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authorV3n3RiX <venerix@redcorelinux.org>2020-06-21 17:50:24 +0100
committerV3n3RiX <venerix@redcorelinux.org>2020-06-21 17:50:24 +0100
commitfeb0daf81d888e9160f9f94502de09b66f2a63fd (patch)
treeb6e5c40ce2abef3da27ed50a023153f475e0ddef /metadata/md5-cache/sci-biology
parent9452a6e87b6c2c70513bc47a2470bf9f1168920e (diff)
gentoo resync : 21.06.2020
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/ApE-2.0.7-r12
-rw-r--r--metadata/md5-cache/sci-biology/GBrowse-2.48-r12
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-0.9.12
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin28857 -> 28550 bytes
-rw-r--r--metadata/md5-cache/sci-biology/STAR-2.5.3a2
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.2-r113
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.313
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.3-r12
-rw-r--r--metadata/md5-cache/sci-biology/amap-2.2-r32
-rw-r--r--metadata/md5-cache/sci-biology/amos-3.1.0-r42
-rw-r--r--metadata/md5-cache/sci-biology/augustus-2.5.52
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-2.5.12
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-99992
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.52
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.9-r22
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.26.02
-rw-r--r--metadata/md5-cache/sci-biology/bfast-0.7.0a2
-rw-r--r--metadata/md5-cache/sci-biology/biogrep-1.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.732
-rw-r--r--metadata/md5-cache/sci-biology/blat-34-r22
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-1.1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-2.2.92
-rw-r--r--metadata/md5-cache/sci-biology/bwa-0.7.16a2
-rw-r--r--metadata/md5-cache/sci-biology/cd-hit-4.6.62
-rw-r--r--metadata/md5-cache/sci-biology/clustal-omega-1.2.42
-rw-r--r--metadata/md5-cache/sci-biology/clustalw-1.83-r42
-rw-r--r--metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r22
-rw-r--r--metadata/md5-cache/sci-biology/clustalx-2.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/consed-292
-rw-r--r--metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r22
-rw-r--r--metadata/md5-cache/sci-biology/dialign2-2.2.12
-rw-r--r--metadata/md5-cache/sci-biology/diya-1.0_rc42
-rw-r--r--metadata/md5-cache/sci-biology/elph-1.0.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domalign-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domsearch-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-emnu-1.05.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-meme-4.7.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-mse-3.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-signature-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-structure-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-topo-2.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.6602
-rw-r--r--metadata/md5-cache/sci-biology/emboss-6.6.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/eugene-4.1d2
-rw-r--r--metadata/md5-cache/sci-biology/exonerate-2.2.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/express-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/fasta-36.3.5e2
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.82
-rw-r--r--metadata/md5-cache/sci-biology/fastx_toolkit-0.0.142
-rw-r--r--metadata/md5-cache/sci-biology/finchtv-1.3.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/foldingathome-7.5.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/foldingathome-7.6.132
-rw-r--r--metadata/md5-cache/sci-biology/gatk-2.42
-rw-r--r--metadata/md5-cache/sci-biology/gibbs-3.12
-rw-r--r--metadata/md5-cache/sci-biology/glimmer-3.02-r32
-rw-r--r--metadata/md5-cache/sci-biology/glimmer-3.02b2
-rw-r--r--metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/iedera-1.05-r12
-rw-r--r--metadata/md5-cache/sci-biology/kalign-2.03-r22
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-0.43.12
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-99992
-rw-r--r--metadata/md5-cache/sci-biology/lagan-2.0-r32
-rw-r--r--metadata/md5-cache/sci-biology/last-299-r12
-rw-r--r--metadata/md5-cache/sci-biology/libgtextutils-0.6.12
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.3052
-rw-r--r--metadata/md5-cache/sci-biology/maq-0.7.1-r22
-rw-r--r--metadata/md5-cache/sci-biology/maqview-0.2.5-r32
-rw-r--r--metadata/md5-cache/sci-biology/mcl-14.1372
-rw-r--r--metadata/md5-cache/sci-biology/meme-4.11.2_p22
-rw-r--r--metadata/md5-cache/sci-biology/mira-4.0.22
-rw-r--r--metadata/md5-cache/sci-biology/mosaik-2.2.302
-rw-r--r--metadata/md5-cache/sci-biology/mothur-1.27.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/mrbayes-3.1.2-r22
-rw-r--r--metadata/md5-cache/sci-biology/mummer-3.232
-rw-r--r--metadata/md5-cache/sci-biology/muscle-3.8.312
-rw-r--r--metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r22
-rw-r--r--metadata/md5-cache/sci-biology/njplot-2.3-r22
-rw-r--r--metadata/md5-cache/sci-biology/pals-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/paml-4.4c-r12
-rw-r--r--metadata/md5-cache/sci-biology/phrap-1.080812-r22
-rw-r--r--metadata/md5-cache/sci-biology/phred-071220-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.69-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.696-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.696-r22
-rw-r--r--metadata/md5-cache/sci-biology/phyml-2.4.5-r32
-rw-r--r--metadata/md5-cache/sci-biology/picard-1.1032
-rw-r--r--metadata/md5-cache/sci-biology/piler-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/pilercr-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/plink-1.90_pre1405142
-rw-r--r--metadata/md5-cache/sci-biology/poa-2-r12
-rw-r--r--metadata/md5-cache/sci-biology/prank-1406032
-rw-r--r--metadata/md5-cache/sci-biology/primer3-2.3.72
-rw-r--r--metadata/md5-cache/sci-biology/probcons-1.12-r12
-rw-r--r--metadata/md5-cache/sci-biology/prodigal-2.6.32
-rw-r--r--metadata/md5-cache/sci-biology/profphd-1.0.392
-rw-r--r--metadata/md5-cache/sci-biology/profphd-1.0.402
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.42
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.52
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.12.0.12
-rw-r--r--metadata/md5-cache/sci-biology/qrna-2.0.3c-r32
-rw-r--r--metadata/md5-cache/sci-biology/raxml-7.2.62
-rw-r--r--metadata/md5-cache/sci-biology/recon-1.082
-rw-r--r--metadata/md5-cache/sci-biology/rmblast-1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/rnaview-20040713-r42
-rw-r--r--metadata/md5-cache/sci-biology/samtools-0.1.20-r32
-rw-r--r--metadata/md5-cache/sci-biology/samtools-1.52
-rw-r--r--metadata/md5-cache/sci-biology/samtools-1.9-r12
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.3.52
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.5.42
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.62
-rw-r--r--metadata/md5-cache/sci-biology/seqan-1.4.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.2.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.4.02
-rw-r--r--metadata/md5-cache/sci-biology/seqan-99992
-rw-r--r--metadata/md5-cache/sci-biology/shrimp-2.2.32
-rw-r--r--metadata/md5-cache/sci-biology/sibsim4-0.202
-rw-r--r--metadata/md5-cache/sci-biology/sim4-20030921-r22
-rw-r--r--metadata/md5-cache/sci-biology/stride-20011129-r12
-rw-r--r--metadata/md5-cache/sci-biology/t-coffee-11.00-r22
-rw-r--r--metadata/md5-cache/sci-biology/tree-puzzle-5.22
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/trnascan-se-1.312
-rw-r--r--metadata/md5-cache/sci-biology/uchime-4.2.402
