From 65531d9c170398a321c546ea67946a932842217b Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Tue, 27 Dec 2022 02:09:02 +0000 Subject: gentoo auto-resync : 27:12:2022 - 02:09:02 --- metadata/md5-cache/sci-biology/Manifest.gz | Bin 21563 -> 21890 bytes metadata/md5-cache/sci-biology/bcftools-1.16 | 16 ++++++++++++++++ metadata/md5-cache/sci-biology/samtools-1.16.1 | 14 ++++++++++++++ 3 files changed, 30 insertions(+) create mode 100644 metadata/md5-cache/sci-biology/bcftools-1.16 create mode 100644 metadata/md5-cache/sci-biology/samtools-1.16.1 (limited to 'metadata/md5-cache/sci-biology') diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz index a5a56e04dea5..510d1a7d555a 100644 Binary files a/metadata/md5-cache/sci-biology/Manifest.gz and b/metadata/md5-cache/sci-biology/Manifest.gz differ diff --git a/metadata/md5-cache/sci-biology/bcftools-1.16 b/metadata/md5-cache/sci-biology/bcftools-1.16 new file mode 100644 index 000000000000..d17324f6f020 --- /dev/null +++ b/metadata/md5-cache/sci-biology/bcftools-1.16 @@ -0,0 +1,16 @@ +BDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.9:3.10 ) python_single_target_python3_11? ( >=dev-lang/python-3.11.1:3.11 ) +DEFINED_PHASES=configure prepare setup +DEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) python_single_target_python3_11? ( dev-python/matplotlib[python_targets_python3_11(-)] ) =sci-libs/htslib-1.16*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.9:3.10 ) python_single_target_python3_11? ( >=dev-lang/python-3.11.1:3.11 ) +DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files +EAPI=8 +HOMEPAGE=http://www.htslib.org +INHERIT=python-single-r1 +IUSE=python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 python_single_target_python3_11 +KEYWORDS=~amd64 ~x86 +LICENSE=MIT +RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) python_single_target_python3_11? ( dev-python/matplotlib[python_targets_python3_11(-)] ) =sci-libs/htslib-1.16*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.16:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.9:3.10 ) python_single_target_python3_11? ( >=dev-lang/python-3.11.1:3.11 ) +REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 python_single_target_python3_11 ) +SLOT=0 +SRC_URI=https://github.com/samtools/bcftools/releases/download/1.16/bcftools-1.16.tar.bz2 +_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 6a75203e8a499f0fb42971452ce15388 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 +_md5_=6db47fe6dd9b7f6dae282c829dd08dbd diff --git a/metadata/md5-cache/sci-biology/samtools-1.16.1 b/metadata/md5-cache/sci-biology/samtools-1.16.1 new file mode 100644 index 000000000000..83e341790177 --- /dev/null +++ b/metadata/md5-cache/sci-biology/samtools-1.16.1 @@ -0,0 +1,14 @@ +BDEPEND=virtual/pkgconfig +DEFINED_PHASES=compile configure install prepare +DEPEND=dev-lang/perl =sci-libs/htslib-1.16*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib +DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats +EAPI=8 +HOMEPAGE=http://www.htslib.org/ +INHERIT=toolchain-funcs +KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos +LICENSE=MIT +RDEPEND=dev-lang/perl =sci-libs/htslib-1.16*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib +SLOT=0 +SRC_URI=https://github.com/samtools/samtools/releases/download/1.16.1/samtools-1.16.1.tar.bz2 +_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 37a4612ce5522df5a100359a8dbc8491 +_md5_=b8e35bdd6557538de4b0e9d3b6c9295c -- cgit v1.2.3