gentoo resync : 31.03.2018

9 files changed, 139 insertions, 17 deletions

diff --git a/dev-perl/Ace/Ace-1.920.0-r3.ebuild b/dev-perl/Ace/Ace-1.920.0-r3.ebuild
new file mode 100644
index 000000000000..c8263c2086b5
--- /dev/null
+++ b/dev-perl/Ace/Ace-1.920.0-r3.ebuild
@@ -0,0 +1,113 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+DIST_NAME=AcePerl
+DIST_AUTHOR=LDS
+DIST_VERSION=1.92
+DIST_EXAMPLES=("examples/*")
+inherit perl-module
+
+DESCRIPTION="Object-Oriented Access to ACEDB Databases"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="test"
+
+RDEPEND="virtual/perl-Digest-MD5
+	dev-perl/Cache-Cache
+	dev-perl/GD
+	elibc_glibc? ( net-libs/libtirpc net-libs/rpcsvc-proto )
+"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+	sed -i 's/", "1")/", "3")/' "${S}/Makefile.PL" || die "Can't patch config"
+	cat > "${S}/acelib/wmake/DARWIN_DEF" <<EOF
+NAME = DARWIN
+COMPILER = clang -fwritable-strings -DACEDB4 -DPOSIX
+LINKER = clang
+
+LIBS = -lm
+
+EOF
+
+	if use elibc_glibc ; then
+		sed -i -e 's:^USEROPTS=:USEROPTS=-I/usr/include/tirpc :g' -e 's:^LIBS =:LIBS = -ltirpc:g' "${S}/acelib/wmake/LINUX_DEF"
+		export LIBS="-ltirpc"
+	fi
+
+	export MAKEOPTS="-j1"
+	perl-module_src_prepare
+}
+
+src_test() {
+	local MODULES=(
+		"Ace ${DIST_VERSION}"
+		"Ace::Freesubs 1.00"
+		"Ace::Graphics::Fk" # NO VERSION
+		"Ace::Graphics::Glyph"
+		"Ace::Graphics::Glyph::anchored_arrow"
+		"Ace::Graphics::Glyph::arrow"
+		"Ace::Graphics::Glyph::box"
+		"Ace::Graphics::Glyph::crossbox"
+		"Ace::Graphics::Glyph::dot"
+		"Ace::Graphics::Glyph::ex"
+		"Ace::Graphics::Glyph::graded_segments"
+		"Ace::Graphics::Glyph::group"
+		"Ace::Graphics::Glyph::line"
+		"Ace::Graphics::Glyph::primers"
+		"Ace::Graphics::Glyph::segments"
+		"Ace::Graphics::Glyph::span"
+		"Ace::Graphics::Glyph::toomany"
+		"Ace::Graphics::Glyph::transcript"
+		"Ace::Graphics::Glyph::triangle"
+		"Ace::Graphics::GlyphFactory"
+		"Ace::Graphics::Panel"
+		"Ace::Graphics::Track"
+		"Ace::Iterator 1.51"
+		"Ace::Local 1.05"
+		"Ace::Model 1.51"
+		"Ace::Object 1.66"
+		"Ace::Object::Wormbase"
+		"Ace::RPC 1.00"
+		"Ace::Sequence 1.51"
+		"Ace::Sequence::Feature"
+		"Ace::Sequence::FeatureList"
+		"Ace::Sequence::GappedAlignment 1.20"
+		"Ace::Sequence::Gene"
+		"Ace::Sequence::Homol"
+		"Ace::Sequence::Multi"
+		"Ace::Sequence::Transcript"
+		"Ace::SocketServer 1.01"
+		"GFF::Filehandle"
+# Need Ace::Browser
+# 		"Ace::Browser::AceSubs ${DIST_VERSION}"