-rw-r--r--metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r12
-rw-r--r--metadata/md5-cache/sci-biology/unafold-3.8-r12
-rw-r--r--metadata/md5-cache/sci-biology/vcftools-0.1.142
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.2.102
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.12
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.82
-rw-r--r--metadata/md5-cache/sci-biology/wgs-assembler-7.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/wise-2.4.0_alpha2
-rw-r--r--metadata/md5-cache/sci-biology/yass-1.14-r22
145 files changed, 142 insertions, 168 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
index 1f0333f64339..0e46aa5adfd6 100644
--- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
+++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
@@ -9,5 +9,5 @@ RDEPEND=dev-lang/tcl:0 dev-lang/tk:0
RESTRICT=bindist mirror
SLOT=0
SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=ca6aef807b65b2b092f7e1ff4ebbe5e2
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
index 73c98cdf2e60..3d43ab08a4eb 100644
--- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
+++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15
SLOT=0
SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
_md5_=bccaeef3292f6df307fc14fb5a2a74b2
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
index 513c6744f35f..e44c38772ee0 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-0.9.1
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
@@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_pyth
REQUIRED_USE=|| ( python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/H/HTSeq/HTSeq-0.9.1.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 89b310c534a033a3566e0f26419daa81 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 44725b3eb803b8abcd6978759c231210 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=1a7e20f6705425c8dc29ce2c240db0b2
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index 1e70158fe9a9..30956b4e791b 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -9,5 +9,5 @@ PROPERTIES=live
RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
REQUIRED_USE=|| ( python_targets_python3_6 )
SLOT=0
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 89b310c534a033a3566e0f26419daa81 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 44725b3eb803b8abcd6978759c231210 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=1a7e20f6705425c8dc29ce2c240db0b2
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 893f4df102eb..9d2dbe5aee08 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/STAR-2.5.3a b/metadata/md5-cache/sci-biology/STAR-2.5.3a
index 0b979dd33757..3f77a14e614e 100644
--- a/metadata/md5-cache/sci-biology/STAR-2.5.3a
+++ b/metadata/md5-cache/sci-biology/STAR-2.5.3a
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sci-libs/htslib:=
SLOT=0
SRC_URI=https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz -> STAR-2.5.3a.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=1eb821b9192887ab1f2ac6b1536037ac
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
deleted file mode 100644
index 3ad8ac2ff1cf..000000000000
--- a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=configure prepare pretend setup
-DEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi ) misc-haskell? ( dev-lang/ghc dev-haskell/mmap ) >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
-EAPI=6
-HOMEPAGE=http://www.bcgsc.ca/platform/bioinfo/software/abyss/
-IUSE=+mpi openmp misc-haskell
-KEYWORDS=~amd64 ~x86
-LICENSE=abyss
-RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
-SLOT=0
-SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.2.tar.gz -> abyss-2.0.2.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
-_md5_=3b173739bd4e2f9d61a49918b3b8bc05
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3 b/metadata/md5-cache/sci-biology/abyss-2.0.3
deleted file mode 100644
index 2dd1fbc30692..000000000000
--- a/metadata/md5-cache/sci-biology/abyss-2.0.3
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=configure prepare pretend setup
-DEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi ) misc-haskell? ( dev-lang/ghc ) >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
-EAPI=6
-HOMEPAGE=http://www.bcgsc.ca/platform/bioinfo/software/abyss/
-IUSE=+mpi openmp misc-haskell
-KEYWORDS=~amd64 ~x86
-LICENSE=abyss
-RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
-SLOT=0
-SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
-_md5_=4c70cbdf60d5dc2d564272b103f2b469
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.3-r1
index af941d470d96..84630ef72cf4 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.0.3-r1
+++ b/metadata/md5-cache/sci-biology/abyss-2.0.3-r1
@@ -9,5 +9,5 @@ LICENSE=abyss
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=390c105831f179d395708c7ba4778ecc
diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3
index 83ae29b7f0cd..cc7f8c33e3a5 100644
--- a/metadata/md5-cache/sci-biology/amap-2.2-r3
+++ b/metadata/md5-cache/sci-biology/amap-2.2-r3
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 )
SLOT=0
SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 16d46032afaca1d6d0621f82084880cb ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 16d46032afaca1d6d0621f82084880cb ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=6bd792e8b76c06ee993b88f83e48b907
diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4
index df517db9e28c..2f7d3929d9a6 100644
--- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4
+++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4
@@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-l
REQUIRED_USE=^^ ( python_single_target_python2_7 )
SLOT=0
SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=aec6d1c76d5ea621c66e803800e2b3c4
diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5
index 21fb3dbb6906..759848fe66c7 100644
--- a/metadata/md5-cache/sci-biology/augustus-2.5.5
+++ b/metadata/md5-cache/sci-biology/augustus-2.5.5
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86
LICENSE=Artistic
SLOT=0
SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=80962b244c7531e320f35904727b5bd5
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.1 b/metadata/md5-cache/sci-biology/bamtools-2.5.1
index 3026795895fa..e372859ec927 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.1
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.1
@@ -9,5 +9,5 @@ LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/2.5.1
SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.1.tar.gz -> bamtools-2.5.1.tar.gz
-_eclasses_=cmake 19b0421555865baefd505831dd4303e3 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake 19b0421555865baefd505831dd4303e3 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=a2299dc6ca850c1c25582656d7586681
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index 6f9a8024b4a4..898e0a561883 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -8,5 +8,5 @@ LICENSE=MIT
PROPERTIES=live
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/9999
-_eclasses_=cmake 19b0421555865baefd505831dd4303e3 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake 19b0421555865baefd505831dd4303e3 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=a2299dc6ca850c1c25582656d7586681
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.5 b/metadata/md5-cache/sci-biology/bcftools-1.5
index b6c6f3a53721..837a7117c3e0 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.5
+++ b/metadata/md5-cache/sci-biology/bcftools-1.5
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_pytho
