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-rw-r--r--sci-libs/blas-reference/Manifest4
-rw-r--r--sci-libs/blas-reference/blas-reference-20151113-r1.ebuild4
-rw-r--r--sci-libs/blas-reference/blas-reference-20161223.ebuild4
-rw-r--r--sci-libs/cblas-reference/Manifest4
-rw-r--r--sci-libs/cblas-reference/cblas-reference-20151113-r2.ebuild4
-rw-r--r--sci-libs/cblas-reference/cblas-reference-20161223.ebuild4
-rw-r--r--sci-libs/dcmtk/Manifest2
-rw-r--r--sci-libs/dcmtk/dcmtk-3.6.0.ebuild26
-rw-r--r--sci-libs/geos/Manifest8
-rw-r--r--sci-libs/geos/files/geos-3.5.0-autoconf-detect-isnan.patch25
-rw-r--r--sci-libs/geos/files/geos-3.5.0-phpconfig-path.patch29
-rw-r--r--sci-libs/geos/files/geos-3.5.0-std-isnan.patch26
-rw-r--r--sci-libs/geos/geos-3.5.0-r2.ebuild135
-rw-r--r--sci-libs/geos/geos-3.6.2.ebuild (renamed from sci-libs/geos/geos-3.5.0.ebuild)35
-rw-r--r--sci-libs/itpp/Manifest2
-rw-r--r--sci-libs/itpp/itpp-4.3.1-r1.ebuild6
-rw-r--r--sci-libs/lapack-reference/Manifest4
-rw-r--r--sci-libs/lapack-reference/lapack-reference-3.6.0.ebuild4
-rw-r--r--sci-libs/lapack-reference/lapack-reference-3.7.0.ebuild4
-rw-r--r--sci-libs/libgeodecomp/Manifest2
-rw-r--r--sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild4
-rw-r--r--sci-libs/mathgl/Manifest2
-rw-r--r--sci-libs/mathgl/mathgl-2.3.4.ebuild4
-rw-r--r--sci-libs/neartree/Manifest2
-rw-r--r--sci-libs/neartree/neartree-5.1.1.ebuild2
-rw-r--r--sci-libs/orocos-bfl/Manifest2
-rw-r--r--sci-libs/orocos-bfl/orocos-bfl-0.8.0.ebuild4
-rw-r--r--sci-libs/scalapack/Manifest2
-rw-r--r--sci-libs/scalapack/scalapack-2.0.2.ebuild4
-rw-r--r--sci-libs/superlu/Manifest2
-rw-r--r--sci-libs/superlu/superlu-5.2.1-r1.ebuild2
31 files changed, 71 insertions, 291 deletions
diff --git a/sci-libs/blas-reference/Manifest b/sci-libs/blas-reference/Manifest
index 3155242ef956..21a83050c60f 100644
--- a/sci-libs/blas-reference/Manifest
+++ b/sci-libs/blas-reference/Manifest
@@ -8,8 +8,8 @@ DIST lapack-3.6.0.tgz 6792324 SHA256 a9a0082c918fe14e377bbd570057616768dca76cbdc
DIST lapack-3.7.0.tgz 7359812 SHA256 ed967e4307e986474ab02eb810eed1d1adc73f5e1e3bc78fb009f6fe766db3be SHA512 e4f4c7d0ba8a096eeb813160c6dbcdd535647df6b2ad5beac9181908158956b31d1a9554ec9b9836fd44fe7404c1f377b297cbb20d744f20d70e357fd246c91b WHIRLPOOL d536508015e081395bda83b84bf4e5b1d6e8e517ea38f6afcaf40e96d892b26b8b1034954d5cd79cce5033d6653e178b5d27a46deecfa7466cd0bdaafcf9f18f
DIST lapack-lite-3.1.1.tgz 5332509 SHA256 505a13272d0d71c45ea52be2de74b0562b234ea3ccf5160665c7a2ee74a58437 SHA512 492b932ef313339ce6b4e63ac8f778489e6870b0eb85f7b086f3c844e75f98e7f85382c7556dfa368ab8320b6f02d1df8ccfcb40b5c0b7c2d74518b7c309e75c WHIRLPOOL 11145043d16b8c2972229e17a24e92e62987c08e84d91b81a7f4767b80f13844faffb2a2798b321a78c7127d849a0fd60cbb1605f03e150b4eaa6c230f0e7fdd