+#		"Ace::Browser::GeneSubs ${DIST_VERSION}"
+#		"Ace::Browser::SearchSubs ${DIST_VERSION}"
+#		"Ace::Browser::SiteDefs ${DIST_VERSION}"
+#		"Ace::Browser::TreeSubs ${DIST_VERSION}"
+	)
+	local failed=()
+	for dep in "${MODULES[@]}"; do
+		ebegin "Compile testing ${dep}"
+			perl -Mblib="${S}" -M"${dep} ()" -e1
+		eend $? || failed+=( "$dep" )
+	done
+	if [[ ${failed[@]} ]]; then
+		echo
+		eerror "One or more modules failed compile:";
+		for dep in "${failed[@]}"; do
+			eerror "  ${dep}"
+		done
+		die "Failing due to module compilation errors";
+	fi
+	if ! has "network" "${DIST_TEST_OVERRIDE:-${DIST_TEST:-do parallel}}"; then
+		ewarn "This package needs network access to run its full test suite"
+		ewarn "For details, see:"
+		ewarn "https://wiki.gentoo.org/wiki/Project:Perl/maint-nodes/dev-perl/Ace"
+	else
+		perl-module_src_test
+	fi
+}
diff --git a/dev-perl/Ace/Manifest b/dev-perl/Ace/Manifest
index 7c1e5b8558be..ef3890c74a74 100644
--- a/dev-perl/Ace/Manifest
+++ b/dev-perl/Ace/Manifest
@@ -1,4 +1,5 @@
 DIST AcePerl-1.92.tar.gz 300163 BLAKE2B 4fac4d7f56d31f179a1a310688cde078371a1e6605b229016a5a2f3a32de01bf3421c459eeefcdfdd12df3baf34d6495c8e7998e1c66a47215ea2abd741303b6 SHA512 0db8392336dd48c58bdaf8d8d9ac6d1106124259f27fa95951aa8d496014e1e8b89ed87f6df276473e3bcb44a8d323f864178a9b84dd1e787d614bd0b8e93be9
 EBUILD Ace-1.920.0-r1.ebuild 390 BLAKE2B 0ebada0a7083cfeaf609a6fc94b1fefb274fd6907d6f41b8286d91714364c3c5bb51e1429ddc9b4fb3b75624367085caed1708a60444c0b6c48d2b17b5543394 SHA512 3ad41c3cc828bdc55beddf2852b5a7b98236416fded8b10367f7bfc0192fcd14b0ffd1f476792fd0c33571a394a80461fa6ceadeaf0bc1dc3520dc0f115db9bc
 EBUILD Ace-1.920.0-r2.ebuild 2549 BLAKE2B ddefb1e0b5efc25a98a9364497fd39475f0cb71796ffe7045a219095dc3c75711db6e2e746c2be4c565b9934660f39d5534fcde092a2844ec7bb1589a30801b7 SHA512 ba43b8facb594c8043c915e794130092f540b472b0df565b648e11fa809c73bf83aefb52a4723edb0f79c64109090447b07e1a4481ee9b3229af99c028d7c8c8
+EBUILD Ace-1.920.0-r3.ebuild 2953 BLAKE2B 357adf953c2150d200bb18026a2492d52962b660090b8f0176bd9e994d2902bfb77412d43261d722aef585e9b5bf1ada57753216db66bbf4883580f2469919da SHA512 84ac8eebb8f5eca442ad77a049702f5c5bf123f83dc8033ae7b48b6fcb3027452de0599d00fa9f5ee7f24c075c0ae6c1cd5f3d010bcd83e6ea917ad5bba6d501
 MISC metadata.xml 3416 BLAKE2B 4385d220ac60f2e41750bb1afeff4f9a9055526710db08c2688f1e3787a17f2d9943af22825c8ec554c832f2a428410578baf25044348cbc984114890adcc770 SHA512 aa3443c187165f3cf97e7110238cb039242345071f9e3f74ed40e39a9ce0720062706dd78539eff1553703ed5e8cf55d42b924ebae3cc992366358d300ec544d
