diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2021-03-03 10:28:17 +0000 |
---|---|---|
committer | V3n3RiX <venerix@redcorelinux.org> | 2021-03-03 10:28:17 +0000 |
commit | d99093fb4bb5652015c06274d64083daa2439e4f (patch) | |
tree | cf61513204d97974179580065e85df5c8009087c /dev-python/scipy | |
parent | 463397cf1e064185110fe57c568d73f99a06f5d1 (diff) |
gentoo resync : 03.03.2021
Diffstat (limited to 'dev-python/scipy')
-rw-r--r-- | dev-python/scipy/Manifest | 6 | ||||
-rw-r--r-- | dev-python/scipy/scipy-1.6.0.ebuild | 2 | ||||
-rw-r--r-- | dev-python/scipy/scipy-1.6.1.ebuild | 155 |
3 files changed, 161 insertions, 2 deletions
diff --git a/dev-python/scipy/Manifest b/dev-python/scipy/Manifest index cee98e41047a..d6db9343fdcb 100644 --- a/dev-python/scipy/Manifest +++ b/dev-python/scipy/Manifest @@ -16,10 +16,14 @@ DIST scipy-1.5.4.tar.gz 25237512 BLAKE2B 719cfecd6794b037dc636793ba38a3b39f5fd1a DIST scipy-1.6.0-html.zip 23941941 BLAKE2B 3222e9b1e1aeebfd1ab0f8d179d25c25d6ab26a54c3d6c7f12d5cb24dd59af216685cb1db1d11980ca32c8e14595a1753b69438d8c7504f7c4fc1b386e1c944d SHA512 42cd5595e1f260bcd14d5ce159d9acd0eaefbcb1401270b90efe48b0e743681361dba5ee410e5932533bca03c19daaacb6042ef8edea9b2cccd5dae21a612072 DIST scipy-1.6.0-ref.pdf 34332184 BLAKE2B 948a03372797915e47d5e8ce44a32dcacb3448a20e06c5233d3362f0f04f228e8f7505aa918dbbd9a50ad64adb7a17181acab6a726ab251b8e8acf245a1550d6 SHA512 fe4c316f91cffb10d14207882ceb7a1d3711b03ad74857d771d0ec244caad60f878902f7279f6688c947fd415762abbb5a7082c810dd85c73385e8f58fbc056c DIST scipy-1.6.0.tar.gz 27275413 BLAKE2B f65fca81a21a3077ead119123fc3bb2ed96aaacfee6f291473ef6780c291f3e9fee88d86501d4cb966f1d601fb7f0656956134f0437eb8fefb8030e762c363a5 SHA512 995ffaf56b713cdd4bdb98d8525b892e9ad84a511878b43213cb71a67f34d87c111da36cf1e0b044c75c0d5af64bfde4ad0f3e9c5e71cae2dbf053251f37064e +DIST scipy-1.6.1-html.zip 23946591 BLAKE2B d3464c342b1d4f43e17e214c7557737913bf4131f88b9d569cff106c75dc7ebf0d065283792fddc189e2a3ddc322f1b2b4f38c6d313569f28395e79680060b58 SHA512 73561f9daa303c6e967f9b11952c6239dea7ff1a2fa02434354ac78fcffe7a552aa0f1043a17cb5c35a442def499eff199856cca8efa1415449cbf54f0d4913b +DIST scipy-1.6.1-ref.pdf 34594740 BLAKE2B 905ddcd7a3d462b09ded688f0818204d7684fa18058d0dac480d0a000e9ea0b7ebcdd33c01adae17234dcdf630d4aef9078174127af46f1db55d5c14b3245346 SHA512 355f4681439c1720f45dca6badfe72d77edfca0962fd9b42df34f1cd8fff7121fa6e7f60570bb638abd3ba9693930fa46b25af862d8fc1568b508c6fdd785479 +DIST scipy-1.6.1.tar.gz 27346828 BLAKE2B 147d7b3f796023fe557f07b46eefa1b23631106556ff56bb0ab5640d7dccfa86fecc2031ba0571eee2560a9bf86705a5ef32527852650e6d0629a722574bf135 SHA512 778a7bca15bb880a3fd1c3d46ef753920335eca95fe5f2b8512883a2aec1bb8e9d8a8fdbf4fee90e823e31980408a51451cc53d4f10c632cd72faf2856c868c8 EBUILD scipy-1.1.0.ebuild 4097 BLAKE2B 1e5c11336c35bd1a97e0ec15d8e4758a890f830bf4e529421da5d6f60962b318f4b2e4088ea3dabbac424ceb55beaeb78be1d0ffbb4e57c617a6264d7422ccef SHA512 91a4f1644fa44b6e438b7910bf9960a6729ac8c2a96566998edaf9b30d9bd0d52a224d53e2ea9e5eb086cb5f857e343aec07e56ac1ce6b6535abfe1ef30840e7 EBUILD scipy-1.4.1.ebuild 4139 BLAKE2B 1a2f403c6ffc0339116db7c17dcb3965f120ae894d99eea94123573e72db8c6ee2c09a63dd2afd85eb2565fd4649ad8e12a7b211e59c6e7d21fc543031fda350 SHA512 8d98dac760d264e5d08eb2a64d54a54100f20b6a746275f8bc3337c56ce719f1f16ff9aeaca155f733e3eb7f0a72dee92d10ac7d3ee701b9624e00e59080ddad EBUILD scipy-1.5.2.ebuild 4381 BLAKE2B 