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authorV3n3RiX <venerix@redcorelinux.org>2021-04-28 20:21:43 +0100
committerV3n3RiX <venerix@redcorelinux.org>2021-04-28 20:21:43 +0100
commit40aaaa64e86ba6710bbeb31c4615a6ce80e75e11 (patch)
tree758c221bad35c9288d0bd6df9c7dfc226728e52c /dev-lang/R
parent8d5dbd847cbc704a6a06405856e94b461011afe3 (diff)
gentoo resync : 28.04.2021
Diffstat (limited to 'dev-lang/R')
-rw-r--r--dev-lang/R/Manifest10
-rw-r--r--dev-lang/R/R-3.4.1.ebuild203
-rw-r--r--dev-lang/R/R-3.6.3-r1.ebuild234
-rw-r--r--dev-lang/R/R-4.0.4.ebuild2
-rw-r--r--dev-lang/R/R-4.0.5.ebuild (renamed from dev-lang/R/R-4.0.2.ebuild)4
5 files changed, 6 insertions, 447 deletions
diff --git a/dev-lang/R/Manifest b/dev-lang/R/Manifest
index f34ed6d8c8e1..01b900e5e0ea 100644
--- a/dev-lang/R/Manifest
+++ b/dev-lang/R/Manifest
@@ -2,13 +2,9 @@ AUX R-3.4.1-parallel.patch 487 BLAKE2B bb596d66fab359511c6364ac06cbbe311decd3201
AUX R-3.4.1-rmath-shared.patch 899 BLAKE2B 0aba9c1c5417531647bed3829d53909e6f3983dea3f3de149c0ef270a8bc4eddc46dab4cbdc7cce78c0c163446a4d3a014afc9bc571f0d4a61cfa6827e40f16b SHA512 20c62b774149ae1959d28217a1be6f30968562de3ad5e4a8d7bfc7c579ca5c35fcd1304d68e222be0a37cb6db9b946fbe82d21a26fecccbecea1401b8c0b25d4
AUX R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch 469 BLAKE2B ee716b068316bbac0c07fe44bef739a491af5f4e90ba268cf7db428350763d498ab0b1bc9efa02ac885d0ac64aa5d076deaac094725766e340cbcd9d7e839b22 SHA512 cb7bc73fd0f1aa4159b25bc76318074662afddafdef8acc8caf20afb98da6c065c3bd0895c4a7a7f18a174d21d59c0f054a46aa513db1b5b622a110e7c54e171
AUX R-3.6.2-no-gzip-doc.patch 443 BLAKE2B 1154e9f67f08e1d8b286152bd093789a0b94b3a2422bdb54d1d1d03729bd892811e68121309c41ef4323ed31efcea82f3e265b37445e9870bbd88c5413311345 SHA512 99678dbf809761a2991cd5cbe6ff5ba8d1c3e9388f69d94b30726caae4eee29ae50ee74aa24e3851d41559f804381ec18a2cd818b97b5417bf7ae660c93ad2a6
-DIST R-3.4.1.tar.gz 30200109 BLAKE2B 03602e9a48759caee8ce047fa6273df7a54af089de4489e21953c0e3fc7bfdf720d924f1e0167d3dbf65f63ed42ac10dea8b45289b921cda1c0e6d25a0063ebb SHA512 19bd50c87dc001ef947c15c1760f27ac8986ff6b43c6d90d3093ae184e42963027ef06faf31ec57ac9e519af7a35a2f53f8ea23ef75d800ebbd02945cedc4651
-DIST R-3.6.3.tar.gz 33308185 BLAKE2B f82751e21d3b502132f8f27d4fc47a921fb085a50c3da3b45e08fbbdd1ab3d42e89b4fa6653a570c21176d79f492277b1d0b86c3c9f4da1386d8b6e4771d4d2c SHA512 9b1dc78922e431bd1af81e6e560b10ad04d121718f680fed32db735d561fd40ea6028759976722db11559f1a78fe684119b766f0567128cb2ee5003aa87a0931
-DIST R-4.0.2.tar.gz 33191186 BLAKE2B 2d5b99c17a9df48a36871f18701efacfaa1e6bb89c0e5c6516fc20966547f34f9079dc52ab18ac7816e0fed25d6230076246e83dc648501553fa2d0cad67b8e4 SHA512 b7330613ee9795f54cde3dd9f7509be83d9156fb8577c17179727ee01450db27704249f68bd48e0331e2df09c2d9833d8bb019c4f9ce9ba669df74650ff2e842
