reinit the tree, so we can have metadata

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diff --git a/licenses/PDB b/licenses/PDB
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+               PDB SOFTWARE LICENSE AGREEMENT
+
+BY CLICKING THE ACCEPTANCE BUTTON OR INSTALLING OR USING
+THIS "SOFTWARE, THE INDIVIDUAL OR ENTITY LICENSING THE
+SOFTWARE ("LICENSEE") IS CONSENTING TO BE BOUND BY AND IS
+BECOMING A PARTY TO THIS AGREEMENT.  IF LICENSEE DOES NOT
+AGREE TO ALL OF THE TERMS OF THIS AGREEMENT
+THE LICENSEE MUST NOT INSTALL OR USE THE SOFTWARE.
+
+1. LICENSE AGREEMENT
+
+This is a license between you ("Licensee") and the Protein Data Bank (PDB)
+at Rutgers, The State University of New Jersey (hereafter referred to
+as "RUTGERS").   The software is owned by RUTGERS and protected by
+copyright laws, and some elements are protected by laws governing
+trademarks, trade dress and trade secrets, and may be protected by
+patent laws.
+
+2. LICENSE GRANT
+
+RUTGERS grants you, and you hereby accept, non-exclusive, royalty-free
+perpetual license to install, use, modify, prepare derivative works,
+incorporate into other computer software, and distribute in binary
+and source code format, or any derivative work thereof, together with
+any associated media, printed materials, and on-line or electronic
+documentation (if any) provided by RUTGERS (collectively, the "SOFTWARE"),
+subject to the following terms and conditions: (i) any distribution
+of the SOFTWARE shall bind the receiver to the terms and conditions
+of this Agreement; (ii) any distribution of the SOFTWARE in modified
+form shall clearly state that the SOFTWARE has been modified from
+the version originally obtained from RUTGERS.
+
+2. COPYRIGHT; RETENTION OF RIGHTS.
+
+The above license grant is conditioned on the following: (i) you must
+reproduce all copyright notices and other proprietary notices on any
+copies of the SOFTWARE and you must not remove such notices; (ii) in
+the event you compile the SOFTWARE, you will include the copyright
+notice with the binary in such a manner as to allow it to be easily
+viewable; (iii) if you incorporate the SOFTWARE into other code, you
+must provide notice that the code contains the SOFTWARE and include
+a copy of the copyright notices and other proprietary notices.  All
+copies of the SOFTWARE shall be subject to the terms of this Agreement.
+
+3. NO MAINTENANCE OR SUPPORT; TREATMENT OF ENHANCEMENTS
+
+RUTGERS is under no obligation whatsoever to: (i) provide maintenance
+or support for the SOFTWARE; or (ii) to notify you of bug fixes, patches,
+or upgrades to the features, functionality or performance of the
+SOFTWARE ("Enhancements") (if any), whether developed by RUTGERS
+or third parties.  If, in its sole discretion, RUTGERS makes an
+Enhancement available to you and RUTGERS does not separately enter
+into a written license agreement with you relating to such bug fix,
+patch or upgrade, then it shall be deemed incorporated into the SOFTWARE
+and subject to this Agreement. You are under no obligation whatsoever
+to provide any Enhancements to RUTGERS or the public that you may
+develop over time; however, if you choose to provide your Enhancements
+to RUTGERS, or if you choose to otherwise publish or distribute your
+Enhancements, in source code form without contemporaneously requiring
+end users or RUTGERS to enter into a separate written license agreement
+for such Enhancements, then you hereby grant RUTGERS a non-exclusive,
+royalty-free perpetual license to install, use, modify, prepare
+derivative works, incorporate into the SOFTWARE or other computer
+software, distribute, and sublicense your Enhancements or derivative
+works thereof, in binary and source code form.
+
+4. FEES.  There is no license fee for the SOFTWARE.  If Licensee
+wishes to receive the SOFTWARE on media, there may be a small charge
+for the media and for shipping and handling.  Licensee is
+responsible for any and all taxes.
+
+5. TERMINATION.  Without prejudice to any other rights, Licensor
+may terminate this Agreement if Licensee breaches any of its terms
+and conditions.  Upon termination, Licensee shall destroy all
+copies of the SOFTWARE.
+
+6. PROPRIETARY RIGHTS.  Title, ownership rights, and intellectual
+property rights in the Product shall remain with RUTGERS.  Licensee
+acknowledges such ownership and intellectual property rights and will
+not take any action to jeopardize, limit or interfere in any manner
+with RUTGERS' ownership of or rights with respect to the SOFTWARE.
+The SOFTWARE is protected by copyright and other intellectual
+property laws and by international treaties.  Title and related
+rights in the content accessed through the SOFTWARE is the property
+of the applicable content owner and is protected by applicable law.
+The license granted under this Agreement gives Licensee no rights to such
+content.
+
+7. DISCLAIMER OF WARRANTY.  THE SOFTWARE IS PROVIDED FREE OF
+CHARGE, AND, THEREFORE, ON AN "AS IS" BASIS, WITHOUT WARRANTY OF
+ANY KIND, INCLUDING WITHOUT LIMITATION THE WARRANTIES THAT IT
+IS FREE OF DEFECTS, MERCHANTABLE, FIT FOR A PARTICULAR PURPOSE
+OR NON-INFRINGING.  THE ENTIRE RISK AS TO THE QUALITY AND
+PERFORMANCE OF THE SOFTWARE IS BORNE BY LICENSEE.  SHOULD THE
+SOFTWARE PROVE DEFECTIVE IN ANY RESPECT, THE LICENSEE AND NOT
+LICENSOR ASSUMES THE ENTIRE COST OF ANY SERVICE AND REPAIR.
+THIS DISCLAIMER OF WARRANTY CONSTITUTES AN ESSENTIAL PART OF
+THIS AGREEMENT.  NO USE OF THE PRODUCT IS AUTHORIZED HEREUNDER
+EXCEPT UNDER THIS DISCLAIMER.
+
+8. LIMITATION OF LIABILITY.  TO THE MAXIMUM EXTENT PERMITTED BY
+APPLICABLE LAW,  IN NO EVENT WILL LICENSOR BE LIABLE FOR ANY
+INDIRECT, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING
+OUT OF THE USE OF OR INABILITY TO USE THE SOFTWARE, INCLUDING,
+WITHOUT LIMITATION, DAMAGES FOR LOSS OF GOODWILL, WORK
+STOPPAGE, COMPUTER FAILURE OR MALFUNCTION, OR ANY AND ALL
+OTHER COMMERCIAL DAMAGES OR LOSSES, EVEN IF ADVISED OF THE
+POSSIBILITY THEREOF.