gentoo auto-resync : 27:12:2022 - 02:09:02

3 files changed, 30 insertions, 0 deletions

diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index a5a56e04dea5..510d1a7d555a 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.16 b/metadata/md5-cache/sci-biology/bcftools-1.16
new file mode 100644
index 000000000000..d17324f6f020
--- /dev/null
+++ b/metadata/md5-cache/sci-biology/bcftools-1.16
@@ -0,0 +1,16 @@
+BDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.9:3.10 ) python_single_target_python3_11? ( >=dev-lang/python-3.11.1:3.11 )
+DEFINED_PHASES=configure prepare setup
+DEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) python_single_target_python3_11? ( dev-python/matplotlib[python_targets_python3_11(-)] ) =sci-libs/htslib-1.16*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.9:3.10 ) python_single_target_python3_11? ( >=dev-lang/python-3.11.1:3.11 )
+DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files
+EAPI=8
+HOMEPAGE=http://www.htslib.org
+INHERIT=python-single-r1
+IUSE=python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 python_single_target_python3_11
+KEYWORDS=~amd64 ~x86
+LICENSE=MIT
+RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) python_single_target_python3_11? ( dev-python/matplotlib[python_targets_python3_11(-)] ) =sci-libs/htslib-1.16*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.9:3.10 ) python_single_target_python3_11? ( >=dev-lang/python-3.11.1:3.11 )
+REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 python_single_target_python3_11 )
+SLOT=0
+SRC_URI=https://github.com/samtools/bcftools/releases/download/1.16/bcftools-1.16.tar.bz2
+_eclasses_=multilib	5ca4e49abed8e3a2f7b56920eadee157	multiprocessing	b4e253ab22cef7b1085e9b67c7a3b730	python-single-r1	a5747fe6dc0651d95cb78eddd5e160a8	python-utils-r1	6a75203e8a499f0fb42971452ce15388	toolchain-funcs	37a4612ce5522df5a100359a8dbc8491
+_md5_=6db47fe6dd9b7f6dae282c829dd08dbd
diff --git a/metadata/md5-cache/sci-biology/samtools-1.16.1 b/metadata/md5-cache/sci-biology/samtools-1.16.1
new file mode 100644
index 000000000000..83e341790177
--- /dev/null
+++ b/metadata/md5-cache/sci-biology/samtools-1.16.1
@@ -0,0 +1,14 @@
+BDEPEND=virtual/pkgconfig
+DEFINED_PHASES=compile configure install prepare
+DEPEND=dev-lang/perl =sci-libs/htslib-1.16*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib
+DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats
+EAPI=8
+HOMEPAGE=http://www.htslib.org/
+INHERIT=toolchain-funcs
+KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
+LICENSE=MIT
+RDEPEND=dev-lang/perl =sci-libs/htslib-1.16*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib
+SLOT=0
+SRC_URI=https://github.com/samtools/samtools/releases/download/1.16.1/samtools-1.16.1.tar.bz2
+_eclasses_=multilib	5ca4e49abed8e3a2f7b56920eadee157	toolchain-funcs	37a4612ce5522df5a100359a8dbc8491
+_md5_=b8e35bdd6557538de4b0e9d3b6c9295c