DIST R-4.0.4.tar.gz 33687611 BLAKE2B 40cdfd98fe6c9193deb729d151631c2b0f935accf5ea6251704b633d2688278af1a5a67317152be023fb4a10315c64e473f58276bb0c3fadb1141c35391ad22e SHA512 811c4407a083eb776f92c3cbacb1dc7eada8890a8c27678c6c82bef9db52b1afaefeb408fbe11e46922740adee498f32e7ddf7451b3ab89cf60773737e47f8be
+DIST R-4.0.5.tar.gz 32466444 BLAKE2B 5dbbd289f4fd6347b4109eecaf65b50b5793a83edddd2cb391c20473607f136d91a8e9f4ab9e453f6927d2ca9145762920424e3a1dcea89309afde56efd5d32c SHA512 6ff5b0f9cb6b17f66cde1f5585d1b33659dbae8919d34c2e593f68a0bff4d0425aa9704d99284d103702a9cd42f613311f3a87af6b939b1af65dcec80bf2ca8c
DIST R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion 13596 BLAKE2B 53338e4a1c4f68beb69247216e553dbcac47f660fbf032bfebf7a660e32d2cff5b11ed35411c52de7e1fd6e00bbf5b5ea19369a325fa0a38bd93d63dc3288cbd SHA512 9ccd19bb1b0c18a2f13035ccd6809447429e197e298fb4d1df808ef345d723b42f75a1b91c349f6dbb46e4a82e59ef33e11300c495d79b63d670d0c0f2b16a06
-EBUILD R-3.4.1.ebuild 6227 BLAKE2B c9c50a779452d2689119c1de9fd9b6b14dd915fb6ee263c655e998a0a690fe98d1a68f138ef82bf6e70b3ca58ecb02a9f8638a1a7b0f95fe474c37efb78be492 SHA512 b3d1e0f0a92c9f31c8a091736c507f0618ed0a5534b13905017715fc7ea114310a03baf963e0cc961a49cc0fc34e70d46c10eb886d170a74e462bace3465b702
-EBUILD R-3.6.3-r1.ebuild 7177 BLAKE2B 81e09b4946c208068077008d711858f49b799245ef2097b0e3c984b2261d79fa707be0d892991bc8ce0c3f5bf3c592c8e81ff4492a97f2da41ca903d4ca67351 SHA512 f1a41aae1e951fd48af91b92e76efb569d0cc4d1d5f7d34d010d5882e90a0bdc3b26997c22fa8f1725d739fde61cf189f5032c15a4b6be913958b597727b9ad8
-EBUILD R-4.0.2.ebuild 7331 BLAKE2B f170e5884f52ca8f1fa7a53c6a37487c35331b1464da87e2371ad73989870838ab6a2f1acc3d2e59b7e0cbbb48ebb42954df7aec2062407f6026276e0bd90cbf SHA512 d1bd84790276a6a8804e29373c534b75ed41bd4b2e0084aae990016e8d8918e58612a777aad246a44769b97515c6f5a1afb18ba7e2b13db782c46fadb130b389
-EBUILD R-4.0.4.ebuild 7314 BLAKE2B bb5cae73a12cf63b0b6d4bb6171fd04217a134671dc86d674d55d3f0c7c920597fd339cbb3db20f24fc1ed03849bc06ecc156c3382e393e26ac2d005caa90a10 SHA512 11bb80ce27c047394a6e4130507ce8a927c091a95fb371889b33ed9af055c6baaa9bd2fcbd3c7adea29cb2a815978e3b2ddfe45d885f3eb4cd5921eb3f3af885
+EBUILD R-4.0.4.ebuild 7311 BLAKE2B 63fc04096321ca5d5e3c947816ad02bf1b1fee47ea9e4500006ebc356dbf4aa70aca631497988ac33fb5a1e8ab2999a23f6b1d4519206a73993cefb79d2f9884 SHA512 6bcae68392035fcb25cf55e5e0dda41ad746ab5dcd1868477da801d8d7af82b0e3d0b52fa2d82009b43ea892bd9cf2c5b57c62aca4a7ee36a431e6f55b4cdf44
+EBUILD R-4.0.5.ebuild 7315 BLAKE2B 77445afa767b02617d92ad61c3c8af84e9a4eb3715579228129c254341382e08b474dae18b819bfe1b559f0e3a48e09a8bde653a16106047a10237c43ed1bb95 SHA512 3c8bbd24aca4985049f7bb6c13dddf22e0eb454658bbc7bd973920a802a35a7f180ba91792a5ca42f72887181d878647a60556d0d64611bd29eef241a3fab225
MISC metadata.xml 1140 BLAKE2B 774221eb531b4e80f0650b627b9ce53d9a2daf6342b1f19579d2d046e1c83aa497cc764870406b7ea3cf6cbae899cb6d460af92991d62bc6aea8da026a441822 SHA512 297c7e17998f92fb836b0599ce5221aee1ba1e7b1504edb348a602b695faf381d51f32f6118f5ef4bb353f02e92ffc5b3520b8d317d3e30a68a3cce0254fa6b1