EBUILD blas-reference-20070226-r4.ebuild 1960 SHA256 1bb46d39ad58ce482b69d7cebb233c987b61f3c4f2855535c81ad8a046a8d28d SHA512 00fa4c79ec1e3607f58a91ce9fea701a681e1a35258f59e437ea46daa7e72348eb7a3e84a49b9810a26f3b70eef4098f391e714fce1514ad5ed696ac709ce2ca WHIRLPOOL 77c7239af936af1ae2a88940c26c89a75eaaaee8a16ac87fde293e37a0e4b91a9b69ea5f3f6dd4f7333c1aaee43472d70d86c85f61d823772188804aac3bbd3c
-EBUILD blas-reference-20151113-r1.ebuild 2360 SHA256 84596dc781d2c57d376db071370ba4245025a0616b256b3f7fc80c43eb8cc272 SHA512 bb2962786f1d0235fd70661513a1a852df512f9f188fdd019cadad5c8384d4197d1fe7f88e37d7d01d3adb3f2fb6a3d6e29d47fcf6a7f0452d66ac1e2f2f859c WHIRLPOOL 2733a1d8142eefe57cb4a8c5738d4e175d6a786622ad5859c87121debfef7ceb6d0bcf98d9c2aa2f01f853929bda62fa93c3d4bbf4c88b3d4f3da349148f1439
-EBUILD blas-reference-20161223.ebuild 2596 SHA256 efebe8606bbc1fdd658bee190e67238f6c291b849611e2b8b4ff1b503030489b SHA512 5ed51142a915bcdd7c62c25468af93e1c6ad8862a729706c223662780a71ac3e43d3bedbf1cc75936e7fbc73d69460516f9e64eb0b4344af9417e59e737c3001 WHIRLPOOL b042b76b46398596c4ab26c9eb14a8df37220bbb97fb995ff6a64ef28a7010eda46eff52dd337bc0c9a215ffd1960464b072604db691a6d51be2a187f91ab218
+EBUILD blas-reference-20151113-r1.ebuild 2347 SHA256 35cbf37643468feb339dac601d73f13a69a5834e1d020de0762d378e1b0cee17 SHA512 0d26f418364f8c3d3bd44a3d476a8462eedb8faf2153400818b4297d5f590a3e8f3cbb94d8edefcfd63e4163b5df29d18142565a3e4cea129797c13fc8ce9e1b WHIRLPOOL ffd44ffcde40b56aa9f847c757d46e49c11e1dc43b38f56d4f86093f8945b746fae97fb587eb23b9ef82f917417517a134150fc4a958560e02b888ddaf8f9708
+EBUILD blas-reference-20161223.ebuild 2583 SHA256 01bb4b3820f390dcfd01695cef5fe8d510c2e734ebb626958f4f153476597410 SHA512 e5550fb5f01ce7063548e245874f4551d931fc2cac2002ccf286afed9156994e76b6ae038ae4f82b5f818d1624667a95941b2499a92704fb4b9c5234ac2b8772 WHIRLPOOL 4d54a1c4ad0d964294fde0cd74cc80f5521624a29ee751a94d422af7c303001e06dc37b5e62cd543c262a7bd10cbb6fe887dca7addb91ddd197ff838dbf215cc
MISC ChangeLog 6580 SHA256 7c93df198bfe1c0f78e3cdc622a25212007dbea26c18f89ad4d55065fd4ecb5e SHA512 6bdc2e1ae7094b3f8dde2f84d39273849fa4fecbe52e8c5736a9667b8518e1f82ea9cb458ef54677425c127f45d1fdadf48b3859b3b45b9a169d837573652b7b WHIRLPOOL 2d77f88c8327cc28b0457d657313f21a709bedf79773bad714c2d56a154ac6cd9755939fd8f8b076f5fc45befce5e12f6b051467ed5331218c695cc677868aab