REQUIRED_USE=|| ( python_targets_python2_7 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2
-_eclasses_=multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=e289371e3fec376baf8fe36c652ca521
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.9-r2 b/metadata/md5-cache/sci-biology/bcftools-1.9-r2
index 85bd182adaa3..6bd99971c42d 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.9-r2
+++ b/metadata/md5-cache/sci-biology/bcftools-1.9-r2
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[py
REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=3bd4e9294012ee3e5fdd9e07796a4cc2
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0
index 96748c6b53ba..f0b6f9afd4fd 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.26.0
+++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0
@@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz https://dev.gentoo.org/~mgorny/dist/bedtools-2.26.0-fix-buildsystem.patch.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1b65bed58bf80baf59cb7772dbdb6023
diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a
index 9183f293ddee..14ccf9866474 100644
--- a/metadata/md5-cache/sci-biology/bfast-0.7.0a
+++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a
@@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f752137cf374be5cbb2754f3aa98ad0d
diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2
index decb7386cb2e..999a4a61d65d 100644
--- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2
+++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf )
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=9731727dae2a2514bcaa486b0059272e
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1
index fb2627fbcf11..9a7d8fc9bd97 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.1
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_6 )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 89b310c534a033a3566e0f26419daa81 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 44725b3eb803b8abcd6978759c231210 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=9aa50282a8f020366a788665165393c5
diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9
index a119f387108a..038c70624aaf 100644
--- a/metadata/md5-cache/sci-biology/bioperl-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9
@@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr
REQUIRED_USE=minimal? ( !graphviz )
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=be22a76392a6e5c121e4b6d388045faa
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
index 6d6aabef4399..31f7f1274ab5 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=2470d7ecf1b6ff1902a8d74057748480
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
index 2099db271b15..e1a147aa5b14 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8f7c4053ffbec76cfad29cca2d99847b
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
index 7afc40fb33c6..eb9cb3ad4627 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=9caec4e5b47cbf306a1689903f2a018a
diff --git a/metadata/md5-cache/sci-biology/biopython-1.73 b/metadata/md5-cache/sci-biology/biopython-1.73
index f980647e7472..ce2dd890e094 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.73
+++ b/metadata/md5-cache/sci-biology/biopython-1.73
@@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.73.tar.gz
-_eclasses_=distutils-r1 89b310c534a033a3566e0f26419daa81 eutils fcb2aa98e1948b835b5ae66ca52868c5 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=distutils-r1 44725b3eb803b8abcd6978759c231210 eutils fcb2aa98e1948b835b5ae66ca52868c5 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=a7d43dcf81616b69a0167851abcbe227
diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2
index 4dfea577d14f..4be13bea1912 100644
--- a/metadata/md5-cache/sci-biology/blat-34-r2
+++ b/metadata/md5-cache/sci-biology/blat-34-r2
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=blat
SLOT=0
SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=d48361335699038107318f5ca57533e8
diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
index 956c4e5c95e6..7fa0d2427830 100644
--- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
+++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
@@ -9,5 +9,5 @@ LICENSE=Artistic
RDEPEND=tbb? ( dev-cpp/tbb )
SLOT=1
SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=069dc133bc01cabadeda1e327034b7a7
diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9
index 45d7ff48a218..9c4daecb8ce4 100644
--- a/metadata/md5-cache/sci-biology/bowtie-2.2.9
+++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb )
SLOT=2
SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=46d87c867cd445707dc1913cf3dd7eb6
diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.16a b/metadata/md5-cache/sci-biology/bwa-0.7.16a
index cbca5d358564..1e02583c0716 100644
--- a/metadata/md5-cache/sci-biology/bwa-0.7.16a
+++ b/metadata/md5-cache/sci-biology/bwa-0.7.16a
@@ -7,5 +7,5 @@ LICENSE=GPL-3
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.16a.tar.bz2
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=6b21049857f301168f361c45510f8256
diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
index f3b6dd03d33b..c5094e3f1f47 100644
--- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6
+++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bbe0ae10275a73485487e08f19f4ac1b
diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
index 0a796da41924..82f2a56de37d 100644
--- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
+++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-libs/argtable
SLOT=0
SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=9ade45d2e283bc5fcc7eef16725e18ae
diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4
index bc0c30804cc1..4926c7fd81e2 100644
--- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4
+++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4
@@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-sol
LICENSE=clustalw
SLOT=1
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=0f69889feff7a8cb3002ae5d4ea053d3
diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
index 7278a72430f3..e9f232ee1d88 100644
--- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
+++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=virtual/mpi
SLOT=0
SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=9e376a1d2ae782d9495b0c6c318aa097
diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3
index 7c8afcf2f0eb..9162311c11d7 100644
--- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3
+++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3
RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1
SLOT=0
SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 estack 686eaab303305a908fd57b2fd7617800 multilib 0914eab919f4f11dd9e0407b92af4726 qmake-utils 4eb5e05ef7ee630c003e3f0edc094135 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 estack 686eaab303305a908fd57b2fd7617800 multilib 2477ebe553d3e4d2c606191fe6c33602 qmake-utils 4eb5e05ef7ee630c003e3f0edc094135 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=3f60f1952758458fc3cd4e2789a942f5
diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29
index b912fa1b6222..d7eeb55c2a6b 100644
--- a/metadata/md5-cache/sci-biology/consed-29
+++ b/metadata/md5-cache/sci-biology/consed-29
@@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan
RESTRICT=fetch
SLOT=0
SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1e30f1827727dab34c75c8c026745369
diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
index 760ea2ef17db..47202f77bab8 100644
--- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