diff --git a/dev-lang/R/R-3.4.1.ebuild b/dev-lang/R/R-3.4.1.ebuild
deleted file mode 100644
index 39b6d57442c8..000000000000
--- a/dev-lang/R/R-3.4.1.ebuild
+++ /dev/null
@@ -1,203 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib versionator toolchain-funcs
-
-# latest git commit for R bash completion: https://github.com/deepayan/rcompletion
-BCPV=78d6830e28ea90a046da79a9b4f70c39594bb6d6
-
-DESCRIPTION="Language and environment for statistical computing and graphics"
-HOMEPAGE="http://www.r-project.org/"
-SRC_URI="
- mirror://cran/src/base/R-3/${P}.tar.gz
- https://raw.githubusercontent.com/deepayan/rcompletion/${BCPV}/bash_completion/R -> ${PN}-${BCPV}.bash_completion"
-
-LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1"
-SLOT="0"
-KEYWORDS="amd64 arm64 ~hppa ~ia64 sparc x86 ~amd64-linux ~x86-linux"
-IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs tiff tk X"
-REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )"
-
-CDEPEND="
- app-arch/bzip2:0=
- app-arch/xz-utils:0=
- app-text/ghostscript-gpl
- >=dev-libs/libpcre-8.35:3=
- net-misc/curl
- virtual/blas:0
- || ( >=sys-apps/coreutils-8.15 app-misc/realpath )
- cairo? ( x11-libs/cairo:0=[X] x11-libs/pango:0= )
- icu? ( dev-libs/icu:= )
- jpeg? ( virtual/jpeg:0 )
- lapack? ( virtual/lapack:0 )
- perl? ( dev-lang/perl )
- png? ( media-libs/libpng:0= )
- readline? ( sys-libs/readline:0= )
- tiff? ( media-libs/tiff:0= )
- tk? ( dev-lang/tk:0= )
- X? ( x11-libs/libXmu:0= x11-misc/xdg-utils )"
-
-DEPEND="${CDEPEND}
- virtual/pkgconfig
- doc? (
- virtual/latex-base
- dev-texlive/texlive-fontsrecommended
- )"
-
-RDEPEND="${CDEPEND}
- >=sys-libs/zlib-1.2.5.1-r2:0[minizip]
- java? ( >=virtual/jre-1.5 )"
-
-RESTRICT="minimal? ( test )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-3.4.1-parallel.patch
- "${FILESDIR}"/${PN}-3.4.1-rmath-shared.patch
-)
-
-pkg_pretend() {
- [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
- if [[ ${MERGE_TYPE} != binary ]] && use openmp; then
- if ! tc-check-openmp; then
- ewarn "OpenMP is not available in your current selected compiler"
- die "need openmp capable compiler"
- fi
- FORTRAN_NEED_OPENMP=1
- fi
- fortran-2_pkg_setup
- filter-ldflags -Wl,-Bdirect -Bdirect
- # avoid using existing R installation
- unset R_HOME
- # Temporary fix for bug #419761
- if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then
- append-flags -fno-ipa-cp-clone
- fi
-}
-
-src_prepare() {
- default
-
- # fix packages.html for doc (gentoo bug #205103)
- sed -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \
- -i src/library/tools/R/Rd.R || die
-
- # fix Rscript path when installed (gentoo bug #221061)
- sed -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${EROOT%/}/usr/$(get_libdir)/${PN}\"':" \
- -i src/unix/Makefile.in || die "sed unix Makefile failed"
-
- # fix HTML links to manual (gentoo bug #273957)
- sed -e 's:\.\./manual/:manual/:g' \