MISC ChangeLog-2015 12329 SHA256 770d0c6984dcfbaecc41a17bdf4bffe8572ca35e6c961d0ae23c02aa4e627eb6 SHA512 3411be66ce5af9245d33e1694f5c52680100087571e0f78c6999b3bf1a77564fc3c140dfcd1ad811fb3fb353434855a04f3d9e960de0316a400d5425296a009a WHIRLPOOL a33dcfb7876ce4a921ff4681135d8a773e0172c710348edc6d2ab609190ab63808577b0c1f5217128abf9c3a6b59287590a225a5d8975b6f9b08a41894c4086c
MISC metadata.xml 801 SHA256 03e6ff5f6e3e37a6052af03c818dc7c927f21e2c560bd9a5ffa4599940b6b9b3 SHA512 78ca8d7459ba5bc81f5f821d9020023d01610d1fd55157bf566890a5c80ff8f83ca1139304319ee41b04f04b559c9e377037c04a1fbdd8dfde3e62f7ca6ff9fe WHIRLPOOL d7a5d2da463582995b1570285ed3d13dbf8aded3cf9dbf24eea6cb87c7e4233f88052ed0be280d96ea97f74de70914016174018b7087059a217e6f14535d79d9
diff --git a/sci-libs/blas-reference/blas-reference-20151113-r1.ebuild b/sci-libs/blas-reference/blas-reference-20151113-r1.ebuild
index 6a37c36168fc..274ff2078119 100644
--- a/sci-libs/blas-reference/blas-reference-20151113-r1.ebuild
+++ b/sci-libs/blas-reference/blas-reference-20151113-r1.ebuild
@@ -26,9 +26,7 @@ S="${WORKDIR}/${LPN}-${LPV}"
PATCHES=( "${FILESDIR}/lapack-reference-${LPV}-fix-build-system.patch" )
src_prepare() {
- epatch "${PATCHES[@]}"
-
- eapply_user
+ cmake-utils_src_prepare
ESELECT_PROF=reference
diff --git a/sci-libs/blas-reference/blas-reference-20161223.ebuild b/sci-libs/blas-reference/blas-reference-20161223.ebuild
index f24a30a53724..65ef230c1372 100644
--- a/sci-libs/blas-reference/blas-reference-20161223.ebuild
+++ b/sci-libs/blas-reference/blas-reference-20161223.ebuild
@@ -26,9 +26,7 @@ S="${WORKDIR}/${LPN}-${LPV}"
PATCHES=( "${FILESDIR}/lapack-reference-${LPV}-fix-build-system.patch" )
src_prepare() {
- epatch "${PATCHES[@]}"
-
- eapply_user
+ cmake-utils_src_prepare
ESELECT_PROF=reference
diff --git a/sci-libs/cblas-reference/Manifest b/sci-libs/cblas-reference/Manifest
index d23317673115..f3168245128c 100644
--- a/sci-libs/cblas-reference/Manifest
+++ b/sci-libs/cblas-reference/Manifest
@@ -7,8 +7,8 @@ DIST cblas.tgz 197694 SHA256 9b49d7177fda62b6141bf2ca29e475e86f0b12d8f72e0b94405
DIST lapack-3.6.0.tgz 6792324 SHA256 a9a0082c918fe14e377bbd570057616768dca76cbdc713457d8199aaa233ffc3 SHA512 bc50441d415ef8896dd7626d77c6104184b996e758704366288089f03d4c99d068e33153b0d13305310886017e5d2e716130f812a95cfcad36ef37fe20417ab8 WHIRLPOOL 5576d0a81b2645fe95ef7011cc398f31142b8dcd01cdf5945e3db0e73ae1768766ea54254b40f4c6a581a6fb77b911595fccd597be0536833118af5877bb0c64
DIST lapack-3.7.0.tgz 7359812 SHA256 ed967e4307e986474ab02eb810eed1d1adc73f5e1e3bc78fb009f6fe766db3be SHA512 e4f4c7d0ba8a096eeb813160c6dbcdd535647df6b2ad5beac9181908158956b31d1a9554ec9b9836fd44fe7404c1f377b297cbb20d744f20d70e357fd246c91b WHIRLPOOL d536508015e081395bda83b84bf4e5b1d6e8e517ea38f6afcaf40e96d892b26b8b1034954d5cd79cce5033d6653e178b5d27a46deecfa7466cd0bdaafcf9f18f