diff --git a/dev-perl/DBD-mysql/DBD-mysql-4.44.0.ebuild b/dev-perl/DBD-mysql/DBD-mysql-4.44.0.ebuild
index b6c73047452a..1ae3af023780 100644
--- a/dev-perl/DBD-mysql/DBD-mysql-4.44.0.ebuild
+++ b/dev-perl/DBD-mysql/DBD-mysql-4.44.0.ebuild
@@ -10,7 +10,7 @@ inherit eutils perl-module
 DESCRIPTION="MySQL driver for the Perl5 Database Interface (DBI)"
 
 SLOT="0"
-KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ia64 ~mips ppc ppc64 ~s390 ~sh ~sparc ~x86 ~x86-fbsd ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
+KEYWORDS="~alpha amd64 ~arm ~arm64 ~hppa ia64 ~mips ppc ppc64 ~s390 ~sh ~sparc x86 ~x86-fbsd ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
 
 IUSE="test +ssl"
 
diff --git a/dev-perl/DBD-mysql/Manifest b/dev-perl/DBD-mysql/Manifest
index 2d2a76a07185..0a5bbf0a36c2 100644
--- a/dev-perl/DBD-mysql/Manifest
+++ b/dev-perl/DBD-mysql/Manifest
@@ -15,5 +15,5 @@ EBUILD DBD-mysql-4.37.0.ebuild 1973 BLAKE2B 072f8acba91a0512ed7b4f9ecd8c1dc71d14
 EBUILD DBD-mysql-4.41.0-r2.ebuild 2093 BLAKE2B 046ff0c8ddec85d2fab3b7ec4d7018c46609b54263846d81b513a770327315ca3bbcc34f2d09308610028cfd3cad85fcf9ea4d92b251cc4576add96bf475e742 SHA512 72f9938a6e98a0a1631eb75d97af59c0ddcb8b7e5436572ab3049967452aac9d6d0339fb7c07e2e7fea58038c2d14f7cd5635767baa43967b480e3e3189fbdbe
 EBUILD DBD-mysql-4.41.0.ebuild 1966 BLAKE2B 3bd3a45c3dec31844ade8b79edb2089dc20a627b0c8797947c0e0e0ea7780a47a8a60582d57361a0f3bfa833dc65f4686f61cd33c04f591b1b562ecf8e091b60 SHA512 88e2669b1feb2b6bdeec630a9fa2fc4dfd62b907d0af3ac0b97a90608a4113593f704ce92d14fd542c8b9760d3a4a345dfdec251359d30075da1a500526182e0
 EBUILD DBD-mysql-4.42.0.ebuild 1977 BLAKE2B f7e71ad84f2f9889e4b933b1bd9b1f41a01956ac112aff4184610193b3f413d5905e16ac32aed958739457c9b2dbd1ceec46fb1fa3cb56571d317ffbf75ffceb SHA512 ee15ba80bc64c0073a81f9883ceb0366e21aed63d3543eb75427166f01ffe0125087d4ea0aa196eed1c5c8596581664038bc9f41c2486c2ea5b8c4f68cf9c201
-EBUILD DBD-mysql-4.44.0.ebuild 1827 BLAKE2B 6d90132648d3e22b8372c481d0d3fe286e99970fbda163c3c6a3376625772c65ebbc73f9b5b940483cee3216c6c37de5f93f53d293176262bf48e6c1247c7b1b SHA512 2c331c81a103b6b6c7681de58344cfa25ca47e0978ca76c7400edb4354d4f1155213d46be9e8f3d17faddd2a187aa59dcaebfddae2d03f61dc5a51925ec706d0