- -i $(grep -Flr ../manual/ doc) || die "sed for HTML links failed"
-
- use lapack && \
- export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)"
-
- if use X; then
- export R_BROWSER="$(type -p xdg-open)"
- export R_PDFVIEWER="$(type -p xdg-open)"
- fi
- use perl && \
- export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}"
-
- # don't search /usr/local
- sed -i -e '/FLAGS=.*\/local\//c\: # removed by ebuild' configure.ac || die
- # Fix for Darwin (OS X)
- if use prefix; then
- if [[ ${CHOST} == *-darwin* ]] ; then
- sed -e 's:-install_name libR.dylib:-install_name ${libdir}/R/lib/libR.dylib:' \
- -e 's:-install_name libRlapack.dylib:-install_name ${libdir}/R/lib/libRlapack.dylib:' \
- -e 's:-install_name libRblas.dylib:-install_name ${libdir}/R/lib/libRblas.dylib:' \
- -e "/SHLIB_EXT/s/\.so/.dylib/" \
- -i configure.ac || die
- # sort of "undo" 2.14.1-rmath-shared.patch
- sed -e "s:-Wl,-soname=libRmath.so:-install_name ${EROOT%/}/usr/$(get_libdir)/libRmath.dylib:" \
- -i src/nmath/standalone/Makefile.in || die
- else
- append-ldflags -Wl,-rpath="${EROOT%/}/usr/$(get_libdir)/R/lib"
- fi
- fi
- AT_M4DIR=m4 eaclocal
- eautoconf
-}
-
-src_configure() {
- # --with-system-tre \
- # tre is patched from upstream
- econf \
- --enable-byte-compiled-packages \
- --enable-R-shlib \
- --disable-R-framework \
- --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \
- rdocdir="${EPREFIX}/usr/share/doc/${PF}" \
- $(use_enable java) \
- $(use_enable nls) \
- $(use_enable openmp) \
- $(use_enable profile R-profiling) \
- $(use_enable profile memory-profiling) \
- $(use_enable static-libs static) \
- $(use_enable static-libs R-static-lib) \
- $(use_with cairo) \
- $(use_with icu ICU) \
- $(use_with jpeg jpeglib) \
- $(use_with lapack) \
- $(use_with !minimal recommended-packages) \
- $(use_with png libpng) \
- $(use_with readline) \
- $(use_with tiff libtiff) \
- $(use_with tk tcltk) \
- $(use_with tk tk-config "${EPREFIX}"/usr/$(get_libdir)/tkConfig.sh) \
- $(use_with tk tcl-config "${EPREFIX}"/usr/$(get_libdir)/tclConfig.sh) \
- $(use_with X x)
-}
-
-src_compile() {
- export VARTEXFONTS="${T}/fonts"
- emake AR="$(tc-getAR)"
- emake -C src/nmath/standalone \
- shared $(use static-libs && echo static) AR="$(tc-getAR)"
- use doc && emake info pdf
-}
-
-src_install() {
- default
- emake -j1 -C src/nmath/standalone DESTDIR="${D}" install
-
- if use doc; then
- emake DESTDIR="${D}" install-info install-pdf
- dosym ../manual /usr/share/doc/${PF}/html/manual
- fi
-
- cat > 99R <<-EOF
- LDPATH=${EROOT%/}/usr/$(get_libdir)/${PN}/lib
- R_HOME=${EROOT%/}/usr/$(get_libdir)/${PN}
- EOF
- doenvd 99R
- newbashcomp "${DISTDIR}"/${PN}-${BCPV}.bash_completion ${PN}
- # The buildsystem has a different understanding of install_names than
- # we require. Since it builds modules like shared objects (wrong), many
- # objects (all modules) get an incorrect install_name. Fixing the build
- # system here is not really trivial.