+++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=b04d9beffea802bb82f896df101ca660
diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1
index 849f33a26bb6..f32ca7e8b801 100644
--- a/metadata/md5-cache/sci-biology/dialign2-2.2.1
+++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=3761a69a47f38308f54ae0b051361ed6
diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4
index 5cdd213e205f..aaa802f2c804 100644
--- a/metadata/md5-cache/sci-biology/diya-1.0_rc4
+++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal? ( sci-biology/mummer sci-biology/glimmer sci-biology/trnascan-se sci-biology/infernal ) dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5d4639d7c08c43e2c2208492508fd56c
diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1
index e9bb633bb490..f46875b1541a 100644
--- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1
+++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos
LICENSE=Artistic
SLOT=0
SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=dbee2f511488caf9eadadb20d043a2da
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
index 636c41186b1c..0bc952c781c6 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4166ba28131fdf70907b31300aa4c08b
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
index 79dfe87b7f3e..3803eac24ef6 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=ef491b452e56be12961f62b16961f4f1
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
index d8025411f725..f4c63784286b 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
index bc8de9b95417..f31ae6a59763 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=9f8b2caa273f4ae3b0463e6de6782660
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
index 9b94f19141e8..ff11306b2397 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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_md5_=920906439fbc5278460201b23a615736
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
index cc916562bd8d..cc5ff46c9477 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
index 7738a2e27dee..6a9c3d9e168a 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
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_md5_=1b156bed7ea031aeb5464836dd987f18
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
index 853c048e64fc..8d38a1c6018f 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
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+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=83d02ae22d4e1864669639d9289cd112
diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
index 33d1d374bb48..effb2f793990 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
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diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
index 1851c74104ee..1941c2df6bf3 100644
--- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
+++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz
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diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
index b5cb5ec8ed61..066686440215 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
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+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=84df94b7c4b0f044de45cef524cbf453
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
index 2e8acd9c4029..f56592121f6a 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=052915aa60b919df12c7c4274d5be551
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
index 8078d72b7283..6774ab1bf7bb 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4cb685046b5a39b624eb3467b815c2c4
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
index c9b664a881b4..29046703436c 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=634d624be78f958ed7fca02e7dc43bd4
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
index 210108a49680..ae2afe83093a 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=e50220ee11093554b589c1f9f53e7c09
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
index 95d6f833c12b..f133d7ca261f 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=d257de40bcdb33c0735daac8a5f15fda
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
index 0f1a7598e60a..9b5e1ffd606d 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
@@ -10,5 +10,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci
RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 22ae82e140bdd95d17a34fd5fd733190 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 22ae82e140bdd95d17a34fd5fd733190 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=99a47266a2a8f2fd0a874111491146e2
diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d
index 8007eaed5be9..48a2de48125a 100644
--- a/metadata/md5-cache/sci-biology/eugene-4.1d
+++ b/metadata/md5-cache/sci-biology/eugene-4.1d
@@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0=
RESTRICT=test
SLOT=0
SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=683d1e7f9daeda6cd20b92117330ea81
diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
index fa17aed755f3..2d6d5e77a1d0 100644
--- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
+++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
@@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=05c99b447503c7a3fae4594cd126939a
diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1
index 394d13c1c532..bc3f63216291 100644
--- a/metadata/md5-cache/sci-biology/express-1.5.1
+++ b/metadata/md5-cache/sci-biology/express-1.5.1
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib
SLOT=0
SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=10c478f1e1a9a533322963cf4c2e92f8
diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e
index be7b0ab4c7a0..95df2063ac6e 100644
--- a/metadata/md5-cache/sci-biology/fasta-36.3.5e
+++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e
@@ -9,5 +9,5 @@ LICENSE=fasta
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=81d08e889f0cf03161c6bf834effe531
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8
index c86c76751a38..105c885fe68e 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.8
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8
@@ -9,5 +9,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=5a3e768febbbadcd5c8a4141dd49e11c
diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
index e4eb72b95a1d..fca6845fa804 100644
--- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
+++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
@@ -8,5 +8,5 @@ LICENSE=AGPL-3
RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot
SLOT=0
SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=c3bb0edd6b01a31019cf5fd59e22122a
diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
index 2cb57ca81e49..b879c772abc2 100644
--- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
+++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=finchtv
SLOT=0
SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=08355830f28d1052c2ab527b82a8dd68
diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3 b/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3
index 8f45a06c13fe..313f4c1f646d 100644
--- a/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3
+++ b/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3
@@ -9,5 +9,5 @@ RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0*
RESTRICT=mirror bindist strip
SLOT=0
SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.5/fahclient_7.5.1-64bit-release.tar.bz2
-_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 0914eab919f4f11dd9e0407b92af4726 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 2477ebe553d3e4d2c606191fe6c33602 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 versionator 2352c3fc97241f6a02042773c8287748