EBUILD cblas-reference-20030223-r6.ebuild 1864 SHA256 64dc514f5538e71f818ca553bab89d252f01ed9869c8476b7ffaf603d8582bbb SHA512 bdcf2929e1965d470956a7a7ac63f06ed3e231b30f962db37e5208f03504ddf69e103c4aa014cd7dff0dd45801c0ee9f1c3a1c0491c275002220ce8031ca7e8b WHIRLPOOL 84ea8756d4329a8af78376177972f577c3dd53973c8a253487e6f52463b564d49b4cd8c0d8624c8df042abe828c334f7941e49797d08fde1be487b132b465939
-EBUILD cblas-reference-20151113-r2.ebuild 2638 SHA256 ca9ac5b80bd9a00e8136b0ea9035c7c5a2633d3987b4c003c3016db4ab64a308 SHA512 2fe22593ea81990044844998081a699dcb8a548457d3431fdad79698f0cccec639126d1f6ee6e44f459bb9e18238ce28eefd348df8345abe29add7441536819f WHIRLPOOL 8baa5d7d3d36ec6eb58afb7820cce59537df800739efc4bf4ea0124c97c900e0b655cdcfa714a69dd659e0115730a42db98d1a2497e5ac42445dc1a06d647d45
-EBUILD cblas-reference-20161223.ebuild 2645 SHA256 ee63796af36280b193fb537becf095bb274862fb7f014e458455f775d12e0cf1 SHA512 36e2df411e6524c2e19b376064b67b8298c098315e0b43c8aa33373f5b136c9e58800ee1daeb2149e469820d45071efbe63de1f44b8db8f60fe9246dbb78238d WHIRLPOOL a048315d9e40f74adaf10989b8a2f15a4444941a6e8970aea12b46311dfe9692f8f719b065142a4fc941325b9d801434e44fada936fb231c6d517d9c273aa1a6
+EBUILD cblas-reference-20151113-r2.ebuild 2625 SHA256 fb4097e6dd8f0b15d7a55672a5a05071c5ed7289ff3d4a6722f89ec901556d39 SHA512 42d7ead9609f038f774b42b3e6f93d31939d13780d8cad052e2e57c06386ce7f1fec7caa8694714f7fee8122e38298e85436a72fc902e2e5738e0783636a37cc WHIRLPOOL 4ac30f71e13b198c53a998328b7902c9dc7ba4c5d439e886c8e0dd7cba8e77f1d1c7c5ab2bb08690caf1ae743ac902dc8b0f9264d7726c7d7e84cb31f8914ea2
+EBUILD cblas-reference-20161223.ebuild 2632 SHA256 b0acc1080f035e7e4b1e368a2ea623eb01a457e8350539b1cca4f7398e985b69 SHA512 6663e47a9c48b6e67fe3fa32ff0de51ee1265daa7da189f9017a622817b4eade9b9174e852af5d17018b7846e18d5d5a56dad8212ea38ef31076843d31f3a50d WHIRLPOOL 23ffcc7c88ca6fa757ef3c4b6ec18849501660a3cf911c312439857409651c6ca2a789f538b2a9b5bea49821ce08f6fc583375528a70bf0073e999de368119b6
MISC ChangeLog 5964 SHA256 28c85c17b3d096dcd3e1b01c09809f6258c4f7d894529814602e38edfe126864 SHA512 e241d46e868c82cff6c45a8c7fbea8aca3d4e7907dfc53b18c7243cf52b0b079873fa24357360b3c5e029d8c06ec6c4c73eda97cfb18666bdf7ab0fd2e03a582 WHIRLPOOL 31e5ae7bab6933cd167ef52a1e15273433311625961bf2f7b9a58b03f1a47b696725d9cb0b8194d0f79617819b76b7ccea440c398e562d120092a35d309bcd6e
MISC ChangeLog-2015 7462 SHA256 bc0aa53d6784515668f26bbe89422b9b655e1988ed0e61c397cc5b7e6ad92deb SHA512 a88a60db296c84f3c23eed0c3c236d529b7f86f49badb46ea93a5ef7b4f6fe843f0f03364e82602836b123552be96f527c846b6ce9a07a4dbc687cb1053ea10c WHIRLPOOL 27a9f46ce763eb5ce3493911596a7a3adaaa35bf9ad5444f435ac9b364640f6af597ad4ded2787e429226c444f88fd80cbd07ef761da61c625d2236909deab09