- if [[ ${CHOST} == *-darwin* ]] ; then
- local mod
- pushd "${ED}"/usr/$(get_libdir)/R > /dev/null
- for mod in $(find . -name "*.dylib") ; do
- mod=${mod#./}
- install_name_tool -id "${EPREFIX}/usr/$(get_libdir)/R/${mod}" \
- "${mod}"
- done
- popd > /dev/null
- fi
- docompress -x /usr/share/doc/${PF}/{BioC_mirrors.csv,CRAN_mirrors.csv,KEYWORDS.db,NEWS.rds}
-}
-
-pkg_postinst() {
- if use java; then
- einfo "Re-initializing java paths for ${P}"
- R CMD javareconf
- fi
-}
diff --git a/dev-lang/R/R-3.6.3-r1.ebuild b/dev-lang/R/R-3.6.3-r1.ebuild
deleted file mode 100644
index bd149544e480..000000000000
--- a/dev-lang/R/R-3.6.3-r1.ebuild
+++ /dev/null
@@ -1,234 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib toolchain-funcs
-
-# latest git commit for R bash completion: https://github.com/deepayan/rcompletion
-BCPV=78d6830e28ea90a046da79a9b4f70c39594bb6d6
-
-DESCRIPTION="Language and environment for statistical computing and graphics"
-HOMEPAGE="http://www.r-project.org/"
-SRC_URI="
- mirror://cran/src/base/R-3/${P}.tar.gz
- https://raw.githubusercontent.com/deepayan/rcompletion/${BCPV}/bash_completion/R -> ${PN}-${BCPV}.bash_completion"
-
-LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1"
-SLOT="0"
-KEYWORDS="~amd64 ~arm64 ~hppa ~ia64 ~sparc ~x86 ~amd64-linux ~x86-linux"
-IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs test tiff tk X"
-REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )"
-
-# At least one package installation in the test suite requires TeX,
-# and will fail without it (bug #718056).
