -11,5 +11,5 @@ RDEPEND=>=sci-libs/fftw-3.2.2-r1[fortran,threads] dev-libs/maloc !sys-apps/bar ! RESTRICT=mirror SLOT=0 SRC_URI=http://dasher.wustl.edu/tinker/downloads/tinker-8.2.1.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d java-pkg-opt-2 a71433e535af8faae0c0f6c861a32054 java-utils-2 e38ea02d8ed864a74078ecf46aa06f30 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4a33c9008e5ee30cb8840a3fdc24df2b preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4a1902f969e5718126434fc35f3a0d9c -_md5_=fb598b8d929f5e0c789410edc0a98c00 +_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 28f0f3c0226306ec5f49e13bf851f171 estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d java-pkg-opt-2 a71433e535af8faae0c0f6c861a32054 java-utils-2 cfb5f6911bb70204c94ceafd0372c716 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 4fbbbc98f236f1b43acd99476bc3cd85 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb vcs-clean d271b7bc7e6a009758d7d4ef749174e3 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4a1902f969e5718126434fc35f3a0d9c +_md5_=d76608229d3c47e52e112ff912da468a diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20150914-r1 b/metadata/md5-cache/sci-chemistry/tm-align-20150914-r1 index 2b439a835413..a69236c67976 100644 --- a/metadata/md5-cache/sci-chemistry/tm-align-20150914-r1 +++ b/metadata/md5-cache/sci-chemistry/tm-align-20150914-r1 @@ -1,4 +1,4 @@ -BDEPEND=dev-util/ninja >=dev-util/cmake-3.20.5 virtual/fortran +BDEPEND=>=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 virtual/fortran DEFINED_PHASES=compile configure install prepare setup test DEPEND=virtual/fortran DESCRIPTION=Quick & Accurate Structural Alignment @@ -11,5 +11,5 @@ LICENSE=tm-align RDEPEND=virtual/fortran SLOT=0 SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20150914.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=c0efb6c6f33b081376d1b36ca966aff2 diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha51 b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha51 deleted file mode 100644 index 56b174c8a35a..000000000000 --- a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha51 +++ /dev/null @@ -1,17 +0,0 @@ -BDEPEND=virtual/pkgconfig dev-lang/swig -DEFINED_PHASES=compile configure install nofetch postinst postrm preinst prepare setup -DEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_8? ( dev-python/numpy[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/numpy[python_targets_python3_9(-)] ) >=dev-lang/tk-8.6.1:0= dev-lang/perl dev-libs/expat sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1:0=[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) dev-util/desktop-file-utils x11-misc/shared-mime-info -DESCRIPTION=Visual Molecular Dynamics -EAPI=7 -HOMEPAGE=http://www.ks.uiuc.edu/Research/vmd/ -INHERIT=cuda desktop flag-o-matic prefix python-single-r1 toolchain-funcs xdg -IUSE=cuda gromacs msms povray sqlite tachyon xinerama python_single_target_python3_8 python_single_target_python3_9 -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=vmd -RDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_8? ( dev-python/numpy[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/numpy[python_targets_python3_9(-)] ) >=dev-lang/tk-8.6.1:0= dev-lang/perl dev-libs/expat sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1:0=[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) sci-biology/stride sci-chemistry/chemical-mime-data sci-chemistry/surf x11-misc/xdg-utils x11-terms/xterm msms? ( sci-chemistry/msms-bin ) povray? ( media-gfx/povray ) -REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 ) -RESTRICT=fetch -SLOT=0 -SRC_URI=vmd-1.9.4a51.src.tar.gz https://dev.gentoo.org/~pacho/vmd/vmd-1.9.4_alpha51-gentoo-patches.tar.xz -_eclasses_=cuda 15edbf8fd9df209322f42c06ecf59a96 desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 prefix eab3c99d77fe00506c109c8a736186f7 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=8b2cc7a2bd011a6f3854147562919701 diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha55 b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha55 index ab879bc04a84..dc4eb98cf1c5 100644 --- a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha55 +++ b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha55 @@ -13,5 +13,5 @@ REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 RESTRICT=fetch SLOT=0 SRC_URI=vmd-1.9.4a55.src.tar.gz fetch+https://dev.gentoo.org/~pacho/vmd/vmd-1.9.4_alpha51-gentoo-patches.tar.xz -_eclasses_=cuda 15edbf8fd9df209322f42c06ecf59a96 desktop