MISC metadata.xml 836 SHA256 fe66768f8c8999a9009ad8347d730212dc22e5c62a8277dce73324fd3d31e39f SHA512 5e3394b15042b221806f47a96bc5b1bb09a004f9dc30639595c6a3264c7c92af3fec769b87a1702eba2f8a7c06580e7c62cbe22577ce93e35886c9db1aa309b3 WHIRLPOOL 20c5144410588e803afde01ca85aca278814e644dd16dcfeb4dd7e4f2b712438a24639898eb531c2787af7b446d18a6469d70271052f1810fdeabd7c13c36b21
diff --git a/sci-libs/cblas-reference/cblas-reference-20151113-r2.ebuild b/sci-libs/cblas-reference/cblas-reference-20151113-r2.ebuild
index 723c8287af30..90ce15319a0e 100644
--- a/sci-libs/cblas-reference/cblas-reference-20151113-r2.ebuild
+++ b/sci-libs/cblas-reference/cblas-reference-20151113-r2.ebuild
@@ -26,9 +26,7 @@ S="${WORKDIR}/${LPN}-${LPV}"
PATCHES=( "${FILESDIR}/lapack-reference-${LPV}-fix-build-system.patch" )
src_prepare() {
- epatch "${PATCHES[@]}"
-
- eapply_user
+ cmake-utils_src_prepare
ESELECT_PROF=reference
diff --git a/sci-libs/cblas-reference/cblas-reference-20161223.ebuild b/sci-libs/cblas-reference/cblas-reference-20161223.ebuild
index e03c6408cb89..8ad5308167eb 100644
--- a/sci-libs/cblas-reference/cblas-reference-20161223.ebuild
+++ b/sci-libs/cblas-reference/cblas-reference-20161223.ebuild
@@ -26,9 +26,7 @@ S="${WORKDIR}/${LPN}-${LPV}"
PATCHES=( "${FILESDIR}/lapack-reference-${LPV}-fix-build-system.patch" )
src_prepare() {
- epatch "${PATCHES[@]}"
-
- eapply_user
+ cmake-utils_src_prepare
ESELECT_PROF=reference
diff --git a/sci-libs/dcmtk/Manifest b/sci-libs/dcmtk/Manifest
index e62a553429b4..20ea533eff99 100644
--- a/sci-libs/dcmtk/Manifest
+++ b/sci-libs/dcmtk/Manifest
@@ -7,6 +7,6 @@ AUX dcmtk_version_number.patch 5439 SHA256 f2d250b9a2d747b86a0c62ad63e1ff19dda92
AUX png_tiff.patch 620 SHA256 67d413c13185b8d2b17dc6f6743a499e078259bdc615f4c6bf4dea5ec8252cd5 SHA512 b6c30e40ffcabf77f3dd04dbf5ba76ac0e86972e06eec81a1833c472099e7b207c4343208dc756f650f5b5ff77df6b950b0acb24c43029f30e2d67a3f882fab2 WHIRLPOOL 3f87b67965ecaa309a57efb2c2f5ed6fc49fd52fbf5dd03fc624c44825f6ed00af87330eba47ea0c57aeff5e843d93d847b565096b7fbb102764c71d6369b458
AUX regression_stacksequenceisodd.patch 4989 SHA256 913dc47190c94730021dc3ef466f490b78064529b951b9374c6e030501560bdc SHA512 bb126c947646ca3274863b8517478e738fcbe16f3e1e0bb75b8601ad2b5e6492400f96a89aaf25f683b06f6f3f9dad76391d5adc62177496cbffc0309aa7dc72 WHIRLPOOL 972a12607bb2e98a796af4dfaee679e8ecc4a93fc5f60ba71af568ee1ddf76b479b08469269463329c0810f9105db2a166f19b0e6865f89551dc9284b37b2661