-BDEPEND="virtual/pkgconfig
- doc? (
- virtual/latex-base
- dev-texlive/texlive-fontsrecommended
- )
- test? ( virtual/latex-base )"
-DEPEND="
- app-arch/bzip2:0=
- app-arch/xz-utils:0=
- app-text/ghostscript-gpl
- dev-libs/libpcre:3=
- net-libs/libtirpc
- net-misc/curl
- virtual/blas:0
- || ( sys-apps/coreutils app-misc/realpath )
- cairo? ( x11-libs/cairo:0=[X=] x11-libs/pango:0= )
- icu? ( dev-libs/icu:= )
- jpeg? ( virtual/jpeg:0 )
- lapack? ( virtual/lapack:0 )
- perl? ( dev-lang/perl )
- png? ( media-libs/libpng:0= )
- readline? ( sys-libs/readline:0= )
- tiff? ( media-libs/tiff:0= )
- tk? ( dev-lang/tk:0= )
- X? ( x11-libs/libXmu:0= x11-misc/xdg-utils )"
-
-RDEPEND="${DEPEND}
- sys-libs/zlib:0[minizip]
- java? ( >=virtual/jre-1.5 )"
-
-RESTRICT="minimal? ( test )
- !test? ( test )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-3.4.1-parallel.patch
- "${FILESDIR}"/${PN}-3.4.1-rmath-shared.patch
- "${FILESDIR}"/${PN}-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch
- "${FILESDIR}"/${PN}-3.6.2-no-gzip-doc.patch
-)
-
-pkg_pretend() {
- [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
- if [[ ${MERGE_TYPE} != binary ]] && use openmp; then
- FORTRAN_NEED_OPENMP=1
- fi
- fortran-2_pkg_setup
- filter-ldflags -Wl,-Bdirect -Bdirect
- # avoid using existing R installation
- unset R_HOME
- # Temporary fix for bug #419761
- if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then
- append-flags -fno-ipa-cp-clone
- fi
-}
-
-src_prepare() {
- default
-
- # fix packages.html for doc (gentoo bug #205103)
- sed -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \
- -i src/library/tools/R/Rd.R || die
-
- # fix Rscript path when installed (gentoo bug #221061)
- sed -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${EROOT}/usr/$(get_libdir)/${PN}\"':" \
- -i src/unix/Makefile.in || die "sed unix Makefile failed"
-
- # fix HTML links to manual (gentoo bug #273957)
- sed -e 's:\.\./manual/:manual/:g' \
- -i $(grep -Flr ../manual/ doc) || die "sed for HTML links failed"
-
- use lapack && \
- export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)"
-
- if use X; then
- export R_BROWSER="$(type -p xdg-open)"
- export R_PDFVIEWER="$(type -p xdg-open)"
- fi
- use perl && \
- export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}"
-
- # don't search /usr/local
- sed -i -e '/FLAGS=.*\/local\//c\: # removed by ebuild' configure.ac || die
- # Fix for Darwin (OS X)
- if use prefix; then
- if [[ ${CHOST} == *-darwin* ]] ; then
- sed -e 's:-install_name libR.dylib:-install_name ${libdir}/R/lib/libR.dylib:' \
- -e 's:-install_name libRlapack.dylib:-install_name ${libdir}/R/lib/libRlapack.dylib:' \
- -e 's:-install_name libRblas.dylib:-install_name ${libdir}/R/lib/libRblas.dylib:' \
- -e "/SHLIB_EXT/s/\.so/.dylib/" \
- -i configure.ac || die
- # sort of "undo" 2.14.1-rmath-shared.patch
- sed -e "s:-Wl,-soname=libRmath.so:-install_name ${EROOT}/usr/$(get_libdir)/libRmath.dylib:" \
- -i src/nmath/standalone/Makefile.in || die
- else
- append-ldflags -Wl,-rpath="${EROOT}/usr/$(get_libdir)/R/lib"
- fi
- fi
- AT_M4DIR=m4
- eautoreconf
-}
-
-src_configure() {
- # --with-system-tre \
- # tre is patched from upstream
- econf \
- --enable-byte-compiled-packages \
- --enable-R-shlib \
- --disable-R-framework \
- --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \
- rdocdir="${EPREFIX}/usr/share/doc/${PF}" \
- $(use_enable java) \
- $(use_enable nls) \
- $(use_enable openmp) \
- $(use_enable profile R-profiling) \
- $(use_enable profile memory-profiling) \
- $(use_enable static-libs static) \
- $(use_enable static-libs R-static-lib) \
- $(use_with cairo) \
- $(use_with icu ICU) \
- $(use_with jpeg jpeglib) \
- $(use_with lapack) \
- $(use_with !minimal recommended-packages) \
- $(use_with png libpng) \
- $(use_with readline) \
- $(use_with tiff libtiff) \
- $(use_with tk tcltk) \
- $(use_with tk tk-config "${EPREFIX}"/usr/$(get_libdir)/tkConfig.sh) \
- $(use_with tk tcl-config "${EPREFIX}"/usr/$(get_libdir)/tclConfig.sh) \
- $(use_with X x)
-}
-
-src_compile() {
- export VARTEXFONTS="${T}/fonts"
- emake AR="$(tc-getAR)"
- emake -C src/nmath/standalone \
- shared $(use static-libs && echo static) AR="$(tc-getAR)"
- use doc && emake info pdf
-}
-
-src_install() {
- default
- emake -j1 -C src/nmath/standalone DESTDIR="${D}" install
-
- if use doc; then
- emake DESTDIR="${D}" install-info install-pdf
- dosym ../manual /usr/share/doc/${PF}/html/manual
- fi
-
- cat > 99R <<-EOF
- LDPATH=${EROOT}/usr/$(get_libdir)/${PN}/lib
- R_HOME=${EROOT}/usr/$(get_libdir)/${PN}
- EOF
- doenvd 99R
- newbashcomp "${DISTDIR}"/${PN}-${BCPV}.bash_completion ${PN}
- # The buildsystem has a different understanding of install_names than
- # we require. Since it builds modules like shared objects (wrong), many
- # objects (all modules) get an incorrect install_name. Fixing the build
- # system here is not really trivial.