c0d27bf73aa08ca05b663dbd31fbef28 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 prefix eab3c99d77fe00506c109c8a736186f7 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cuda 15edbf8fd9df209322f42c06ecf59a96 desktop 22952d8f27cac191d75529d4c38e6bfa flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 prefix eab3c99d77fe00506c109c8a736186f7 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=7115cb90c54b213ea4909d2b77d0f2a1 diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha57 b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha57 new file mode 100644 index 000000000000..eed69e92a23d --- /dev/null +++ b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha57 @@ -0,0 +1,17 @@ +BDEPEND=virtual/pkgconfig dev-lang/swig +DEFINED_PHASES=compile configure install nofetch postinst postrm preinst prepare setup +DEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_single_target_python3_8? ( dev-python/numpy[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/numpy[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/numpy[python_targets_python3_10(-)] ) >=dev-lang/tk-8.6.1:0= dev-lang/perl dev-libs/expat sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1:0=[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) +DESCRIPTION=Visual Molecular Dynamics +EAPI=8 +HOMEPAGE=http://www.ks.uiuc.edu/Research/vmd/ +INHERIT=cuda desktop flag-o-matic prefix python-single-r1 toolchain-funcs xdg +IUSE=cuda gromacs msms povray sqlite tachyon xinerama python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 +KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux +LICENSE=vmd +RDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_single_target_python3_8? ( dev-python/numpy[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/numpy[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/numpy[python_targets_python3_10(-)] ) >=dev-lang/tk-8.6.1:0= dev-lang/perl dev-libs/expat sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1:0=[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) sci-biology/stride sci-chemistry/chemical-mime-data sci-chemistry/surf x11-misc/xdg-utils x11-terms/xterm msms? ( sci-chemistry/msms-bin ) povray? ( media-gfx/povray ) +REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) +RESTRICT=fetch +SLOT=0 +SRC_URI=vmd-1.9.4a57.src.tar.gz fetch+https://dev.gentoo.org/~pacho/vmd/vmd-1.9.4_alpha57-gentoo-patches.tar.xz +_eclasses_=cuda 15edbf8fd9df209322f42c06ecf59a96 desktop 22952d8f27cac191d75529d4c38e6bfa flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 prefix eab3c99d77fe00506c109c8a736186f7 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb xdg 6024fbc93167fad782e2032933654857 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=2bbc8350e0b2d9da91e7e20f2c26fbf0 diff --git a/metadata/md5-cache/sci-chemistry/votca-2022 b/metadata/md5-cache/sci-chemistry/votca-2022 index 73f771d9b7f4..f22598b3d128 100644 --- a/metadata/md5-cache/sci-chemistry/votca-2022 +++ b/metadata/md5-cache/sci-chemistry/votca-2022 @@ -1,4 +1,4 @@ -BDEPEND=virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare setup test DEPEND=!sci-libs/votca-tools !sci-chemistry/votca-csg !sci-chemistry/votca-xtp python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) app-shells/bash:* >=dev-cpp/eigen-3.3 dev-libs/boost:= dev-libs/expat sci-libs/fftw:3.0= dev-lang/perl gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) sci-libs/hdf5[cxx] sci-libs/libxc sci-libs/libint:2 DESCRIPTION=Versatile Object-oriented Toolkit for Coarse-graining Applications @@ -6,12 +6,12 @@ EAPI=7 HOMEPAGE=https://www.votca.org/ INHERIT=bash-completion-r1 cmake python-single-r1 IUSE=+gromacs test python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 -KEYWORDS=~amd64 ~x86 ~amd64-linux +KEYWORDS=amd64 x86 ~amd64-linux LICENSE=Apache-2.0 RDEPEND=!sci-libs/votca-tools !sci-chemistry/votca-csg !sci-chemistry/votca-xtp python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) app-shells/bash:* >=dev-cpp/eigen-3.3 dev-libs/boost:= dev-libs/expat sci-libs/fftw:3.0= dev-lang/perl gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) sci-libs/hdf5[cxx] sci-libs/libxc sci-libs/libint:2 REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/votca/votca/archive/v2022.tar.gz -> votca-2022.tar.gz -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e -_md5_=fa681690dc7c4904899bd6807e2ca434 +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_md5_=715c58a911a5aa30ab5e914b627a036d diff --git a/metadata/md5-cache/sci-chemistry/votca-9999 