DIST dcmtk-3.6.0.tar.gz 4673121 SHA256 cfc509701122adfa359f1ee160e943c1548c7696b607dbb646c5a06f015ed33a SHA512 2a9d866bafcaea72d889d24b51ff2341ee39c717aacf9ae5825c8588cd5cb01c3e341b6173abce751f6cb32c45be8888e81ccb08967cae2cca7fdcb2b61be53c WHIRLPOOL 88538048a7534847c5c1450be0ccc94979ab20be8fc1a05a944b4a7f8f627578d585e91a30984f75ae0f1c29bca0c615c3b290cc6c0965b6e7ddd23e31ba3cd9
-EBUILD dcmtk-3.6.0.ebuild 2301 SHA256 2c6fd396452bf03bf4ae5a7f538a7cef8fa442e1804e27a44d5d7999dc291f91 SHA512 5cda12c21fe8acb7ad46a0b5ffb97d5e35fc3d6b77da3465ba08771df7e48b81331217d3a256f821ec5bc14da3f973f9ad012db3af0bb8db9b446bc35fb02ca4 WHIRLPOOL 6a819943545fcc5769bdd337a8cbcfa9966c4d795fbbe7975cdb59182bba8030a1f1f7d4607f82f917042b562c1520fbd5b9df0d35de40d0c702a93646521843
+EBUILD dcmtk-3.6.0.ebuild 2312 SHA256 b4e6d850cea2876d6fb28d26c119de5e06c6ddc8b6627c4540e8afaaa0422c2d SHA512 9c850d90eaf30a27ff22730b8766284e4a5f06d6131bac7d29f5942985215e82fcfee9b833d2c6f108f96a9d770c76379c6eb83842fd57b86a5c1187649c7264 WHIRLPOOL a32026b0a239223045bdb6222d14be33d9fadfb6475dfcdf4db80329f32f14fa42b0dc3db57659de421cfa8738bd789aabf51fa0cdbdb8bbac6f887bc187b355
MISC ChangeLog 1007 SHA256 89c4cf17dd76851de7e684ee5a3f27505a2354a91f486d787dd77fca23b4f76b SHA512 9eb549a4033e8a8bac7c7f3201289ff5b88176afb6f4fc8b294c70fda6ec6b525ca5fe446288fd0767f92aa5b76741b008dd7f26d6ea6fec8723d22296a2d50d WHIRLPOOL f269ab42d9484645ba1def93b51e3c8bc2a61c0b68a6dcbb3fc0a5ef8179691b7010b56bfb5fcdd6b8098720a5967bab2b1931280e53740fea510403af89ea11
MISC metadata.xml 317 SHA256 bca569e145ba074e5b6882e2a7da0b83e7585fb53f2e1af17aae56b7ec66fd18 SHA512 0c6bb7cc6f8d56a7809354d0630ee49f33b63f7b60ad0a0ccbbfd7f28391a4c6b0c9f56caeb7cefcc74bf169ed6d46adda4fd204ef633311376b3cc3f7193d68 WHIRLPOOL 88873f0aff5d9d811525bff49fff15a985c430f182e53544138515f027406e43a70d670a45deb317e594d5e4afee1fa37b93da570d205a1bece4e4cbafbfe7f1
diff --git a/sci-libs/dcmtk/dcmtk-3.6.0.ebuild b/sci-libs/dcmtk/dcmtk-3.6.0.ebuild
index afc167d9d7e3..986977e0200c 100644
--- a/sci-libs/dcmtk/dcmtk-3.6.0.ebuild
+++ b/sci-libs/dcmtk/dcmtk-3.6.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI="5"
@@ -26,17 +26,19 @@ DEPEND="${RDEPEND}
doc? ( app-doc/doxygen )
media-gfx/graphviz"
-src_prepare() {
+PATCHES=(
+ "${FILESDIR}"/01_fix_perl_script_path.patch
+ "${FILESDIR}"/02_dcmtk_3.6.0-1.patch
+ "${FILESDIR}"/04_nostrip.patch
+ "${FILESDIR}"/dcmtk_version_number.patch
+ "${FILESDIR}"/png_tiff.patch
+ "${FILESDIR}"/regression_stacksequenceisodd.patch
+ "${FILESDIR}"/${PN}-asneeded.patch
+ "${FILESDIR}"/${PN}-gcc472-error.patch
+)
- epatch \
- "${FILESDIR}"/01_fix_perl_script_path.patch \
- "${FILESDIR}"/02_dcmtk_3.6.0-1.patch \
- "${FILESDIR}"/04_nostrip.patch \
- "${FILESDIR}"/dcmtk_version_number.patch \
- "${FILESDIR}"/png_tiff.patch \
