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authorV3n3RiX <venerix@redcorelinux.org>2019-09-15 09:01:56 +0100
committerV3n3RiX <venerix@redcorelinux.org>2019-09-15 09:01:56 +0100
commite8f81810baa21f490d6910e8e2d424546b72a333 (patch)
treedb79151c528a566490ffcac0d7b64484e12b4762 /metadata/md5-cache/sci-biology
parentd00821e77f72d4af4ea30158c1c6e18ffff0875b (diff)
gentoo resync : 15.09.2019
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/ApE-2.0.7-r12
-rw-r--r--metadata/md5-cache/sci-biology/GBrowse-2.48-r12
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-0.9.12
-rw-r--r--metadata/md5-cache/sci-biology/HTSeq-99992
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin32913 -> 32567 bytes
-rw-r--r--metadata/md5-cache/sci-biology/STAR-2.5.3a2
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.0.32
-rw-r--r--metadata/md5-cache/sci-biology/amap-2.2-r32
-rw-r--r--metadata/md5-cache/sci-biology/amos-3.1.0-r42
-rw-r--r--metadata/md5-cache/sci-biology/ariadne-1.3-r32
-rw-r--r--metadata/md5-cache/sci-biology/augustus-2.5.52
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-2.5.12
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-99992
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.52
-rw-r--r--metadata/md5-cache/sci-biology/bcftools-1.92
-rw-r--r--metadata/md5-cache/sci-biology/bedtools-2.26.02
-rw-r--r--metadata/md5-cache/sci-biology/bfast-0.7.0a2
-rw-r--r--metadata/md5-cache/sci-biology/biogrep-1.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/biopandas-0.2.12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.682
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.712
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.732
-rw-r--r--metadata/md5-cache/sci-biology/bioruby-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/bioruby-1.5.22
-rw-r--r--metadata/md5-cache/sci-biology/blat-34-r22
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-1.1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/bowtie-2.2.92
-rw-r--r--metadata/md5-cache/sci-biology/bwa-0.7.16a2
-rw-r--r--metadata/md5-cache/sci-biology/cd-hit-4.6.62
-rw-r--r--metadata/md5-cache/sci-biology/clustal-omega-1.2.42
-rw-r--r--metadata/md5-cache/sci-biology/clustalw-1.83-r42
-rw-r--r--metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r22
-rw-r--r--metadata/md5-cache/sci-biology/clustalx-2.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/consed-292
-rw-r--r--metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r22
-rw-r--r--metadata/md5-cache/sci-biology/dialign2-2.2.12
-rw-r--r--metadata/md5-cache/sci-biology/diya-1.0_rc42
-rw-r--r--metadata/md5-cache/sci-biology/elph-1.0.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domalign-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domsearch-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-emnu-1.05.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-meme-4.7.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-mse-3.0.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-signature-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-structure-0.1.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-topo-2.0.6602
-rw-r--r--metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.6602
-rw-r--r--metadata/md5-cache/sci-biology/emboss-6.6.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/eugene-4.1d2
-rw-r--r--metadata/md5-cache/sci-biology/exonerate-2.2.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/express-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/fasta-36.3.5e2
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.82
-rw-r--r--metadata/md5-cache/sci-biology/fastx_toolkit-0.0.142
-rw-r--r--metadata/md5-cache/sci-biology/finchtv-1.3.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/foldingathome-7.5.12
-rw-r--r--metadata/md5-cache/sci-biology/gatk-2.42
-rw-r--r--metadata/md5-cache/sci-biology/gatk-99992
-rw-r--r--metadata/md5-cache/sci-biology/gibbs-3.12
-rw-r--r--metadata/md5-cache/sci-biology/glimmer-3.02-r32
-rw-r--r--metadata/md5-cache/sci-biology/glimmer-3.02b2
-rw-r--r--metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r12
-rw-r--r--metadata/md5-cache/sci-biology/goby-1.9.7.3-r113
-rw-r--r--metadata/md5-cache/sci-biology/goby-1.9.8.1-r113
-rw-r--r--metadata/md5-cache/sci-biology/goby-cpp-1.9.7.32
-rw-r--r--metadata/md5-cache/sci-biology/goby-cpp-1.9.8.12
-rw-r--r--metadata/md5-cache/sci-biology/goby-cpp-2.0.12
-rw-r--r--metadata/md5-cache/sci-biology/iedera-1.05-r12
-rw-r--r--metadata/md5-cache/sci-biology/kalign-2.03-r22
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-0.43.12
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-99992
-rw-r--r--metadata/md5-cache/sci-biology/lagan-2.0-r32
-rw-r--r--metadata/md5-cache/sci-biology/last-2302
-rw-r--r--metadata/md5-cache/sci-biology/last-299-r12
-rw-r--r--metadata/md5-cache/sci-biology/libgtextutils-0.6.12
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.0502
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.2152
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.3052
-rw-r--r--metadata/md5-cache/sci-biology/maq-0.7.1-r22
-rw-r--r--metadata/md5-cache/sci-biology/maqview-0.2.5-r32
-rw-r--r--metadata/md5-cache/sci-biology/mcl-08.3122
-rw-r--r--metadata/md5-cache/sci-biology/mcl-12.1352
-rw-r--r--metadata/md5-cache/sci-biology/mcl-14.1372
-rw-r--r--metadata/md5-cache/sci-biology/meme-4.11.2_p22
-rw-r--r--metadata/md5-cache/sci-biology/mira-4.0.22
-rw-r--r--metadata/md5-cache/sci-biology/mosaik-2.2.302
-rw-r--r--metadata/md5-cache/sci-biology/mothur-1.27.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/mrbayes-3.1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/mrbayes-3.1.2-r22
-rw-r--r--metadata/md5-cache/sci-biology/mummer-3.232
-rw-r--r--metadata/md5-cache/sci-biology/muscle-3.8.312
-rw-r--r--metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r22
-rw-r--r--metadata/md5-cache/sci-biology/njplot-2.3-r22
-rw-r--r--metadata/md5-cache/sci-biology/pals-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/paml-4.4c-r12
-rw-r--r--metadata/md5-cache/sci-biology/phrap-1.080812-r22
-rw-r--r--metadata/md5-cache/sci-biology/phred-071220-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.69-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.696-r12
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.696-r22
-rw-r--r--metadata/md5-cache/sci-biology/phyml-2.4.5-r32
-rw-r--r--metadata/md5-cache/sci-biology/picard-1.1032
-rw-r--r--metadata/md5-cache/sci-biology/piler-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/pilercr-1.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/plink-1.07-r12
-rw-r--r--metadata/md5-cache/sci-biology/plink-1.90_pre1405142
-rw-r--r--metadata/md5-cache/sci-biology/poa-2-r12
-rw-r--r--metadata/md5-cache/sci-biology/prank-1406032
-rw-r--r--metadata/md5-cache/sci-biology/primer3-2.3.72
-rw-r--r--metadata/md5-cache/sci-biology/probcons-1.12-r12
-rw-r--r--metadata/md5-cache/sci-biology/prodigal-2.6.32
-rw-r--r--metadata/md5-cache/sci-biology/profphd-1.0.392
-rw-r--r--metadata/md5-cache/sci-biology/profphd-1.0.402
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.2.12
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.32
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.42
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.52
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.12.0.12
-rw-r--r--metadata/md5-cache/sci-biology/qrna-2.0.3c-r32
-rw-r--r--metadata/md5-cache/sci-biology/raxml-7.2.62
-rw-r--r--metadata/md5-cache/sci-biology/recon-1.082
-rw-r--r--metadata/md5-cache/sci-biology/rmblast-1.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/rnaview-20040713-r42
-rw-r--r--metadata/md5-cache/sci-biology/samtools-0.1.20-r32
-rw-r--r--metadata/md5-cache/sci-biology/samtools-1.52
-rw-r--r--metadata/md5-cache/sci-biology/samtools-1.92
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.3.52
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.5.42
-rw-r--r--metadata/md5-cache/sci-biology/seaview-4.62
-rw-r--r--metadata/md5-cache/sci-biology/seqan-1.4.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.2.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.4.02
-rw-r--r--metadata/md5-cache/sci-biology/seqan-99992
-rw-r--r--metadata/md5-cache/sci-biology/shrimp-2.0.12
-rw-r--r--metadata/md5-cache/sci-biology/shrimp-2.2.32
-rw-r--r--metadata/md5-cache/sci-biology/sibsim4-0.202
-rw-r--r--metadata/md5-cache/sci-biology/sim4-20030921-r22
-rw-r--r--metadata/md5-cache/sci-biology/stride-20011129-r12
-rw-r--r--metadata/md5-cache/sci-biology/t-coffee-11.00-r22
-rw-r--r--metadata/md5-cache/sci-biology/tophat-2.1.1-r42
-rw-r--r--metadata/md5-cache/sci-biology/tree-puzzle-5.22
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/trnascan-se-1.312
-rw-r--r--metadata/md5-cache/sci-biology/uchime-4.2.402