b/metadata/md5-cache/sci-chemistry/votca-9999 index 057de4e7e045..cf1cbbf30643 100644 --- a/metadata/md5-cache/sci-chemistry/votca-9999 +++ b/metadata/md5-cache/sci-chemistry/votca-9999 @@ -1,4 +1,4 @@ -BDEPEND=virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 >=dev-vcs/git-1.8.2.1[curl] +BDEPEND=virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 >=dev-vcs/git-1.8.2.1[curl] DEFINED_PHASES=compile configure install postinst prepare setup test unpack DEPEND=!sci-libs/votca-tools !sci-chemistry/votca-csg !sci-chemistry/votca-xtp python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) app-shells/bash:* >=dev-cpp/eigen-3.3 dev-libs/boost:= dev-libs/expat sci-libs/fftw:3.0= dev-lang/perl gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) sci-libs/hdf5[cxx] sci-libs/libxc sci-libs/libint:2 DESCRIPTION=Versatile Object-oriented Toolkit for Coarse-graining Applications @@ -12,5 +12,5 @@ RDEPEND=!sci-libs/votca-tools !sci-chemistry/votca-csg !sci-chemistry/votca-xtp REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 5dc84801daa87406aafaf535cb947a64 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 648fe6a039e87233d7f48da72cadb76f strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=fa681690dc7c4904899bd6807e2ca434 diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-1.6.4 b/metadata/md5-cache/sci-chemistry/votca-csg-1.6.4 index 607f734ec556..e14cfc52cafc 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csg-1.6.4 +++ b/metadata/md5-cache/sci-chemistry/votca-csg-1.6.4 @@ -1,4 +1,4 @@ -BDEPEND=>=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=>=app-text/txt2tags-2.5 virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare test unpack DEPEND=app-shells/bash:* >=dev-cpp/eigen-3.3 dev-lang/perl ~sci-libs/votca-tools-1.6.4 gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) hdf5? ( sci-libs/hdf5 ) DESCRIPTION=Votca coarse-graining engine @@ -12,5 +12,5 @@ PDEPEND=extras? ( ~sci-chemistry/votca-csgapps-1.6.4 ) RDEPEND=app-shells/bash:* >=dev-cpp/eigen-3.3 dev-lang/perl ~sci-libs/votca-tools-1.6.4 gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) hdf5? ( sci-libs/hdf5 ) SLOT=0 SRC_URI=https://github.com/votca/csg/archive/v1.6.4.tar.gz -> votca-csg-1.6.4.tar.gz doc? ( https://github.com/votca/csg-manual/releases/download/v1.6.4/votca-csg-manual-1.6.4.pdf ) examples? ( https://github.com/votca/csg-tutorials/archive/v1.6.4.tar.gz -> votca-csg-tutorials-1.6.4.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=2f329cc3dd7168728e805eec9f7a32bf diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-2021.2 b/metadata/md5-cache/sci-chemistry/votca-csg-2021.2 index 31676ae2cac8..264286c78a0e 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csg-2021.2 +++ b/metadata/md5-cache/sci-chemistry/votca-csg-2021.2 @@ -1,4 +1,4 @@ -BDEPEND=>=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=>=app-text/txt2tags-2.5 virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare test unpack DEPEND=app-shells/bash:* >=dev-cpp/eigen-3.3 dev-lang/perl ~sci-libs/votca-tools-2021.2 gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) hdf5? ( sci-libs/hdf5 ) DESCRIPTION=Votca coarse-graining engine @@ -12,5 +12,5 @@ RDEPEND=app-shells/bash:* >=dev-cpp/eigen-3.3 dev-lang/perl ~sci-libs/votca-tool RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/votca/csg/archive/v2021.2.tar.gz -> votca-csg-2021.2.tar.gz examples? ( https://github.com/votca/csg-tutorials/archive/v2021.2.tar.gz -> votca-csg-tutorials-2021.2.tar.gz ) -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=aa61163ebdebfc006a4183a3cbae6c68 diff --git a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.6.4 b/metadata/md5-cache/sci-chemistry/votca-csgapps-1.6.4 index 3a6901145e5a..3c59ff121444 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.6.4 +++ b/metadata/md5-cache/sci-chemistry/votca-csgapps-1.6.4 @@ -1,4 +1,4 @@ -BDEPEND=dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=>=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install prepare test DEPEND=>=dev-cpp/eigen-3.3 ~sci-chemistry/votca-csg-1.6.4 DESCRIPTION=Extra applications for votca-csg @@ -10,5 +10,5 @@ LICENSE=Apache-2.0 RDEPEND=>=dev-cpp/eigen-3.3 ~sci-chemistry/votca-csg-1.6.4 SLOT=0 SRC_URI=https://github.com/votca/csgapps/archive/v1.6.4.tar.gz -> votca-csgapps-1.6.4.tar.gz -_eclasses_=cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=cmake 44afbf15c35884f7c840470f1cf05d0d edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=05cbd3b8f122302c77953bfa3452c293 diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-1.6.4 b/metadata/md5-cache/sci-chemistry/votca-xtp-1.6.4 index 796df60cdf6f..60e13bbf3b42 100644 --- a/metadata/md5-cache/sci-chemistry/votca-xtp-1.6.4 +++ b/metadata/md5-cache/sci-chemistry/votca-xtp-1.6.4 @@ -1,4 +1,4 @@ -BDEPEND=virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare test DEPEND=>=dev-cpp/eigen-3.3 ~sci-chemistry/votca-csg-1.6.4 sci-libs/hdf5[cxx] sci-libs/libxc ~sci-libs/votca-tools-1.6.4 DESCRIPTION=Votca excitation and charge properties module @@ -10,5 +10,5 @@ LICENSE=Apache-2.0 RDEPEND=>=dev-cpp/eigen-3.3 ~sci-chemistry/votca-csg-1.6.4 sci-libs/hdf5[cxx] sci-libs/libxc ~sci-libs/votca-tools-1.6.4 SLOT=0 SRC_URI=https://github.com/votca/xtp/archive/v1.6.4.tar.gz -> votca-xtp-1.6.4.tar.gz -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=2748df7df0e3b59bd0a842fe11ca3f68 diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-2021.2 b/metadata/md5-cache/sci-chemistry/votca-xtp-2021.2 index e32f2617bdb3..d2418bb0486f 100644 --- a/metadata/md5-cache/sci-chemistry/votca-xtp-2021.2 +++ b/metadata/md5-cache/sci-chemistry/votca-xtp-2021.2 @@ -1,4 +1,4 @@ -BDEPEND=virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5 +BDEPEND=virtual/pkgconfig >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5 DEFINED_PHASES=compile configure install postinst prepare test DEPEND=>=dev-cpp/eigen-3.3 ~sci-chemistry/votca-csg-2021.2 sci-libs/hdf5[cxx] sci-libs/libxc sci-libs/libint:2 ~sci-libs/votca-tools-2021.2 DESCRIPTION=Votca excitation and charge properties module @@ -12,5 +12,5 @@ RDEPEND=>=dev-cpp/eigen-3.3 ~sci-chemistry/votca-csg-2021.2 sci-libs/hdf5[cxx] s RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/votca/xtp/archive/v2021.2.tar.gz -> votca-xtp-2021.2.tar.gz -_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 90e2b29417d53718328f3a95227137a0 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib 4a33c9008e5ee30cb8840a3fdc24df2b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e +_eclasses_=bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff cmake 44afbf15c35884f7c840470f1cf05d0d edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multilib 4fbbbc98f236f1b43acd99476bc3cd85 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=8263546cfc693f6fe224a55c0a16dafd diff --git a/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1 b/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1 index a4090f781369..7aba33af3ba5 100644 --- a/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1 +++ b/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1 @@ -4,10 +4,11 @@ DEPEND=media-libs/glew:0= media-libs/mesa[X(+)] x11-libs/wxGTK:3.0[X,opengl] DESCRIPTION=Chemical 3D graphics program with GAMESS input builder EAPI=7 HOMEPAGE=http://www.scl.ameslab.gov/MacMolPlt/ +INHERIT=autotools desktop toolchain-funcs wxwidgets KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 RDEPEND=media-libs/glew:0= media-libs/mesa[X(+)] x11-libs/wxGTK:3.0[X,opengl] SLOT=0 SRC_URI=https://wxmacmolplt.googlecode.com/files/wxmacmolplt-7.5.tar.gz -_eclasses_=autotools b46e8992a8126c894fbdc8084fc040c4 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4a33c9008e5ee30cb8840a3fdc24df2b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4a1902f969e5718126434fc35f3a0d9c wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 +_eclasses_=autotools 136117fb43a9bf5598530e9cc642f710 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e multilib 4fbbbc98f236f1b43acd99476bc3cd85 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb wrapper 4a1902f969e5718126434fc35f3a0d9c wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 _md5_=79066879c49f635ae7f6925ca500e74a diff --git a/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001 b/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001 index 49cde405ed23..04a4cad99d5c 100644 --- a/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001 +++ b/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001 @@ -2,9 +2,10 @@ DEFINED_PHASES=install prepare DESCRIPTION=Cross conversion environment of NMR spectra EAPI=6 HOMEPAGE=http://fermi.pharm.hokudai.ac.jp/olivia/api/index.php/Xyza2pipe_src +INHERIT=toolchain-funcs KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=olivia SLOT=0 SRC_URI=http://fermi.pharm.hokudai.ac.jp/olivia/documents/xyza2pipe.tgz -> xyza2pipe-20121001.tgz -_eclasses_=multilib 4a33c9008e5ee30cb8840a3fdc24df2b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb _md5_=d056cc95701850434eb72d01e71d2ea5 |