- "${FILESDIR}"/regression_stacksequenceisodd.patch \
- "${FILESDIR}"/${PN}-asneeded.patch \
- "${FILESDIR}"/${PN}-gcc472-error.patch
+src_prepare() {
+ cmake-utils_src_prepare
sed -e "s:share/doc/dcmtk:&-${PV}:" \
-e "s:DIR \"/:DIR \"/usr/:" \
@@ -56,7 +58,7 @@ src_prepare() {
}
src_configure() {
- mycmakeargs="${mycmakeargs}
+ local mycmakeargs="${mycmakeargs}
-DBUILD_SHARED_LIBS=ON
-DCMAKE_INSTALL_PREFIX=/
$(cmake-utils_use tiff DCMTK_WITH_TIFF)
diff --git a/sci-libs/geos/Manifest b/sci-libs/geos/Manifest
index d33ac62d91e8..9970ca702ca4 100644
--- a/sci-libs/geos/Manifest
+++ b/sci-libs/geos/Manifest
@@ -1,12 +1,8 @@
AUX 3.4.2-solaris-isnan.patch 575 SHA256 88221c77c0ab08a4c000cede7528ebacc6ec1535ca00a9bcb0a01f11853cad39 SHA512 efa2730f178814e8d98318347e7a8313327679a5c861ef2a844ce821c5854f4dd56e0cc2c52fa5866fb4214b0d9aa8614b1f1ebaa62f0427e69221a93106aa45 WHIRLPOOL bab6b200b942bb83d8a9a298f9c658b48a35b4abd308c6eb77f43359424de029fe2387ab74030b2a5b440a38202e300b0971895535d11b3a8b9158ecf9fc4b42
-AUX geos-3.5.0-autoconf-detect-isnan.patch 743 SHA256 b436c8540c9fa5b517f1fa97b6611fafef44ce03cee115d47d934e19190538cb SHA512 319b853ae42a9ba5ead8854dc2e4005ab1bc644f71f1f05fdbc469e2179a63653226423be0623dcb4499c58a9b1831b2ae7f8f3e8026e1ebe60cc1dde86c8288 WHIRLPOOL d660d6f3cc21a1a1eade93adfef8fef5b9249e420583e33eb8f92807692c2f73a169e40b1418641702797f2dba0de210d49396cb9001b4d5d4bb457db42ca311
-AUX geos-3.5.0-phpconfig-path.patch 1199 SHA256 82f128367477f66d88b9cfb0989d60e18097e82fece4478661c628b05e749bd2 SHA512 7b8b70904b86ad5b677cf3ea43d31e89fcf4bfeab429c8d71e6a96924f1500684c992e3a23dd4b993c9d36e6aa50c38158526c6a78e5e802968b795efcbc9c54 WHIRLPOOL af51b47ce428b43e3fa1dd22daab6d5083a084fd73560d4f2b6241106f84ac115c2de1009a9b209013e60c6aa4205d620c8546dd22e0d0d5b6ee017ee8e4e7cd
-AUX geos-3.5.0-std-isnan.patch 799 SHA256 c09fa85543e55ea401994bbeb1863224702a3f891aac0d5d35edfed649d045bf SHA512 786fd52721378481bed7d040d4e3f7ab4be3090982e82839f8993ea63d09ff03ec5df9edb776da0afb43a94c745a52af34517cc264b47f1f57278292bc65e1dc WHIRLPOOL 6d40855746f3a078e76ef48f95e5bbbe1b2b8c48804968059f2595cad25f8f2467b18c70f4339b444df6c168acb290a25d3a137bd10baf575b39ffd5fc2b34ac
-DIST geos-3.5.0.tar.bz2 1949397 SHA256 49982b23bcfa64a53333dab136b82e25354edeb806e5a2e2f5b8aa98b1d0ae02 SHA512 cd9c008c19213eb90959f950b03958e6abd9c22d83e6eb5f5a9020263ad8b0045dd5c5af60417c548fc130a57756ae1ef706710086cc277498b9ba6a0a6256b7 WHIRLPOOL f7530e1dc6b99b4ad83d9a01c44b8e6256e118f7615a473d666b00549296df00ca3c86d7ab4d0ae717a3b329b3a9ecac587bc475ee51cbd7e436922860d00ab9