_md5_=8ca37225f92ffd3cc94ad6b4a4f43b0c
diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13
index 3e3c1ffe94df..f14fe01bfacd 100644
--- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13
+++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0*
RESTRICT=mirror bindist strip
SLOT=0
SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02
_md5_=35efc85acab21d56c5bb97f30da7e0f8
diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4
index a415a203a8ae..0572375b5b2e 100644
--- a/metadata/md5-cache/sci-biology/gatk-2.4
+++ b/metadata/md5-cache/sci-biology/gatk-2.4
@@ -9,5 +9,5 @@ LICENSE=MIT
RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3
SLOT=0
SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 16d46032afaca1d6d0621f82084880cb ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 16d46032afaca1d6d0621f82084880cb ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd versionator 2352c3fc97241f6a02042773c8287748
_md5_=8afea474ed6c1f4ad5ac6d6a18c49542
diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1
index 76d3fd8eb7a2..3d707c085c9a 100644
--- a/metadata/md5-cache/sci-biology/gibbs-3.1
+++ b/metadata/md5-cache/sci-biology/gibbs-3.1
@@ -10,5 +10,5 @@ LICENSE=GPL-2
RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 )
SLOT=0
SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=8d48efee68d1063803fccbc4c73a0f5d
diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3
index b7fa04b28c3a..6233f649eae6 100644
--- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3
+++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3
@@ -7,5 +7,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh
SLOT=0
SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=94600a4de5a2dc02bc6652d958a2a034
diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b
index 4b13dd572241..3d8f87279090 100644
--- a/metadata/md5-cache/sci-biology/glimmer-3.02b
+++ b/metadata/md5-cache/sci-biology/glimmer-3.02b
@@ -7,5 +7,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh sci-biology/elph
SLOT=0
SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=6916d92c69198563f19b744f1e57dddc
diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
index 46740498b8ed..3502e3c45c56 100644
--- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
+++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=Artistic
SLOT=0
SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=9fc33629a982f35b93c18da772894fdd
diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1
index fa39b5a00a93..80c28bd7251f 100644
--- a/metadata/md5-cache/sci-biology/iedera-1.05-r1
+++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=ce77e1e27bd52fed2fd2af52744d6288
diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2
index 1a7e5e4835a7..46cc8df4e421 100644
--- a/metadata/md5-cache/sci-biology/kalign-2.03-r2
+++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=175d26382226c7bed2b44be485b01d01
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1
index d2fd815b37fc..e195b3f5e7f1 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.43.1
+++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1
@@ -8,5 +8,5 @@ LICENSE=BSD
RDEPEND=sci-libs/hdf5:= sys-libs/zlib:=
SLOT=0
SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=b5fc562bf49e70db44b86bc5702ae9f2
diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999
index d7eb6e207271..c702fcd42421 100644
--- a/metadata/md5-cache/sci-biology/kallisto-9999
+++ b/metadata/md5-cache/sci-biology/kallisto-9999
@@ -7,5 +7,5 @@ LICENSE=BSD
PROPERTIES=live
RDEPEND=sci-libs/hdf5:= sys-libs/zlib:=
SLOT=0
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=b5fc562bf49e70db44b86bc5702ae9f2
diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3
index affef0b016d5..29fb78ab9416 100644
--- a/metadata/md5-cache/sci-biology/lagan-2.0-r3
+++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3
@@ -7,5 +7,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=c9dbddd6a22f2e20ff25d0aa1e6f4280
diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1
index 4b1882b28061..4d27ee2eca67 100644
--- a/metadata/md5-cache/sci-biology/last-299-r1
+++ b/metadata/md5-cache/sci-biology/last-299-r1
@@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-l
REQUIRED_USE=^^ ( python_single_target_python2_7 )
SLOT=0
SRC_URI=http://last.cbrc.jp/last-299.zip
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=ec5206661373a6ef6ad77450dfbdb915
diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
index 4610426e650f..eee3f897681e 100644
--- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
+++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=AGPL-3
SLOT=0/0
SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=867c9b9e4eee26ad2a76ff6ff0594f52
diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305
index 2908fc936029..f26e9d7bdeb8 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.305
+++ b/metadata/md5-cache/sci-biology/mafft-7.305
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=75ed445f47bb6f3b4dd4a52cb903183f
diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2
index 4da5a6611958..9889fb0f0691 100644
--- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2
+++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=39ffb0025210075a8d7d7f6f81f8da56
diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
index 409a4c5efcf9..b4c641c38573 100644
--- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
+++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq
SLOT=0
SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=dee50558d10e75ff9e96f4c3f177c55f
diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137
index 7211979959e0..706dd8b00d62 100644
--- a/metadata/md5-cache/sci-biology/mcl-14.137
+++ b/metadata/md5-cache/sci-biology/mcl-14.137
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=3429c68609b6c70e047d577379f68f97
diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2
index 71cccb07df73..d829142e17ea 100644
--- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2
+++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2
@@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-l
REQUIRED_USE=^^ ( python_single_target_python2_7 )
SLOT=0
SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 estack 686eaab303305a908fd57b2fd7617800 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 estack 686eaab303305a908fd57b2fd7617800 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb versionator 2352c3fc97241f6a02042773c8287748
_md5_=a4080439675628436c06de8db9f59c6e
diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2
index 37f5eba2b8f0..1e178e16a858 100644
--- a/metadata/md5-cache/sci-biology/mira-4.0.2
+++ b/metadata/md5-cache/sci-biology/mira-4.0.2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-libs/boost[threads] dev-util/google-perftools
SLOT=0
SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=e7b4c654f7c0055be7ef6347b5bdfb8a
diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30
index 8ebe16621f6d..9e4629cf6bc2 100644
--- a/metadata/md5-cache/sci-biology/mosaik-2.2.30
+++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd
_md5_=630686b35f8a549c580c5fd0e2cb02fc
diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
index 78e4cf1ae2e9..9548f57e7e0a 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
+++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran
SLOT=0
SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 fortran-2 1a8c9d0b2d30f756bae6be4e9b39e46b ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 fortran-2 1a8c9d0b2d30f756bae6be4e9b39e46b ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=17f8b3c73710bbb746fc4cbfcf78b85d
diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
index 23862781666b..fdf97f50ec14 100644
--- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
+++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0= )
SLOT=0
SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=a944448f568e57bb9f221cd1f437ab09
diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23
index 687ae9310b38..01ad30904316 100644
--- a/metadata/md5-cache/sci-biology/mummer-3.23
+++ b/metadata/md5-cache/sci-biology/mummer-3.23
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=c256f298b416306c1be7005e7877f7b9
diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31
index 3a18b665cf7c..89a50e5440c2 100644
--- a/metadata/md5-cache/sci-biology/muscle-3.8.31
+++ b/metadata/md5-cache/sci-biology/muscle-3.8.31
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=!sci-libs/libmuscle
SLOT=0
SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=500ff424aff8c56744362bc87a3ff285
diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
index fa45e3110edd..f98192bd424d 100644
--- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
+++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt )
SLOT=0
SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8bcc533f96e3c3fe8bf6e5b090a4dacd
diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2
index 7ecd58f77d9e..d5723343eb4e 100644
--- a/metadata/md5-cache/sci-biology/njplot-2.3-r2
+++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2
@@ -8,5 +8,5 @@ LICENSE=public-domain
RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=c70b49c7f5e1a92f5169df372f9638c6
diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1
index 752251c4d68c..f46d3ce6e531 100644
--- a/metadata/md5-cache/sci-biology/pals-1.0-r1
+++ b/metadata/md5-cache/sci-biology/pals-1.0-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=public-domain
SLOT=0
SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=b0df20d47905df6a290c5fe2f79fd48b
diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1
index ba084c37c5da..9830964c13e0 100644
--- a/metadata/md5-cache/sci-biology/paml-4.4c-r1
+++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=free-noncomm
SLOT=0
SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz
-_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb versionator 2352c3fc97241f6a02042773c8287748
_md5_=c46d709378282d4ccbb567aaa00ee01a
diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2
index bd834b7249a0..22b86648db2e 100644
--- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2
+++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2
@@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk
RESTRICT=fetch
SLOT=0
SRC_URI=phrap-1.080812-distrib.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=8f5aa73e6a49ffbd5804d4ddea05b2b8
diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1
index 343e35235ab8..43ea81f56e45 100644
--- a/metadata/md5-cache/sci-biology/phred-071220-r1
+++ b/metadata/md5-cache/sci-biology/phred-071220-r1
@@ -7,5 +7,5 @@ LICENSE=phrap
RESTRICT=fetch
SLOT=0
SRC_URI=phred-dist-071220.b-acd.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=6cb07f602eee34da61fd893818f30936
diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1
index 6476fa7c118c..5aa90af3294f 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.69-r1
+++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1
@@ -8,5 +8,5 @@ LICENSE=free-noncomm
RDEPEND=x11-libs/libXaw
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=b42cd8579055d407d2b75b6dccdf2c7a
diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1
index bf0ec7ac0abd..20f92e551f61 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.696-r1
+++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1
@@ -8,5 +8,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=0e36eb92b11c05e1704acd5ce863d792
diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r2 b/metadata/md5-cache/sci-biology/phylip-3.696-r2
index 0e1bce80513e..42d412dad5e2 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.696-r2
+++ b/metadata/md5-cache/sci-biology/phylip-3.696-r2
@@ -8,5 +8,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw !!dev-lang/elixir
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=33ab1d7ce3016bdb569e9fd1a4fd5d90
diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
index 0ac9102ce419..9d64a9461c09 100644
--- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
+++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
@@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7
diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103
index c6e0e29695b3..e3d1c7125ce0 100644
--- a/metadata/md5-cache/sci-biology/picard-1.103
+++ b/metadata/md5-cache/sci-biology/picard-1.103
@@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons
RESTRICT=!test? ( test ) !test? ( test )
SLOT=0
SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 16d46032afaca1d6d0621f82084880cb ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 16d46032afaca1d6d0621f82084880cb ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=09627e6bb74ee9997324bde01a56bcbd
diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1
index 7d33f75d5648..f9fc8aaaa973 100644
--- a/metadata/md5-cache/sci-biology/piler-1.0-r1
+++ b/metadata/md5-cache/sci-biology/piler-1.0-r1
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals
SLOT=0
SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=7b5a6d618aac08240cf165a04509c319
diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1
index 4d44b1fa5ecc..84c7420e6cae 100644
--- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1
+++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=public-domain
SLOT=0
SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=d9f7901d3776c424cfb93782cc6ddafa
diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514
index e05ea277156b..5b48bdcee181 100644
--- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514
+++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack
SLOT=0
SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=570249dc23feeff7b47b3e81df358196
diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1
index 96cd1c6e836f..793985885507 100644
--- a/metadata/md5-cache/sci-biology/poa-2-r1
+++ b/metadata/md5-cache/sci-biology/poa-2-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=ab2bece5c6a9c68d3f07555c962d382d
diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603
index 326147933190..e70262ecaa61 100644
--- a/metadata/md5-cache/sci-biology/prank-140603
+++ b/metadata/md5-cache/sci-biology/prank-140603
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-3
SLOT=0
SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=17023476000980284365a9c0ed04a6f0
diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7
index 9b3a24043d85..1f3f7e95ff7e 100644
--- a/metadata/md5-cache/sci-biology/primer3-2.3.7
+++ b/metadata/md5-cache/sci-biology/primer3-2.3.7
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=e79ee4774138e651c83467c2b2cb2926
diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1
index d75d0432b5f8..a2c33d9197d6 100644
--- a/metadata/md5-cache/sci-biology/probcons-1.12-r1
+++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot
SLOT=0
SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=19a24bd3c543d599d5b3392e66b7022e
diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3