+EBUILD DBD-mysql-4.44.0.ebuild 1825 BLAKE2B 2ee6ff393bac780dcdfe425bd3203778b430ccb592828a81eb18f70e7e6ec4e21958c2fee3c01b874f6ed8681ba12e109b24b428835e51acd73f135edb9b1a0e SHA512 5854a4bd2cd5048850dc8e85a83cf12eaf7297b78161f9ecddcfa30a9c267b8d7a446f76b37e9f78b0a86f632213e544095fc3ea82acaaf88c87d3427f5c372a
 MISC metadata.xml 876 BLAKE2B 72a484b9d7cef869858a3ac26315ca83317344de66a903072a93af8b80bdcd310d3a59084140181faaca40c1bf640e7b1f6baf9939254624acc166906f4da476 SHA512 05226b4f30741e8d77f5174491aee480a958e3cdf9b9484ff261b975805b82eee9ff865df97891c6107307c5cc19994764110f5461c3e80c9d8828b34e076968
diff --git a/dev-perl/Manifest.gz b/dev-perl/Manifest.gz
index a29253fc913a..3313ab63157d 100644
--- a/dev-perl/Manifest.gz
+++ b/dev-perl/Manifest.gz
diff --git a/dev-perl/Net-XMPP/Manifest b/dev-perl/Net-XMPP/Manifest
index 4af7a9627b6d..0a595edc9f77 100644
--- a/dev-perl/Net-XMPP/Manifest
+++ b/dev-perl/Net-XMPP/Manifest
@@ -1,4 +1,3 @@
-AUX 1.02-defined.patch 553 BLAKE2B 5ed7406b6a34e630661eef19d16d92d816c2464ea71e8b304b66fc22b1c1741b4e2725a45d5e13aa799f83bec05f4189e1c41cbf07727a8d4e3a9c52744e1f3b SHA512 a45eeb254e7b8507e43c4e38ecbb7c1ae570f2910b2fd2bebbeb498e47c6c4f8a1c08d26c5b36c2b9abb794c05798ef31d7a94a21bd0f74f3561e2fb65e5ac31
 AUX 1.05-no-dot-inc.patch 3578 BLAKE2B 7fea81108b326bc20a3bb804cad1a75dd6d8ae590bf392612f2745c4e95cdfebc73603a5b3178f74846372e5dce8258974548c63a53a3bbd329e8e38e1e0bbce SHA512 01c8572fdef916ff937d36356d308c441cb2512f34fd1a5e2458b02b9f9c79619addea75b108a5030668bb50f8f086c9f4b51faf1e7e16722d535335634ec405
 AUX 1.05-no-network-tests.patch 1569 BLAKE2B 68d736865c0f727c03b64ef1dc8654a903f8098056fb9d7b1975ebdb5f2b4e0c7493d712d2fe35c1bd5533e60cfee475e321b37b24f3d7d773df0134aa7c2a5b SHA512 a51cbbacd06b94a94881b5b36164d596d5ee2d9818fc1ae544ddc7468cb92f0c7041863cc9aad4eb16c9885bf4b946e8bfc9ef7087280417651b8c5d7f79dc56
 DIST Net-XMPP-1.05.tar.gz 103876 BLAKE2B 5ddc98125b26518c59aa4ab39a974b9cbf1575bd59bb66d5329a43e1d5c3d150f34cc93f545f2cd56846e7b4e46142c47aff7da9b279181a02a57bf95ff1757b SHA512 cdd5474fcbdf7ff6c7d1247f9828f5dfb1828c258af366a831bab8e5faab423b73aa16c34228818526ebcc3180ef0ccc52d6e6cb61e2fe689458b87ec7fab699
diff --git a/dev-perl/Net-XMPP/files/1.02-defined.patch b/dev-perl/Net-XMPP/files/1.02-defined.patch
deleted file mode 100644
index adac59b481e4..000000000000
--- a/dev-perl/Net-XMPP/files/1.02-defined.patch
+++ /dev/null
@@ -1,14 +0,0 @@
-https://rt.cpan.org/Public/Bug/Display.html?id=58333
-http://github.com/dap/Net-XMPP/commit/2d1164d7c50d7c034f3d1efb03ad9319b24dfd24
-