8f625610784e22218a3156433bdb41d7ae70d872d7c3675632a5542f4cce0528e941bb9cd94264ddefeafd6eea315cfa1ea86d4675328b78c09f163129cc5927 SHA512 e7611bdd1f91af2d2adf7f55db99550368ac0ddab1aac83a018dd0e38eb257c07af5908c96dbafd82376a36a0eaeaff8448bf94f185fb14a1eaa31ba612feb30 EBUILD scipy-1.5.3.ebuild 4382 BLAKE2B 7a33344b2c611098a2f13c970ef554643dcf19707754b20be2473b8dbfe8421e0675e891eb004cf0b34161b8e2220bf051972bd864c7cc2147e12756fd908a0f SHA512 2ca33651401e2d039bc8372d1a83198013e4cc673762d98b852033eb3ff0d077eceae8bbc87e35df0a5f34df3f6dd8e7ea6b535d3c87cb7a01787e89da858ee8 EBUILD scipy-1.5.4.ebuild 4381 BLAKE2B 8f625610784e22218a3156433bdb41d7ae70d872d7c3675632a5542f4cce0528e941bb9cd94264ddefeafd6eea315cfa1ea86d4675328b78c09f163129cc5927 SHA512 e7611bdd1f91af2d2adf7f55db99550368ac0ddab1aac83a018dd0e38eb257c07af5908c96dbafd82376a36a0eaeaff8448bf94f185fb14a1eaa31ba612feb30 -EBUILD scipy-1.6.0.ebuild 4211 BLAKE2B ee63ef5ce1f5bb23dc5b10e6e1a388ee1f5f987807d86732cc3d35ef17dffaedd9950d2b1ddc6dd103efced4fef06c51a2d19e0f458067fbf38a6921173c8727 SHA512 a5541ad450a04be984abf628ae90ea4cc1b6f7383c19aa35e0eb56b3e6423acaf5ea9983ee27877614e1b9296ba5db9a10d54f9b1d91f25fb222db045f7e4d2f +EBUILD scipy-1.6.0.ebuild 4209 BLAKE2B 1766143fc9b26994c4f2d33f354ef333a4fa6a1906fe4d1511fcadfcb50f34a5a61fb0da72c133c1d62b7d8cc6bfdcdc3d25950febdb2085f3302e5665eeea35 SHA512 489ef19e1eab7d76f22d494d79fcd9103b49d9b8287837f9c823cd4e4760301bfd0cdaf00ce578cd8e61cfb06b96e4746a0b95658cd03d8767d52205fae3140d +EBUILD scipy-1.6.1.ebuild 4211 BLAKE2B ee63ef5ce1f5bb23dc5b10e6e1a388ee1f5f987807d86732cc3d35ef17dffaedd9950d2b1ddc6dd103efced4fef06c51a2d19e0f458067fbf38a6921173c8727 SHA512 a5541ad450a04be984abf628ae90ea4cc1b6f7383c19aa35e0eb56b3e6423acaf5ea9983ee27877614e1b9296ba5db9a10d54f9b1d91f25fb222db045f7e4d2f MISC metadata.xml 1038 BLAKE2B a17718312d2d1ead8646e838b2704c14a9f21be8c59fbc0cd8544ab45bdb28005443be05f3a9f5671581f0f28e3cf7507131e2baad5e7b128a452d1ca3fae19e SHA512 2ee6a44a4f32d34f52eb1a0bb787907c31d22c15af597c8db8820df72cafcbba72201c5157b60dede7df4ff0ba48847e8f764c5a67a0b7efacabe1b9fa9bd74a diff --git a/dev-python/scipy/scipy-1.6.0.ebuild b/dev-python/scipy/scipy-1.6.0.ebuild index 65a1f0129c60..a1948aba7496 100644 --- a/dev-python/scipy/scipy-1.6.0.ebuild +++ b/dev-python/scipy/scipy-1.6.0.ebuild @@ -19,7 +19,7 @@ SRC_URI=" LICENSE="BSD LGPL-2" SLOT="0" -KEYWORDS="~amd64 ~arm ~arm64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos" +KEYWORDS="amd64 ~arm ~arm64 ~ppc ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos" IUSE="doc sparse test" RESTRICT="!test? ( test )" diff --git a/dev-python/scipy/scipy-1.6.1.ebuild b/dev-python/scipy/scipy-1.6.1.ebuild new file mode 100644 index 000000000000..65a1f0129c60 --- /dev/null +++ b/dev-python/scipy/scipy-1.6.1.ebuild @@ -0,0 +1,155 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +PYTHON_COMPAT=( python3_{7..9} ) +PYTHON_REQ_USE="threads(+)" + +inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs + +DESCRIPTION="Scientific algorithms library for Python" +HOMEPAGE="https://www.scipy.org/" +SRC_URI=" + mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz + doc? ( + https://docs.scipy.org/doc/${P}/${PN}-html-${PV}.zip -> ${P}-html.zip + https://docs.scipy.org/doc/${P}/${PN}-ref-${PV}.pdf -> ${P}-ref.pdf + )" + +LICENSE="BSD LGPL-2" +SLOT="0" +KEYWORDS="~amd64 ~arm ~arm64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos" +IUSE="doc sparse test" +RESTRICT="!test? ( test )" + +DEPEND=" + >=dev-python/numpy-1.16.5[lapack,${PYTHON_USEDEP}] + sci-libs/arpack:0= + virtual/cblas + virtual/lapack + sparse? ( sci-libs/umfpack:0= )" +RDEPEND="${DEPEND} + dev-python/pillow[${PYTHON_USEDEP}]" +BDEPEND=" + dev-lang/swig + >=dev-python/cython-0.29.13[${PYTHON_USEDEP}] + dev-python/pybind11[${PYTHON_USEDEP}] + virtual/pkgconfig + doc? ( app-arch/unzip ) + test? ( + dev-python/nose[${PYTHON_USEDEP}] + dev-python/pytest[${PYTHON_USEDEP}] + )" + +DISTUTILS_IN_SOURCE_BUILD=1 + +src_unpack() { + default + if use doc; then + unzip -qo "${DISTDIR}"/${P}-html.zip -d html || die + fi +} + +pc_incdir() { + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libdir() { + $(tc-getPKG_CONFIG) --libs-only-L $@ | \ + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libs() { + $(tc-getPKG_CONFIG) --libs-only-l $@ | \ + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' +} + +python_prepare_all() { + # scipy automatically detects libraries by default + export {FFTW,FFTW3,UMFPACK}=None + use sparse && unset UMFPACK + # the missing symbols are in -lpythonX.Y, but since the version can + # differ, we just introduce the same scaryness as on Linux/ELF + [[ ${CHOST} == *-darwin* ]] \ + && append-ldflags -bundle "-undefined dynamic_lookup" \ + || append-ldflags -shared + [[ -z ${FC} ]] && export FC="$(tc-getFC)" + # hack to force F77 to be FC until bug #278772 is fixed + [[ -z ${F77} ]] && export F77="$(tc-getFC)" + export F90="${FC}" + export SCIPY_FCONFIG="config_fc --noopt --noarch" + append-fflags -fPIC + + local libdir="${EPREFIX}"/usr/$(get_libdir) + cat >> site.cfg <<-EOF || die + [blas] + include_dirs = $(pc_incdir cblas) + library_dirs = $(pc_libdir cblas blas):${libdir} + blas_libs = $(pc_libs cblas blas) + [lapack] + library_dirs = $(pc_libdir lapack):${libdir} + lapack_libs = $(pc_libs lapack) + EOF + cat >> setup.cfg <<-EOF || die + [options] + zip_safe = False + EOF + + # Drop hashes to force rebuild of cython based .c code + rm cythonize.dat || die + + # TODO + sed -e 's:test_magic_square_sparse_no_presolve:_&:' \ + -i scipy/optimize/tests/test_linprog.py || die + sed -e "s:== 'levy_stable':in ('levy_stable', 'crystalball', 'ncf'):" \ + -i scipy/stats/tests/test_continuous_basic.py || die + + distutils-r1_python_prepare_all +} + +python_configure_all() { + # bug 721860 + test-flag-FC -fallow-argument-mismatch && + append-fflags -fallow-argument-mismatch +} + +python_compile() { + # FIXME: parallel python building fails, bug #614464 + export MAKEOPTS=-j1 + + ${EPYTHON} tools/cythonize.py || die + distutils-r1_python_compile \ + ${SCIPY_FCONFIG} +} + +python_test() { + # fails with bdist_egg. should it be fixed in distutils-r1 eclass? + distutils_install_for_testing ${SCIPY_FCONFIG} + cd "${TEST_DIR}/lib" || die "no ${TEST_DIR} available" + PYTHONPATH=. "${EPYTHON}" -c " +import scipy, sys +r = scipy.test('fast', verbose=2) +sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}" +} + +python_install_all() { + use doc && \ + local DOCS=( "${DISTDIR}"/${P}-ref.pdf ) \ + local HTML_DOCS=( "${WORKDIR}"/html/. ) + distutils-r1_python_install_all +} + +python_install() { + distutils-r1_python_install ${SCIPY_FCONFIG} + python_optimize +} + +pkg_postinst() { + elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER" + elog "to your prefered image viewer. Example:" + elog " echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc" +} |