-rw-r--r--metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r12
-rw-r--r--metadata/md5-cache/sci-biology/unafold-3.8-r12
-rw-r--r--metadata/md5-cache/sci-biology/vcftools-0.1.142
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.0.18-r12
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.2.102
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.12
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.82
-rw-r--r--metadata/md5-cache/sci-biology/wgs-assembler-7.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/wise-2.4.0_alpha2
-rw-r--r--metadata/md5-cache/sci-biology/yass-1.14-r22
170 files changed, 167 insertions, 193 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
index 2ed1bed63ca9..69a7b2bdc039 100644
--- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
+++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1
@@ -9,5 +9,5 @@ RDEPEND=dev-lang/tcl:0 dev-lang/tk:0
RESTRICT=mirror
SLOT=0
SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bf78ab8abbdb34e4f7d5c8a0b4429c0f
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
index 8b4f324f2bd9..876d406c3232 100644
--- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
+++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15
SLOT=0
SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
_md5_=bccaeef3292f6df307fc14fb5a2a74b2
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
index b270f1717c1b..a1fa95114f22 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-0.9.1
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
@@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/H/HTSeq/HTSeq-0.9.1.tar.gz
-_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=41aaefa741e4fde04bbda02ac66eba05
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index 8283a1a580cc..ede19bbd3db6 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -9,5 +9,5 @@ PROPERTIES=live
RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
-_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 git-r3 562b380fc59ae6a8622171d0acb777d1 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 git-r3 562b380fc59ae6a8622171d0acb777d1 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=41aaefa741e4fde04bbda02ac66eba05
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index ad28966544e3..44140ac5bc45 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/STAR-2.5.3a b/metadata/md5-cache/sci-biology/STAR-2.5.3a
index 006e327c5d4e..49b651bb2448 100644
--- a/metadata/md5-cache/sci-biology/STAR-2.5.3a
+++ b/metadata/md5-cache/sci-biology/STAR-2.5.3a
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sci-libs/htslib:=
SLOT=0
SRC_URI=https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz -> STAR-2.5.3a.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=1eb821b9192887ab1f2ac6b1536037ac
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
index 4f4fd6e52563..c9bc558517c2 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
+++ b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1
@@ -9,5 +9,5 @@ LICENSE=abyss
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.2.tar.gz -> abyss-2.0.2.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=3b173739bd4e2f9d61a49918b3b8bc05
diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3 b/metadata/md5-cache/sci-biology/abyss-2.0.3
index 3417ca2cbc49..d31e6048167d 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.0.3
+++ b/metadata/md5-cache/sci-biology/abyss-2.0.3
@@ -9,5 +9,5 @@ LICENSE=abyss
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi )
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=4c70cbdf60d5dc2d564272b103f2b469
diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3
index f32f0f9ec7cd..8b29c255acc3 100644
--- a/metadata/md5-cache/sci-biology/amap-2.2-r3
+++ b/metadata/md5-cache/sci-biology/amap-2.2-r3
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 )
SLOT=0
SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=6bd792e8b76c06ee993b88f83e48b907
diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4
index ae52235be029..5d3457d65d94 100644
--- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4
+++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=aec6d1c76d5ea621c66e803800e2b3c4
diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r3 b/metadata/md5-cache/sci-biology/ariadne-1.3-r3
index 9f96a63c95b5..192053716dfe 100644
--- a/metadata/md5-cache/sci-biology/ariadne-1.3-r3
+++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r3
@@ -9,5 +9,5 @@ LICENSE=ARIADNE
RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1
SLOT=0
SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=a99266aecef97d81f48df25aa43fbb4a
diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5
index 345b8159d782..a1f2e6917193 100644
--- a/metadata/md5-cache/sci-biology/augustus-2.5.5
+++ b/metadata/md5-cache/sci-biology/augustus-2.5.5
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86
LICENSE=Artistic
SLOT=0
SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5660f556708e8c3b5d43c9ef832e66ec
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.1 b/metadata/md5-cache/sci-biology/bamtools-2.5.1
index 1ba445ec7569..bf92d3ff9cee 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.1
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.1
@@ -10,5 +10,5 @@ LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/2.5.1
SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.1.tar.gz -> bamtools-2.5.1.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=bddaa64daf006313f77c6152fbc41a8b
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index 3469ed54ea80..3c15fd5ebae4 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -9,5 +9,5 @@ LICENSE=MIT
PROPERTIES=live
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/9999
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca git-r3 562b380fc59ae6a8622171d0acb777d1 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca git-r3 562b380fc59ae6a8622171d0acb777d1 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=bddaa64daf006313f77c6152fbc41a8b
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.5 b/metadata/md5-cache/sci-biology/bcftools-1.5
index 48995eb587da..5920f4bcc035 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.5
+++ b/metadata/md5-cache/sci-biology/bcftools-1.5
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_pytho
REQUIRED_USE=|| ( python_targets_python2_7 )
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2
-_eclasses_=multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=e289371e3fec376baf8fe36c652ca521
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.9 b/metadata/md5-cache/sci-biology/bcftools-1.9
index 00787d4f7db8..f8b1d8a04cba 100644
--- a/metadata/md5-cache/sci-biology/bcftools-1.9
+++ b/metadata/md5-cache/sci-biology/bcftools-1.9
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_targets_pyt
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=67c63191569c3370d6eca3ec783afbea
diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0
index 05300af02f4d..cdb4c1aaa37f 100644
--- a/metadata/md5-cache/sci-biology/bedtools-2.26.0
+++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz https://dev.gentoo.org/~mgorny/dist/bedtools-2.26.0-fix-buildsystem.patch.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=93c7c9cb11de4ad32cab7183dc2e6512
diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a
index 433e87463e41..fe2b76bd459b 100644
--- a/metadata/md5-cache/sci-biology/bfast-0.7.0a
+++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-perl/XML-Simple
SLOT=0
SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=abc362f15c5107d96bedfb879ea0375f
diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2
index 71c4cf5e8591..3521e0a1c236 100644
--- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2
+++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf )
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=9731727dae2a2514bcaa486b0059272e
diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1
index 705641f78a9e..2ad3b4e8fdcd 100644
--- a/metadata/md5-cache/sci-biology/biopandas-0.2.1
+++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1
@@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz
-_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=5a0449fad95f6d2e6b0930487808e8ef
diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9
index a892e48bc0ca..18b760c1c5d3 100644
--- a/metadata/md5-cache/sci-biology/bioperl-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9
@@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr
REQUIRED_USE=minimal? ( !graphviz )
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=be22a76392a6e5c121e4b6d388045faa
diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1
index a26d6adbe708..5f83565f93d5 100644
--- a/metadata/md5-cache/sci-biology/bioperl-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1