- if [[ ${CHOST} == *-darwin* ]] ; then
- local mod
- pushd "${ED}"/usr/$(get_libdir)/R > /dev/null
- for mod in $(find . -name "*.dylib") ; do
- mod=${mod#./}
- install_name_tool -id "${EPREFIX}/usr/$(get_libdir)/R/${mod}" \
- "${mod}"
- done
- popd > /dev/null
- fi
-
- # Users are encouraged to access some of the the R documentation
- # interactively, through functions like "contributors()" that
- # tries to open the "AUTHORS" file. Other files can be accessed
- # by name with RShowDoc(), and the documentation for e.g. license()
- # and RShowDoc() suggests a few of these names. Here we try to
- # collect as many names as possible that a user might actually
- # try to view through R, because if we don't decompress them,
- # then R doesn't know what to do with 'em. Bug #556706.
- INTERACTIVE_DOCS=(
- AUTHORS
- COPYING
- FAQ
- NEWS
- THANKS
- )
-
- # Other data sources that are shipped as "documentation," but which
- # need to be accessible via their original unmolested filenames.
- INTERACTIVE_DATA=(
- BioC_mirrors.csv
- CRAN_mirrors.csv
- KEYWORDS.db
- NEWS.rds
- )
-
- NOCOMPRESS_DOCS=( "${INTERACTIVE_DOCS[@]}" "${INTERACTIVE_DATA[@]}" )
-
- for f in "${NOCOMPRESS_DOCS[@]}"; do
- docompress -x "/usr/share/doc/${PF}/${f}"
- done
-}
-
-pkg_postinst() {
- if use java; then
- einfo "Re-initializing java paths for ${P}"
- R CMD javareconf
- fi
-}
diff --git a/dev-lang/R/R-4.0.4.ebuild b/dev-lang/R/R-4.0.4.ebuild
index 71c2eb33b3f1..e85bf329f623 100644
--- a/dev-lang/R/R-4.0.4.ebuild
+++ b/dev-lang/R/R-4.0.4.ebuild
@@ -16,7 +16,7 @@ SRC_URI="
LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1"
SLOT="0"
-KEYWORDS="amd64 ~arm64 ~hppa ~ia64 ~sparc ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 arm64 ~hppa ~ia64 sparc x86 ~amd64-linux ~x86-linux"
IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs test tiff tk X"
# One test required profiling in v4.0.2, check the upstream bug:
diff --git a/dev-lang/R/R-4.0.2.ebuild b/dev-lang/R/R-4.0.5.ebuild
index f900a51189f9..560e83d01f72 100644
--- a/dev-lang/R/R-4.0.2.ebuild
+++ b/dev-lang/R/R-4.0.5.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
-inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib toolchain-funcs
+inherit bash-completion-r1 autotools flag-o-matic fortran-2 toolchain-funcs
# latest git commit for R bash completion: https://github.com/deepayan/rcompletion
BCPV=78d6830e28ea90a046da79a9b4f70c39594bb6d6