index 9744edfdbd67..ff4c479f7a74 100644
--- a/metadata/md5-cache/sci-biology/prodigal-2.6.3
+++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3
@@ -6,5 +6,5 @@ KEYWORDS=~amd64
LICENSE=GPL-3
SLOT=0
SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=9cea3bcc55e864076d7e4b542f657f96
diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39
index aea465aac86d..fe3b107c7225 100644
--- a/metadata/md5-cache/sci-biology/profphd-1.0.39
+++ b/metadata/md5-cache/sci-biology/profphd-1.0.39
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils
SLOT=0
SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8e866cc812e134cdc7a7837e5b60aa21
diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40
index 0264d8ec7abe..748fceae938f 100644
--- a/metadata/md5-cache/sci-biology/profphd-1.0.40
+++ b/metadata/md5-cache/sci-biology/profphd-1.0.40
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils
SLOT=0
SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b641a6cfd444fa4b83d5963246948636
diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4
index fe41e0a5ae43..969b639a5abb 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.4
+++ b/metadata/md5-cache/sci-biology/psipred-3.4
@@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=44623bcd0b50824824056739420b4873
diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5
index 88351fd10ebe..98691249131b 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.5
+++ b/metadata/md5-cache/sci-biology/psipred-3.5
@@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=44623bcd0b50824824056739420b4873
diff --git a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
index 25b5f07ef147..5b0f05044668 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.12.0.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
@@ -10,5 +10,5 @@ RDEPEND==sci-libs/htslib-1.5*:= python_targets_python3_6? ( dev-lang/python:3.6
REQUIRED_USE=|| ( python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/p/pysam/pysam-0.12.0.1.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 89b310c534a033a3566e0f26419daa81 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 44725b3eb803b8abcd6978759c231210 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=73a20e2f0964572bf64b569361b1235c
diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
index 2912ae59acbd..cfdd2e485ed2 100644
--- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
+++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl sci-biology/hmmer:2
SLOT=0
SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=fdc52d5355060d858ec78d793dc26d81
diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6
index 2e2bf4b1c50e..baaff8eaa3f0 100644
--- a/metadata/md5-cache/sci-biology/raxml-7.2.6
+++ b/metadata/md5-cache/sci-biology/raxml-7.2.6
@@ -8,5 +8,5 @@ LICENSE=GPL-2
REQUIRED_USE=cpu_flags_x86_sse3
SLOT=0
SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f2b8e0b4e5701d9b20bcbf9151c9b868
diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08
index 2be4396cb587..cd3aa677b94d 100644
--- a/metadata/md5-cache/sci-biology/recon-1.08
+++ b/metadata/md5-cache/sci-biology/recon-1.08
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=2ddd537d912c7c88b6f0b0d203a51613
diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1
index 5ba8a8ad03ec..9030ccbb9514 100644
--- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1
+++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1
@@ -8,5 +8,5 @@ LICENSE=OSL-2.1
RDEPEND=dev-libs/boost
SLOT=0
SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz https://dev.gentoo.org/~mgorny/dist/rmblast-1.2-gcc47.patch.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1283e94bf3a231a794a498d2769aaa7d
diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4
index 9a9483779f14..ee0f8338d834 100644
--- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4
+++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=public-domain
SLOT=0
SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=788c156d45287bef4f6aa876055bde4c
diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
index 5f9c99d7f3f6..429f5dca73f9 100644
--- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
+++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
@@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-l
REQUIRED_USE=^^ ( python_single_target_python2_7 )
SLOT=0.1-legacy
SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=fa48f0b2be780a9264eb9d727ec53335
diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5
index 4aee8e750e9a..ca2dafee6528 100644
--- a/metadata/md5-cache/sci-biology/samtools-1.5
+++ b/metadata/md5-cache/sci-biology/samtools-1.5
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib py
REQUIRED_USE=|| ( python_targets_python2_7 )
SLOT=0
SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=8d92b4a814f62eab87bac2be22c2470c
diff --git a/metadata/md5-cache/sci-biology/samtools-1.9-r1 b/metadata/md5-cache/sci-biology/samtools-1.9-r1
index ddee2de050d5..4f723329b771 100644
--- a/metadata/md5-cache/sci-biology/samtools-1.9-r1
+++ b/metadata/md5-cache/sci-biology/samtools-1.9-r1
@@ -10,5 +10,5 @@ LICENSE=MIT
RDEPEND=dev-lang/perl =sci-libs/htslib-1.9* sys-libs/ncurses:0= sys-libs/zlib:=
SLOT=0
SRC_URI=mirror://sourceforge/samtools/samtools-1.9.tar.bz2
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=e33fcb6672676516fd35c5f382d9edc1
diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5
index dce490f8db29..a56eb07ee776 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.3.5
+++ b/metadata/md5-cache/sci-biology/seaview-4.3.5
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=38cc02682d853c813df2b6e81cbb51c5
diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4
index db8dff2f1704..ed3617d352c2 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.5.4
+++ b/metadata/md5-cache/sci-biology/seaview-4.5.4
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=38cc02682d853c813df2b6e81cbb51c5
diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6
index dac0a48f0737..98362a937777 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.6
+++ b/metadata/md5-cache/sci-biology/seaview-4.6
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw:2 || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1a6723f1ab0e67cc0d63dd54a902900f
diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
index bb9acc768b8d..3bd78c64b5d6 100644
--- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
+++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
@@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1
RESTRICT=!test? ( test )
SLOT=1.4
SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=1f1cf11ee07a7961e6fa23345e516b65
diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
index bbcb79b83962..6eb18c82d8f5 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
+++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
@@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=16bcf021b05ae673eb5878cdcefd8d8c
diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0
index ca021692ceaa..661196228a43 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.4.0
+++ b/metadata/md5-cache/sci-biology/seqan-2.4.0
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/s
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=ca34cde2b2fc2f8692469a016bc077f6
diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999
index 7a99cdd36c56..54eed6a08407 100644
--- a/metadata/md5-cache/sci-biology/seqan-9999
+++ b/metadata/md5-cache/sci-biology/seqan-9999
@@ -9,5 +9,5 @@ PROPERTIES=live
RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 git-r3 86a0188f2ad9eb3d65e4d031ab8a0422 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 c26f95a5042de003dc58bef955e41c88 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=954c2a9b05e60f6a61eb27c1cc720117
diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3
index 59c419cf1fe3..ecbf557b12a5 100644
--- a/metadata/md5-cache/sci-biology/shrimp-2.2.3
+++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3
@@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_single_target_python2_7? ( >=dev-lang/p
REQUIRED_USE=^^ ( python_single_target_python2_7 )
SLOT=0
SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 2d2617a730e75e491e1d17af87841ec5 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=98a7a2b9765ad5e245b1b7b9be67060b
diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20
index 0e8abedba8a7..d0ec911095f9 100644
--- a/metadata/md5-cache/sci-biology/sibsim4-0.20
+++ b/metadata/md5-cache/sci-biology/sibsim4-0.20
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=84a29c8972011ec4b86f3c8235a7b5d2
diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2
index e98a5cca79fd..08a4ba16aa27 100644
--- a/metadata/md5-cache/sci-biology/sim4-20030921-r2
+++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~ppc ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://gentoo/sim4-20030921.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=d9ac88a2e3ccc00187d880fcca7f5db2
diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1
index 85b885e5318c..203a96958af2 100644
--- a/metadata/md5-cache/sci-biology/stride-20011129-r1
+++ b/metadata/md5-cache/sci-biology/stride-20011129-r1
@@ -7,5 +7,5 @@ LICENSE=STRIDE
RESTRICT=mirror bindist
SLOT=0
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=897f9fd1d73b5a7779f29a7ca161cb75
diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
index 1a5bb8297c38..ae9799033648 100644
--- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
+++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
@@ -7,5 +7,5 @@ LICENSE=GPL-2
RDEPEND=sci-biology/clustalw sci-chemistry/tm-align
SLOT=0
SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=5c54b109c5b8bef93adbc5f99ddd7114
diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2
index b9953487ebf7..9adbe952ac98 100644
--- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2
+++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2
@@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi )
RESTRICT=test
SLOT=0
SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=8bd164fc83c9bb1d9a2e9559a47ff526
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index d096a1e0ed28..dfcc52eb42c3 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.0[X]
SLOT=0
SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets e1e6e1eb5b3d911b3abd712f611e2312
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets e1e6e1eb5b3d911b3abd712f611e2312
_md5_=ce129f3e61a849cfd3654e5a9fa4b17a
diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31
index bd9b9dd16882..8af881d6500c 100644
--- a/metadata/md5-cache/sci-biology/trnascan-se-1.31
+++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz
-_eclasses_=multilib 0914eab919f4f11dd9e0407b92af4726 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=3f4bcdf31fe276f90a95e2f4b311deae
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40
index 8d569f1c8e1e..a7a7d2f64d90 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40
@@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
LICENSE=public-domain
SLOT=0
SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 7555f0a45c22f33391d9c0c80f57cf23 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=6adcbb8c658bdc3c40f797c61f5c58b0
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
index 8a056034c77b..0a359680b9ec 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
@@ -10,5 +10,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows
REQUIRED_USE=server? ( mysql )
SLOT=0
SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
_md5_=ecc35fd7ec196a9e5cce4c0c51af618f
diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1
index bd9139b7bceb..87f6647ac201 100644
--- a/metadata/md5-cache/sci-biology/unafold-3.8-r1
+++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=unafold
SLOT=0
SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f6e357557efc2f86eab0adadd32142ce
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14
index ad8da6c5504c..596372408894 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.14
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14
@@ -9,5 +9,5 @@ LICENSE=LGPL-3
RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
SLOT=0
SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=82adffd84f2a93745e683b498b79fbe8
diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10
index a0fe49614f65..a057094a5d10 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.2.10
+++ b/metadata/md5-cache/sci-biology/velvet-1.2.10
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic f1194291b9a1baca337c1c89b5f7f365 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=420632435bf1efe77241192fff993a20
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
index 8275fc678345..7938cb23c810 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 89b310c534a033a3566e0f26419daa81 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 44725b3eb803b8abcd6978759c231210 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=1e58c830b49ced05ae9960fcc2dead13
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
index 753d71e20b6c..d82c646fdfb8 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 89b310c534a033a3566e0f26419daa81 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 0914eab919f4f11dd9e0407b92af4726 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 44725b3eb803b8abcd6978759c231210 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8386b016a2b3bbefa88443fdaa898057 python-utils-r1 ace0a9a129fcfeaae542c0d15c07f36a toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker b5891c9326ad2e7905c011d44c927c34 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=b2a6486af275e75c6365ab7eeba1e0bd
diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
index 9e6018e37192..063894d236f3 100644
--- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
+++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=net-libs/libtirpc x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl
SLOT=0
SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=cb4182fc2947f2a3efa19db296a6a76f
diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
index 3bae73c851b0..cfe1ceba1e89 100644
--- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
+++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
@@ -9,5 +9,5 @@ LICENSE=BSD
RDEPEND=~sci-biology/hmmer-2.3.2
SLOT=0
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2
-_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 0914eab919f4f11dd9e0407b92af4726 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=5089373e8fa38f080134e22ddf59264c
diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2
index f4deaac5cbc2..8a84c1a24ef0 100644
--- a/metadata/md5-cache/sci-biology/yass-1.14-r2
+++ b/metadata/md5-cache/sci-biology/yass-1.14-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dmalloc? ( dev-libs/dmalloc )
SLOT=0
SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz
-_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 0914eab919f4f11dd9e0407b92af4726 toolchain-funcs d3e75048a89c0445838d2f44e5c65d97
+_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb
_md5_=3a4ba9b4e7b8efec51cfc79d261fefd3