@@ -9,5 +9,5 @@ PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-d
PROPERTIES=live
RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=210415961127105f0fc625670ba9e423
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
index b00eb65ee89d..9969be3ef325 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=2470d7ecf1b6ff1902a8d74057748480
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
index 4a4f2a84d690..93e7fc3656d2 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
@@ -7,5 +7,5 @@ LICENSE=Artistic GPL-2
PROPERTIES=live
RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=fd4229be06b3975302e9e37ca35601d2
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
index a5d376f16884..94e35253579d 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=cb366a6a0c6cf3c12320c2d6d3551abe
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
index 7c827c379486..3ab3c8ed5a5d 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
@@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2
PROPERTIES=live
RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=025cd5fa89be402f3296160dbf755c8b
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
index 21710d8de413..d5c662779e2d 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=9caec4e5b47cbf306a1689903f2a018a
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
index 9c4f6e06629f..0b182d067165 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
@@ -9,5 +9,5 @@ PROPERTIES=live
RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/XML-Twig dev-perl/IO-String dev-perl/IPC-Run ) dev-lang/perl:=[-build(-)]
RESTRICT=test
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=26abe4f8477c1a1c22bd8515484ce1c1
diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68
index bc5e777b711c..f4102463fcd0 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.68
+++ b/metadata/md5-cache/sci-biology/biopython-1.68
@@ -10,5 +10,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target
REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_python3_5 )
SLOT=0
SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 9838160d624a44b2d56d1266a69fd473 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 9838160d624a44b2d56d1266a69fd473 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=09edbf25123b14fe83187c2577a871a0
diff --git a/metadata/md5-cache/sci-biology/biopython-1.71 b/metadata/md5-cache/sci-biology/biopython-1.71
index 8b064dadc336..4c0c7697d538 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.71
+++ b/metadata/md5-cache/sci-biology/biopython-1.71
@@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.71.tar.gz
-_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 eutils 6e6c2737b59a4b982de6fb3ecefd87f8 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 eutils 6e6c2737b59a4b982de6fb3ecefd87f8 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=c8c05d4c9d3dc460d2dbb68c556d1984
diff --git a/metadata/md5-cache/sci-biology/biopython-1.73 b/metadata/md5-cache/sci-biology/biopython-1.73
index 64720d2b1634..6d83b952d3bd 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.73
+++ b/metadata/md5-cache/sci-biology/biopython-1.73
@@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 python_targets_python3_7 )
SLOT=0
SRC_URI=mirror://pypi/b/biopython/biopython-1.73.tar.gz
-_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 eutils 6e6c2737b59a4b982de6fb3ecefd87f8 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 eutils 6e6c2737b59a4b982de6fb3ecefd87f8 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=c467f0810536bbd7ae60a0ba82fbd422
diff --git a/metadata/md5-cache/sci-biology/bioruby-1.5.1 b/metadata/md5-cache/sci-biology/bioruby-1.5.1
index a7394e96a336..ecaf0823fd9b 100644
--- a/metadata/md5-cache/sci-biology/bioruby-1.5.1
+++ b/metadata/md5-cache/sci-biology/bioruby-1.5.1
@@ -10,5 +10,5 @@ RDEPEND=ruby_targets_ruby24? ( dev-ruby/libxml[ruby_targets_ruby24] ) ruby_targe
REQUIRED_USE=|| ( ruby_targets_ruby24 )
SLOT=0
SRC_URI=mirror://rubygems/bio-1.5.1.gem
-_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e ruby-fakegem f2b7caee23dbd528a62d0839d8c26c34 ruby-ng a28f4a400304e633468f10ad1b9e2f6e ruby-utils 5b782a86f95c84466cdb53f8c8a8be37 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e ruby-fakegem f2b7caee23dbd528a62d0839d8c26c34 ruby-ng a28f4a400304e633468f10ad1b9e2f6e ruby-utils 5b782a86f95c84466cdb53f8c8a8be37 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=2aecf9a558ab9d1f3e8760530ccd8e56
diff --git a/metadata/md5-cache/sci-biology/bioruby-1.5.2 b/metadata/md5-cache/sci-biology/bioruby-1.5.2
index 39200ec9c6d5..2b288d42e1a7 100644
--- a/metadata/md5-cache/sci-biology/bioruby-1.5.2
+++ b/metadata/md5-cache/sci-biology/bioruby-1.5.2
@@ -10,5 +10,5 @@ RDEPEND=ruby_targets_ruby24? ( dev-ruby/libxml[ruby_targets_ruby24] ) ruby_targe
REQUIRED_USE=|| ( ruby_targets_ruby24 )
SLOT=0
SRC_URI=mirror://rubygems/bio-1.5.2.gem
-_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e ruby-fakegem f2b7caee23dbd528a62d0839d8c26c34 ruby-ng a28f4a400304e633468f10ad1b9e2f6e ruby-utils 5b782a86f95c84466cdb53f8c8a8be37 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e ruby-fakegem f2b7caee23dbd528a62d0839d8c26c34 ruby-ng a28f4a400304e633468f10ad1b9e2f6e ruby-utils 5b782a86f95c84466cdb53f8c8a8be37 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=4588868f94109a54952cb9e4d284c53d
diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2
index 3d4d8c03cb11..5dde055392e9 100644
--- a/metadata/md5-cache/sci-biology/blat-34-r2
+++ b/metadata/md5-cache/sci-biology/blat-34-r2
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=blat
SLOT=0
SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=d48361335699038107318f5ca57533e8
diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
index 9c3fce879ef7..220dc1e12eaa 100644
--- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
+++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1
@@ -9,5 +9,5 @@ LICENSE=Artistic
RDEPEND=tbb? ( dev-cpp/tbb )
SLOT=1
SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=069dc133bc01cabadeda1e327034b7a7
diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9
index 2a5c046acc44..fdf440085e44 100644
--- a/metadata/md5-cache/sci-biology/bowtie-2.2.9
+++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb )
SLOT=2
SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=46d87c867cd445707dc1913cf3dd7eb6
diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.16a b/metadata/md5-cache/sci-biology/bwa-0.7.16a
index c6a8f4182742..9e42be3cc5a1 100644
--- a/metadata/md5-cache/sci-biology/bwa-0.7.16a
+++ b/metadata/md5-cache/sci-biology/bwa-0.7.16a
@@ -7,5 +7,5 @@ LICENSE=GPL-3
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.16a.tar.bz2
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=b3702a6accf64398e32e84076031919b
diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
index 2fd44585f728..93f7cec64559 100644
--- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6
+++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bbe0ae10275a73485487e08f19f4ac1b
diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
index 813477c825c4..5c385f8bd882 100644
--- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
+++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-libs/argtable
SLOT=0
SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=9ade45d2e283bc5fcc7eef16725e18ae
diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4
index 7d34e575f478..0817d8e2cefa 100644
--- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4
+++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4
@@ -6,5 +6,5 @@ KEYWORDS=alpha amd64 ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~spa
LICENSE=clustalw
SLOT=1
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=5c8ba46cd87128b1ddae72e6ca3d07db
diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
index e948d0d0f923..56752bdf3aae 100644
--- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
+++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=virtual/mpi
SLOT=0
SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=9e376a1d2ae782d9495b0c6c318aa097
diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3
index 6b13230f660c..9ad2c9cbf248 100644
--- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3
+++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3
RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1
SLOT=0
SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e qmake-utils bdf97e69a34b864d6d545f4ec3143ff7 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e qmake-utils bdf97e69a34b864d6d545f4ec3143ff7 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=c8dbd602c40010526edb4955aa67e1b3
diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29
index c144a72b540b..279c50702d66 100644
--- a/metadata/md5-cache/sci-biology/consed-29
+++ b/metadata/md5-cache/sci-biology/consed-29