---- Net-XMPP-1.02/lib/Net/XMPP/Debug.pm
-+++ Net-XMPP-1.02/lib/Net/XMPP/Debug.pm
-@@ -151,7 +151,7 @@
-     my %args;
-     while($#_ >= 0) { $args{ lc pop(@_) } = pop(@_); }
- 
--    delete($args{file}) if (lc($args{file}) eq "stdout");
-+    delete($args{file}) if (defined $args{file} && lc($args{file}) eq "stdout");
- 
-     $args{time} = 0 if !exists($args{time});
-     $args{setdefault} = 0 if !exists($args{setdefault});
diff --git a/dev-perl/XML-TreePP/Manifest b/dev-perl/XML-TreePP/Manifest
index b4d183032925..e2dd992f073a 100644
--- a/dev-perl/XML-TreePP/Manifest
+++ b/dev-perl/XML-TreePP/Manifest
@@ -1,3 +1,4 @@
 DIST XML-TreePP-0.43.tar.gz 91382 BLAKE2B 2a7d89d6d5e3bcf965b001cf8e18465b1cdfdeb94cd96c77008beb16b559fc072bd24a5c954a12965e2a03d9707c372c779ac7ca1e2938807055e64f9e7ed077 SHA512 4289a0a8100ef15f62f0e303f13094371ac6f1b54d887be1ed7e2ea31d7f1f6fc28d4234cf96458074137f756db3fe452ded170d3ee576f7eb2cfc9996cc31d1
+EBUILD XML-TreePP-0.430.0-r1.ebuild 420 BLAKE2B dca0a26d0bfeaa7e3698504bb447201f8d072a58e56b43e60769b46bb2ffa38d3d1023518d580829f923cf8b4c56d2a77a3fab942611efaa846f99d9710d33d1 SHA512 a36dc564e15af19b0b354a865df86f1b827d4fb639c5be9e7bb24cbca2d792a2c027b2116b4f07abac862bf67b0ec30f1c904e842fd97b94ea930df387a06f5a
 EBUILD XML-TreePP-0.430.0.ebuild 460 BLAKE2B d8bdd19c61f7026cc24842c58bed6b174e09dd31f64f9431e57c59a6496a7edd3692f1beb8297277c307016f152357be3f98105f72625cade69690fb50d97b5c SHA512 54afbe53ede5530b0ffb2a61a102bd4b2fd347825da9a7977a70e22b3b3290ac57067a0b6159c90367a87cad01db034a840da75132759f8ee397fb6b1bd9c0a0
 MISC metadata.xml 464 BLAKE2B 08cb87d6a9682641c50be91f1d89cbc7bfb5f114f799bce0aaeff908675a7b3f2f559070597242bf9c2bc58408391be543adcb281999e8d159046312c54a743c SHA512 d5aeaa43384401788f7d1aa589615a31e6ce678a54b6bf960b7fb6740fa548cb0bfa69928ca6ff19c956920a83729409060b2c42dbb576bc7ce58fdc30134350
diff --git a/dev-perl/XML-TreePP/XML-TreePP-0.430.0-r1.ebuild b/dev-perl/XML-TreePP/XML-TreePP-0.430.0-r1.ebuild
new file mode 100644
index 000000000000..4e0e152b6cb2
--- /dev/null
+++ b/dev-perl/XML-TreePP/XML-TreePP-0.430.0-r1.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+DIST_VERSION=0.43
+DIST_AUTHOR="KAWASAKI"
+inherit perl-module
+
+DESCRIPTION="Pure Perl implementation for parsing/writing XML documents"
+
+SLOT="0"
+KEYWORDS="~amd64 ~arm ~ppc ~x86"
+IUSE=""
+
+RDEPEND="
+	dev-perl/libwww-perl
+"
+DEPEND="${RDEPEND}
+	virtual/perl-ExtUtils-MakeMaker
+"
+PERL_RM_FILES=("t/00_pod.t")