@@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan
RESTRICT=fetch
SLOT=0
SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1e30f1827727dab34c75c8c026745369
diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
index 89b0d7306fc3..70587e5a35f7 100644
--- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
+++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=b04d9beffea802bb82f896df101ca660
diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1
index 2604ed3e355a..f0f0b8c9191b 100644
--- a/metadata/md5-cache/sci-biology/dialign2-2.2.1
+++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=3761a69a47f38308f54ae0b051361ed6
diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4
index 5a383af8211c..5cf81af83802 100644
--- a/metadata/md5-cache/sci-biology/diya-1.0_rc4
+++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal? ( sci-biology/mummer sci-biology/glimmer sci-biology/trnascan-se sci-biology/infernal ) dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5d4639d7c08c43e2c2208492508fd56c
diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1
index 410c8a6efce0..eff686f4ccc6 100644
--- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1
+++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos
LICENSE=Artistic
SLOT=0
SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=dbee2f511488caf9eadadb20d043a2da
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
index 88ef1e4c133c..80aa76cb14b1 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4166ba28131fdf70907b31300aa4c08b
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
index 6aa769c624ec..637589324f63 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=ef491b452e56be12961f62b16961f4f1
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
index bf2503df98be..e97de30936ca 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
index 7d7a3db0e9a3..1a5d5ede7113 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=9f8b2caa273f4ae3b0463e6de6782660
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
index 5fc2cfaa111e..35c092e9142b 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=920906439fbc5278460201b23a615736
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
index 4ffa44f22d75..aaf7c2895462 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=d82c7c44ec76fa5d6165769a73e5df9a
diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
index f8664a8314e5..2838cb577ef8 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1b156bed7ea031aeb5464836dd987f18
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
index 74caa6d67448..142a9fcfcb7f 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=83d02ae22d4e1864669639d9289cd112
diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
index 24086aa5f96c..28e9cb44abdd 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=73b0c29964ea3506d18ef6b6c8df70e1
diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
index 546be50eacee..79120ff24c14 100644
--- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
+++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b18db6d7a2159272c7b69d34a14dc9b5
diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
index d09708fe6c24..44ae943e645c 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=84df94b7c4b0f044de45cef524cbf453
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
index ba2c57e6651e..2b06c701c81a 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 freedist
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=00620d36fbf4790dc2ecfb240ba9816c
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
index 2c7293cf9070..ba5c41b604ab 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4cb685046b5a39b624eb3467b815c2c4
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
index bcc647e37fd3..80a7b8b7539c 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=634d624be78f958ed7fca02e7dc43bd4
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
index afe635ffae58..34946b10af48 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=e50220ee11093554b589c1f9f53e7c09
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
index 064da0c1985f..035460b776e3 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
@@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=d257de40bcdb33c0735daac8a5f15fda
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
index 3b6c668b2bba..7d802a95859b 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
@@ -10,5 +10,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci
RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 22ae82e140bdd95d17a34fd5fd733190 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d emboss-r2 4cc77fdd8beda583053fe8bf1a2cc8a5 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 22ae82e140bdd95d17a34fd5fd733190 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=99a47266a2a8f2fd0a874111491146e2
diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d
index ce2229b11f93..f9fbe7a95130 100644
--- a/metadata/md5-cache/sci-biology/eugene-4.1d
+++ b/metadata/md5-cache/sci-biology/eugene-4.1d
@@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0=
RESTRICT=test
SLOT=0
SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=683d1e7f9daeda6cd20b92117330ea81
diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
index 9c78b6922a2e..ab4bb8049014 100644
--- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
+++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2
@@ -10,5 +10,5 @@ RDEPEND=dev-libs/glib:2
REQUIRED_USE=test? ( utils )
SLOT=0
SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=2efd53d13e6f08e4144477038f41e4af
diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1
index 37f083c343fe..39fb7ef14425 100644
--- a/metadata/md5-cache/sci-biology/express-1.5.1
+++ b/metadata/md5-cache/sci-biology/express-1.5.1
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib
SLOT=0
SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=10c478f1e1a9a533322963cf4c2e92f8
diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e
index b6c8c7288eca..15ddc53acfb1 100644
--- a/metadata/md5-cache/sci-biology/fasta-36.3.5e
+++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=fasta
SLOT=0
SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4eed9011a4fc400bdf3adf77be6c8fe2
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8
index f162b8829d10..3986df13f27d 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.8
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8
@@ -9,5 +9,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=5a3e768febbbadcd5c8a4141dd49e11c
diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
index 4396e1957114..d4803d519843 100644
--- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
+++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14
@@ -8,5 +8,5 @@ LICENSE=AGPL-3
RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot
SLOT=0
SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=c3bb0edd6b01a31019cf5fd59e22122a
diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
index 98041514ea38..66f9f81cdb5a 100644
--- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
+++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=finchtv
SLOT=0
SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=08355830f28d1052c2ab527b82a8dd68
diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.5.1 b/metadata/md5-cache/sci-biology/foldingathome-7.5.1
index 7dae174083aa..92dd15ca2157 100644
--- a/metadata/md5-cache/sci-biology/foldingathome-7.5.1
+++ b/metadata/md5-cache/sci-biology/foldingathome-7.5.1
@@ -9,5 +9,5 @@ RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0*
RESTRICT=mirror bindist strip
SLOT=0
SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.5/fahclient_7.5.1-64bit-release.tar.bz2
-_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 user 00484e1be1aac73e24fca1c99557a7d6 versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a user 00484e1be1aac73e24fca1c99557a7d6 versionator 2352c3fc97241f6a02042773c8287748
_md5_=a1c1420f8b9044694473f469d5e750af
diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4
index 442819a93907..7e4497d22799 100644
--- a/metadata/md5-cache/sci-biology/gatk-2.4
+++ b/metadata/md5-cache/sci-biology/gatk-2.4
@@ -9,5 +9,5 @@ LICENSE=MIT
RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3
SLOT=0
SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd versionator 2352c3fc97241f6a02042773c8287748
_md5_=8afea474ed6c1f4ad5ac6d6a18c49542
diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999
index 6984f360630e..dfa24f53d54b 100644
--- a/metadata/md5-cache/sci-biology/gatk-9999
+++ b/metadata/md5-cache/sci-biology/gatk-9999
@@ -8,5 +8,5 @@ LICENSE=MIT
PROPERTIES=live
RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 3aabf18eba60687bbe6855eba271f688 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=df4fa840e567320d0f100f0073200f23
diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1
index a74430b81ad0..403438817b1f 100644
--- a/metadata/md5-cache/sci-biology/gibbs-3.1
+++ b/metadata/md5-cache/sci-biology/gibbs-3.1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 )
SLOT=0
SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=e28918ff8ca46c8b8254e4e36f8d0bcf
diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3
index ecd373c9c074..26a165f25f07 100644
--- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3
+++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3
@@ -7,5 +7,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh
SLOT=0
SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=94600a4de5a2dc02bc6652d958a2a034
diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b
index 00ee2f0119d8..70bddfec53ef 100644
--- a/metadata/md5-cache/sci-biology/glimmer-3.02b
+++ b/metadata/md5-cache/sci-biology/glimmer-3.02b
@@ -7,5 +7,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh sci-biology/elph
SLOT=0
SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=6916d92c69198563f19b744f1e57dddc
diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
index ee1967d644a9..8c8b981211a2 100644
--- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
+++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=Artistic
SLOT=0
SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=addae30e588a0c7a05baea53d553af0f
diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
deleted file mode 100644
index 4c4a73bc66e1..000000000000
--- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup
-DEPEND=>=virtual/jdk-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=A DNA sequencing data management framework
-EAPI=4
-HOMEPAGE=http://campagnelab.org/software/goby/
-IUSE=+cpp elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.7.3 ) >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
-_md5_=d8bbf59f45f0b32b55de88f3c5233883
diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
deleted file mode 100644
index e9efc11162f4..000000000000
--- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup
-DEPEND=>=virtual/jdk-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=A DNA sequencing data management framework
-EAPI=4
-HOMEPAGE=http://campagnelab.org/software/goby/
-IUSE=+cpp elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.8.1 ) >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
-_md5_=d8bbf59f45f0b32b55de88f3c5233883
diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3
index 1828256b7584..ac5f9e90771b 100644
--- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3
+++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=62b1fc794a90a87e0f80ab795108ee3c
diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1
index a2dcfc1615aa..ea902300080b 100644
--- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1
+++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=2599766d541e65f4acfb94c4fa4e974e
diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1
index 12ed0e16351c..107e382fa5ef 100644
--- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1
+++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12
SLOT=0
SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip https://dev.gentoo.org/~mgorny/dist/goby-cpp-2.0.1-files.tar.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8282c100b202c470aedc98e37f6151ff
diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1
index f8274f20ecca..19e141820a89 100644
--- a/metadata/md5-cache/sci-biology/iedera-1.05-r1
+++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=ce77e1e27bd52fed2fd2af52744d6288
diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2
index e10521d531e0..7a6a7d90b31a 100644
--- a/metadata/md5-cache/sci-biology/kalign-2.03-r2
+++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=175d26382226c7bed2b44be485b01d01
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1
index b14eb3f8aec4..c3e4867f6155 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.43.1
+++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1
@@ -8,5 +8,5 @@ LICENSE=BSD
RDEPEND=sci-libs/hdf5:= sys-libs/zlib:=
SLOT=0
SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=b5fc562bf49e70db44b86bc5702ae9f2
diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999
index c5dfd2de870c..54ae2076cc54 100644
--- a/metadata/md5-cache/sci-biology/kallisto-9999
+++ b/metadata/md5-cache/sci-biology/kallisto-9999
@@ -7,5 +7,5 @@ LICENSE=BSD
PROPERTIES=live
RDEPEND=sci-libs/hdf5:= sys-libs/zlib:=
SLOT=0
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca git-r3 562b380fc59ae6a8622171d0acb777d1 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca git-r3 562b380fc59ae6a8622171d0acb777d1 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=b5fc562bf49e70db44b86bc5702ae9f2
diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3
index ba82f79e534b..31271b5606b0 100644
--- a/metadata/md5-cache/sci-biology/lagan-2.0-r3
+++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3
@@ -7,5 +7,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=c9dbddd6a22f2e20ff25d0aa1e6f4280
diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230
index 2b3d204435c1..5ad2b330f7fa 100644
--- a/metadata/md5-cache/sci-biology/last-230
+++ b/metadata/md5-cache/sci-biology/last-230
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-3
SLOT=0
SRC_URI=http://last.cbrc.jp/archive/last-230.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5da658e6779591b0d1b9ad3413a0e7b2
diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1
index f58f7cf15632..850e6faf1c24 100644
--- a/metadata/md5-cache/sci-biology/last-299-r1
+++ b/metadata/md5-cache/sci-biology/last-299-r1
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://last.cbrc.jp/last-299.zip
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=ec5206661373a6ef6ad77450dfbdb915
diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
index f9afdb8a880b..97ef573fac1d 100644
--- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
+++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=AGPL-3
SLOT=0/0
SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=867c9b9e4eee26ad2a76ff6ff0594f52
diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050
index e0613f73f3e2..a6274d9d7a25 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.050
+++ b/metadata/md5-cache/sci-biology/mafft-7.050
@@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=3195e77c5c792018208b65f5dbeab567
diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215
index 8f51ad5ba4be..69a79a0fab00 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.215
+++ b/metadata/md5-cache/sci-biology/mafft-7.215
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=7b8b136195c000efff0407f671d57f19
diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305
index bae16b689630..c9e8671a5f3c 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.305
+++ b/metadata/md5-cache/sci-biology/mafft-7.305
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
LICENSE=BSD
SLOT=0
SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=920a37021a0b392bb7315b63cf3de39d
diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2
index 306116663f70..8baac225485a 100644
--- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2
+++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=39ffb0025210075a8d7d7f6f81f8da56
diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
index ccf7ca96cf52..8f1fe9bef07b 100644
--- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
+++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-3
RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq
SLOT=0
SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=dee50558d10e75ff9e96f4c3f177c55f
diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312
index d7ce9f36c910..d837fbf9c3b3 100644
--- a/metadata/md5-cache/sci-biology/mcl-08.312
+++ b/metadata/md5-cache/sci-biology/mcl-08.312
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=24cf3aad7375304f2721048d2f76b5f1
diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135
index 0d61e0953bc2..c79d6f82a580 100644
--- a/metadata/md5-cache/sci-biology/mcl-12.135
+++ b/metadata/md5-cache/sci-biology/mcl-12.135
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=24cf3aad7375304f2721048d2f76b5f1
diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137
index 93d78f42bb65..a8e79795a7e8 100644
--- a/metadata/md5-cache/sci-biology/mcl-14.137
+++ b/metadata/md5-cache/sci-biology/mcl-14.137
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=3429c68609b6c70e047d577379f68f97
diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2
index 406572d660f7..7d19c31d8b11 100644
--- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2
+++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a versionator 2352c3fc97241f6a02042773c8287748
_md5_=a4080439675628436c06de8db9f59c6e
diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2
index 609e7c4c7824..ccf5e42539e8 100644
--- a/metadata/md5-cache/sci-biology/mira-4.0.2
+++ b/metadata/md5-cache/sci-biology/mira-4.0.2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-libs/boost[threads] dev-util/google-perftools
SLOT=0
SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=4e9fc8a550640febbc0b71544c16618c
diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30
index bb1702b56f39..0c36cb492159 100644
--- a/metadata/md5-cache/sci-biology/mosaik-2.2.30
+++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd
_md5_=630686b35f8a549c580c5fd0e2cb02fc
diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
index 663c2a669dce..5b6e9e4f81e6 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
+++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran
SLOT=0
SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca fortran-2 f75a2d9321053acf424991e805f32ede ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca fortran-2 f75a2d9321053acf424991e805f32ede ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=17f8b3c73710bbb746fc4cbfcf78b85d
diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1
index 66eaa144437d..525e21c98f42 100644
--- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1
+++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 )
SLOT=0
SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=a082c9b1f1b5f9fa9b85e23eb7009a6d
diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
index 4d265d2b23c4..abbdb0bdfd5f 100644
--- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
+++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0= )
SLOT=0
SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=a944448f568e57bb9f221cd1f437ab09
diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23
index b9b877535bfe..bf66b94a7830 100644
--- a/metadata/md5-cache/sci-biology/mummer-3.23
+++ b/metadata/md5-cache/sci-biology/mummer-3.23
@@ -8,5 +8,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=c256f298b416306c1be7005e7877f7b9
diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31
index f99b59787046..e83056052f91 100644
--- a/metadata/md5-cache/sci-biology/muscle-3.8.31
+++ b/metadata/md5-cache/sci-biology/muscle-3.8.31
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=!sci-libs/libmuscle
SLOT=0
SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=500ff424aff8c56744362bc87a3ff285
diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
index 1f17c0c61785..4627b82ee540 100644
--- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
+++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt )
SLOT=0
SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=550e2f5b19e400b1ca82a7ba4f7bd44a
diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2
index b3405bf9919c..9db3474f8b45 100644
--- a/metadata/md5-cache/sci-biology/njplot-2.3-r2
+++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2
@@ -8,5 +8,5 @@ LICENSE=public-domain
RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=c70b49c7f5e1a92f5169df372f9638c6
diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1
index 5f67a23f5575..28fa8d4006d4 100644
--- a/metadata/md5-cache/sci-biology/pals-1.0-r1
+++ b/metadata/md5-cache/sci-biology/pals-1.0-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=public-domain
SLOT=0
SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=b0df20d47905df6a290c5fe2f79fd48b
diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1
index 9b3901f048f9..8b93ecd2039b 100644
--- a/metadata/md5-cache/sci-biology/paml-4.4c-r1
+++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=free-noncomm
SLOT=0
SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz
-_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=estack 43ddf5aaffa7a8d0482df54d25a66a1f multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a versionator 2352c3fc97241f6a02042773c8287748
_md5_=c46d709378282d4ccbb567aaa00ee01a
diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2
index e887623bc8a3..96de4e067e27 100644
--- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2
+++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2
@@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk
RESTRICT=fetch
SLOT=0
SRC_URI=phrap-1.080812-distrib.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=8f5aa73e6a49ffbd5804d4ddea05b2b8
diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1
index cfaaa90f070b..5c66b1128f09 100644
--- a/metadata/md5-cache/sci-biology/phred-071220-r1
+++ b/metadata/md5-cache/sci-biology/phred-071220-r1
@@ -7,5 +7,5 @@ LICENSE=phrap
RESTRICT=fetch
SLOT=0
SRC_URI=phred-dist-071220.b-acd.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=6cb07f602eee34da61fd893818f30936
diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1
index 930d1d9efdc1..9f5ea32df425 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.69-r1
+++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1
@@ -8,5 +8,5 @@ LICENSE=freedist
RDEPEND=x11-libs/libXaw
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=d0432dd24ac4208e4dfcf91bea60d018
diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1
index 2f853576660c..f306bcc84b38 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.696-r1
+++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1
@@ -8,5 +8,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=8b5da2d13bfc622e3156ee011204f899
diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r2 b/metadata/md5-cache/sci-biology/phylip-3.696-r2
index af61acc99c32..1cd20dd94b77 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.696-r2
+++ b/metadata/md5-cache/sci-biology/phylip-3.696-r2
@@ -8,5 +8,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw !!dev-lang/elixir
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=69a57b901c6c154707c8c45f5ba39189
diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
index 4971095206aa..4b5e0b6f5409 100644
--- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
+++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3
@@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7
diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103
index b17825629ce7..12c31b3288b5 100644
--- a/metadata/md5-cache/sci-biology/picard-1.103
+++ b/metadata/md5-cache/sci-biology/picard-1.103
@@ -9,5 +9,5 @@ LICENSE=Apache-2.0
RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons-jexl:2 dev-java/ant-core:0 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
SLOT=0
SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d eapi7-ver 756b3f27d8e46131d5cf3c51bd876446 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 java-ant-2 6505e8068920164179b7e3926220c89f java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 dd352559d0e143500ec878acc74da909 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=09627e6bb74ee9997324bde01a56bcbd
diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1
index 7c576028e506..ce00faa60bd0 100644
--- a/metadata/md5-cache/sci-biology/piler-1.0-r1
+++ b/metadata/md5-cache/sci-biology/piler-1.0-r1
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals
SLOT=0
SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=7b5a6d618aac08240cf165a04509c319
diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1
index c485f3c9f733..1ff9b9719d0d 100644
--- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1
+++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=public-domain
SLOT=0
SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=d9f7901d3776c424cfb93782cc6ddafa
diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1
index b1d656a6f05b..9bc247f9763e 100644
--- a/metadata/md5-cache/sci-biology/plink-1.07-r1
+++ b/metadata/md5-cache/sci-biology/plink-1.07-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib lapack? ( virtual/lapack )
SLOT=0
SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b659cc5ab8af123ceaf15f1349214345
diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514
index 8aa788de9814..ed772a0710d9 100644
--- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514
+++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack
SLOT=0
SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=570249dc23feeff7b47b3e81df358196
diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1
index 084cd0669187..ba1842f56599 100644
--- a/metadata/md5-cache/sci-biology/poa-2-r1
+++ b/metadata/md5-cache/sci-biology/poa-2-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8c6d961d6aa6f18d30b6fb7dd995115f
diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603
index 265bc46274e5..074847eab4ef 100644
--- a/metadata/md5-cache/sci-biology/prank-140603
+++ b/metadata/md5-cache/sci-biology/prank-140603
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-3
SLOT=0
SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=17023476000980284365a9c0ed04a6f0
diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7
index c8749b17e1e2..825087a7d8fb 100644
--- a/metadata/md5-cache/sci-biology/primer3-2.3.7
+++ b/metadata/md5-cache/sci-biology/primer3-2.3.7
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=e79ee4774138e651c83467c2b2cb2926
diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1
index 3c5e25d344b8..aeed8e406651 100644
--- a/metadata/md5-cache/sci-biology/probcons-1.12-r1
+++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1
@@ -7,5 +7,5 @@ LICENSE=public-domain
RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot
SLOT=0
SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=19a24bd3c543d599d5b3392e66b7022e
diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3
index ed7717b10886..e2ed8122a8de 100644
--- a/metadata/md5-cache/sci-biology/prodigal-2.6.3
+++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3
@@ -6,5 +6,5 @@ KEYWORDS=~amd64
LICENSE=GPL-3
SLOT=0
SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=9cea3bcc55e864076d7e4b542f657f96
diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39
index b3b5a544b401..09a893862cc1 100644
--- a/metadata/md5-cache/sci-biology/profphd-1.0.39
+++ b/metadata/md5-cache/sci-biology/profphd-1.0.39
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils
SLOT=0
SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=8e866cc812e134cdc7a7837e5b60aa21
diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40
index db2d3d002780..a776ee8a057b 100644
--- a/metadata/md5-cache/sci-biology/profphd-1.0.40
+++ b/metadata/md5-cache/sci-biology/profphd-1.0.40
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils
SLOT=0
SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=b641a6cfd444fa4b83d5963246948636
diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1
index c7f3a2d17f2f..3a259ede9ee3 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.2.1
+++ b/metadata/md5-cache/sci-biology/psipred-3.2.1
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=3bfa6c8db72c665ebd3da2fcad0fa1b5
diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3
index 494b45655382..e31c5b55681e 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.3
+++ b/metadata/md5-cache/sci-biology/psipred-3.3
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=26211f9b01966485ec2f6d801b58e61b
diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4
index 5844b667db95..4c40fdd1478f 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.4
+++ b/metadata/md5-cache/sci-biology/psipred-3.4
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=aa07fe12602b4a284c9d8734857542e5
diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5
index 84c9d09d38d4..432b74389a5f 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.5
+++ b/metadata/md5-cache/sci-biology/psipred-3.5
@@ -8,5 +8,5 @@ LICENSE=psipred
RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=aa07fe12602b4a284c9d8734857542e5
diff --git a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
index 12b8fffd3905..5f684663d493 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.12.0.1
+++ b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
@@ -10,5 +10,5 @@ RDEPEND==sci-libs/htslib-1.5*:= python_targets_python2_7? ( >=dev-lang/python-2.
REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
SLOT=0
SRC_URI=mirror://pypi/p/pysam/pysam-0.12.0.1.tar.gz
-_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=distutils-r1 9838160d624a44b2d56d1266a69fd473 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=9b1bc42dd99cc41b191559fb7a9fa4c6
diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
index ffd2c3c97930..27066ec53d7d 100644
--- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
+++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl sci-biology/hmmer:2
SLOT=0
SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=0fc8dac0f54d22c60da996470b3b33ee
diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6
index 65d9aedc5bc4..d44ef180472a 100644
--- a/metadata/md5-cache/sci-biology/raxml-7.2.6
+++ b/metadata/md5-cache/sci-biology/raxml-7.2.6
@@ -8,5 +8,5 @@ LICENSE=GPL-2
REQUIRED_USE=cpu_flags_x86_sse3
SLOT=0
SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f2b8e0b4e5701d9b20bcbf9151c9b868
diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08
index ea2f5a046c22..400f01cd53fc 100644
--- a/metadata/md5-cache/sci-biology/recon-1.08
+++ b/metadata/md5-cache/sci-biology/recon-1.08
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=2ddd537d912c7c88b6f0b0d203a51613
diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1
index 83b2b06a61e5..3b05795f02b6 100644
--- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1
+++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1
@@ -8,5 +8,5 @@ LICENSE=OSL-2.1
RDEPEND=dev-libs/boost
SLOT=0
SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz https://dev.gentoo.org/~mgorny/dist/rmblast-1.2-gcc47.patch.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1283e94bf3a231a794a498d2769aaa7d
diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4
index 5979bf0a671a..c22b13a09e1a 100644
--- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4
+++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=public-domain
SLOT=0
SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=788c156d45287bef4f6aa876055bde4c
diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
index e02fb7d8aba7..3e7798d7a05b 100644
--- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
+++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0.1-legacy
SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=fa48f0b2be780a9264eb9d727ec53335
diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5
index 4478d89a1c43..967358848288 100644
--- a/metadata/md5-cache/sci-biology/samtools-1.5
+++ b/metadata/md5-cache/sci-biology/samtools-1.5
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib py
REQUIRED_USE=|| ( python_targets_python2_7 )
SLOT=0
SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=8d92b4a814f62eab87bac2be22c2470c
diff --git a/metadata/md5-cache/sci-biology/samtools-1.9 b/metadata/md5-cache/sci-biology/samtools-1.9
index ff0333553c3b..88883bd3b16f 100644
--- a/metadata/md5-cache/sci-biology/samtools-1.9
+++ b/metadata/md5-cache/sci-biology/samtools-1.9
@@ -11,5 +11,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.9* sys-libs/ncurses:0= sys-libs/zlib:=
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=mirror://sourceforge/samtools/samtools-1.9.tar.bz2
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=7e8913a97cbbcf5ee0158a89a42fa92c
diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5
index 01eeb64159fb..0e1fa6e8afbb 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.3.5
+++ b/metadata/md5-cache/sci-biology/seaview-4.3.5
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=38cc02682d853c813df2b6e81cbb51c5
diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4
index 18fdf736b845..e56504f9613b 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.5.4
+++ b/metadata/md5-cache/sci-biology/seaview-4.5.4
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=38cc02682d853c813df2b6e81cbb51c5
diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6
index ff1599111b32..7187da04f00a 100644
--- a/metadata/md5-cache/sci-biology/seaview-4.6
+++ b/metadata/md5-cache/sci-biology/seaview-4.6
@@ -9,5 +9,5 @@ LICENSE=public-domain
RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw:2 || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml
SLOT=0
SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=1a6723f1ab0e67cc0d63dd54a902900f
diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
index 14afda150559..62ec90f91aa6 100644
--- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
+++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=1.4
SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=1b7be060ecec73f1e66596a71b90a92a
diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
index b91f4fd33547..8b7db2322a3f 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
+++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=aaf78a04252c5e6c2b92b04c7211b73c
diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0
index d7d2a0272e51..153f14052f2a 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.4.0
+++ b/metadata/md5-cache/sci-biology/seqan-2.4.0
@@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/s
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=ca34cde2b2fc2f8692469a016bc077f6
diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999
index 36e86e2d84c7..e237acdaf432 100644
--- a/metadata/md5-cache/sci-biology/seqan-9999
+++ b/metadata/md5-cache/sci-biology/seqan-9999
@@ -9,5 +9,5 @@ PROPERTIES=live
RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca git-r3 562b380fc59ae6a8622171d0acb777d1 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca git-r3 562b380fc59ae6a8622171d0acb777d1 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 b5f01473006ccc2cd78bc3dab20fced4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=954c2a9b05e60f6a61eb27c1cc720117
diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1
index 053e2b63c52d..d13f9dd5fc1a 100644
--- a/metadata/md5-cache/sci-biology/shrimp-2.0.1
+++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1
@@ -9,5 +9,5 @@ LICENSE=shrimp
RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs
SLOT=0
SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=33caa30e4cdcb3e86f4b1be8c6c30c46
diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3
index 7ff8023507bf..f1ad62f89dc2 100644
--- a/metadata/md5-cache/sci-biology/shrimp-2.2.3
+++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3
@@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_targets_python2_7? ( >=dev-lang/python-
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=98a7a2b9765ad5e245b1b7b9be67060b
diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20
index 78f18e56508d..5f9206446347 100644
--- a/metadata/md5-cache/sci-biology/sibsim4-0.20
+++ b/metadata/md5-cache/sci-biology/sibsim4-0.20
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=84a29c8972011ec4b86f3c8235a7b5d2
diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2
index bd676a73aef1..ade223d3e79e 100644
--- a/metadata/md5-cache/sci-biology/sim4-20030921-r2
+++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2
@@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~ppc ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=mirror://gentoo/sim4.tar.gz -> sim4-20030921.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=41856fb45004e909c7899768a28a740e
diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1
index 07070986e5f8..9bfd43ab5587 100644
--- a/metadata/md5-cache/sci-biology/stride-20011129-r1
+++ b/metadata/md5-cache/sci-biology/stride-20011129-r1
@@ -7,5 +7,5 @@ LICENSE=STRIDE
RESTRICT=mirror bindist
SLOT=0
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=897f9fd1d73b5a7779f29a7ca161cb75
diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
index eb1d947c3a03..8b4a31d272fb 100644
--- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
+++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2
@@ -7,5 +7,5 @@ LICENSE=GPL-2
RDEPEND=sci-biology/clustalw sci-chemistry/tm-align
SLOT=0
SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=5c54b109c5b8bef93adbc5f99ddd7114
diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4
index 09179b885a32..7db690175e86 100644
--- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4
+++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4
@@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/
REQUIRED_USE=python_targets_python2_7
SLOT=0
SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=efee8069c83c578acac8e57b429ad985
diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2
index 468c590529d3..1dfa9d0cfc6a 100644
--- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2
+++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2
@@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi )
RESTRICT=test
SLOT=0
SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=6f933fde60eb23f0e50fbe5e137bbc7e
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index 1f1c6c68eacd..193ad8d80fe3 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.0[X]
SLOT=0
SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets e1e6e1eb5b3d911b3abd712f611e2312
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets e1e6e1eb5b3d911b3abd712f611e2312
_md5_=ce129f3e61a849cfd3654e5a9fa4b17a
diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31
index 9cff44f7923f..84509cf32524 100644
--- a/metadata/md5-cache/sci-biology/trnascan-se-1.31
+++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31
@@ -6,5 +6,5 @@ KEYWORDS=amd64 x86
LICENSE=GPL-2
SLOT=0
SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz
-_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=multilib 1d91b03d42ab6308b5f4f6b598ed110e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=3f4bcdf31fe276f90a95e2f4b311deae
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40
index 9d985fe8748c..88b2b40f780a 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40
@@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
LICENSE=public-domain
SLOT=0
SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils 91d6ef31dc426240577497cacbf2508c desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=6adcbb8c658bdc3c40f797c61f5c58b0
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
index 1c3db3c6fdb8..8e66c30b501a 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
@@ -10,5 +10,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows
REQUIRED_USE=server? ( mysql )
SLOT=0
SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12
_md5_=ecc35fd7ec196a9e5cce4c0c51af618f
diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1
index 22edde81c20a..78742368ded3 100644
--- a/metadata/md5-cache/sci-biology/unafold-3.8-r1
+++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=unafold
SLOT=0
SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=f6e357557efc2f86eab0adadd32142ce
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14
index 481e0471b94a..599142252ca2 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.14
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14
@@ -9,5 +9,5 @@ LICENSE=LGPL-3
RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
SLOT=0
SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=82adffd84f2a93745e683b498b79fbe8
diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1
index e07537c9f6b3..71e335e21ce1 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1
+++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=sys-libs/zlib
SLOT=0
SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=81d9bd82f6f3df3f4b73fa7d65b5d95e
diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10
index e0d89af39e91..d71d0f8395e9 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.2.10
+++ b/metadata/md5-cache/sci-biology/velvet-1.2.10
@@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 7ba73aee7fe4462b3a745e3645ab92ca ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=420632435bf1efe77241192fff993a20
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
index 225f54f6255c..d7fe17e74347 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 9838160d624a44b2d56d1266a69fd473 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 9838160d624a44b2d56d1266a69fd473 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=1e58c830b49ced05ae9960fcc2dead13
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
index 5eaec4676cd1..8b360ff566ad 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 9838160d624a44b2d56d1266a69fd473 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 9838160d624a44b2d56d1266a69fd473 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild 40fe59465edacd730c644ec2bc197809 multilib 1d91b03d42ab6308b5f4f6b598ed110e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 20c90ae7e826995a597683580cdfcdcb preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 08e17157a6807add7db1f8d01e7e391f toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a unpacker 3cd8bad0d31e525cd26be1bfa4e61631 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba
_md5_=b2a6486af275e75c6365ab7eeba1e0bd
diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
index 15ec6f2acfd2..b1a1c49b0a50 100644
--- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
+++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=net-libs/libtirpc x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl
SLOT=0
SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=cb4182fc2947f2a3efa19db296a6a76f
diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
index 776730baaa97..c99324ccfe88 100644
--- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
+++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha
@@ -9,5 +9,5 @@ LICENSE=BSD
RDEPEND=~sci-biology/hmmer-2.3.2
SLOT=0
SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 1d91b03d42ab6308b5f4f6b598ed110e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
_md5_=5089373e8fa38f080134e22ddf59264c
diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2
index f0a85cd3e0b9..92ddaca8bb90 100644
--- a/metadata/md5-cache/sci-biology/yass-1.14-r2
+++ b/metadata/md5-cache/sci-biology/yass-1.14-r2
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dmalloc? ( dev-libs/dmalloc )
SLOT=0
SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz
-_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs a3a237ef6c0c58546bf23b2c382f9e56
+_eclasses_=autotools 1bf086cdd7356f5c9a4acd9727bd2065 libtool f143db5a74ccd9ca28c1234deffede96 multilib 1d91b03d42ab6308b5f4f6b598ed110e toolchain-funcs 2f8b8f320bee13b71a8a54cc6d09e08a
_md5_=3a4ba9b4e7b8efec51cfc79d261fefd3