DIST geos-3.6.1.tar.bz2 1833434 SHA256 4a2e4e3a7a09a7cfda3211d0f4a235d9fd3176ddf64bd8db14b4ead266189fc5 SHA512 8b28e7706567375ca02ae5f5dbebf0870e8fed8ea430596a3637e5c975e72bc0f3c16c31b052f154042dd029c54130325a8d44de95c3458f5da024a97d3cfaf9 WHIRLPOOL bda0bb3b77c7c815e0be613f9af8f544fa4410029033851564bc83a912d5d7bfabaeb5d8d3dc61ebebfb482bdc64ea3cc09b395041b22cf419662beafdfec073
-EBUILD geos-3.5.0-r2.ebuild 3242 SHA256 5a320a59c5040ef7a392cd73b28a7a5596d2337e68ffc7cae0f0e54907a9d5ab SHA512 4f02a441d70c0d9e5aedd880acfe1ccb6a58d83ff2bbae5b0b3e2ed1a748c002849745f8ab13720932daf64029d2436a8ba7b760ce0821fc4e6541b1bdfb15dc WHIRLPOOL 6db7d79360d52e39341c9c9790ef9b96aa72cf6b5bb5518e089ae897d1b25514331bc161611bbbcf3c2c0582a4d3231b91cfb5a1de979bdb967d10035af1ae24
-EBUILD geos-3.5.0.ebuild 1368 SHA256 87d56fb001bc57043fd67852c1e25328f178141b76c5f32142b253cb7897d501 SHA512 24854d33d0d1b86d47c7bc59e46a1f528298bd200de87fa49eafe514f3f2b6791f3e689f60acf8a106fd6fcbebb0852e6c60da1f42fceeb86e14208297247b92 WHIRLPOOL fd8d186254a11086ea8a55d86f666ab046bf4533464c12a547bc56b5b86d9f1e7ee8dbaac04d403868a7ad48c2b2b7a72dae2829f8569c3fe384d1fef5efaf02
+DIST geos-3.6.2.tar.bz2 2030705 SHA256 045a13df84d605a866602f6020fc6cbf8bf4c42fb50de237a08926e1d7d7652a SHA512 515d8700b8a28282678e481faee355e3a43d7b70160472a63335b8d7225d9ba10437be782378f18f31a15288118126d411a2d862f01ce35d27c96f6bc0a73016 WHIRLPOOL 137061802daf29c94951ffe651e284064c66049fed02488720bb255094ab8ba8093fcf9fca568acada94714493cd9d740898ae2c4e5fe2610a9c88255e8c88f6
EBUILD geos-3.6.1.ebuild 1326 SHA256 fa599d3ded7e10ecf1ff2e2f7c9efda3fa03aaf6a5dde06e40f9f0655edc0b48 SHA512 98a71dde912af00e31687741a6d327f3a03a69c659a02b9b98ff554dfb8c6765518ff139d40f5c890a033079410072c6a6d4ff09e8825e69f83efad2f89f80a0 WHIRLPOOL 83c1d2f0769908736fe2c52e59462427a812d42ef658747090c0f9f468cb597e5b44045e134e1da1cb249d6a27be5d2f0718fc417f5d12581192b4c8cb2e120e
+EBUILD geos-3.6.2.ebuild 1331 SHA256 ca598d4575f2e5f76a33d3bc2ed86b4bfe223fa3715bc42135a5d28c9e2b5dbd SHA512 b986a6be9f6c30cbec352330078505da13cec601b2bc56df8f0b833ad2d6e52553297869d72138cb4184800eb96d6686437574b40b02632c8d1cd6f649fe0358 WHIRLPOOL 4482b3281630e96fbc0a59944cbb2675b2f576449d551d56f70af8a32c3699478825fd0c1be5e24818dec00ec077202dd929de2d6c78c04986ad9b91aa6f3aa0
MISC ChangeLog 5536 SHA256 24394cccb5cf4cc855812942aa678ebf010b9fac0a8b093c7e4e3c2363b3971c SHA512 0dbe752169b32d4a9b7d2e756e428fc27b0f9d655e20b8efcf3c55f8d65ab8c479504f76360497cfd6e850d96a1190d52c9a5d3830af61513346dd4f46954609 WHIRLPOOL a06545757cc8103cae0ff70d8b605baff2899f16dd07acf9e6f883f61479165e66a6f1fde76653d688e8c21728ab76c2718a847971b8b154b2a8aaa0179befa4
MISC ChangeLog-2015 14068 SHA256 908303607639c8d0e2bde59425a143b0b8404649bc7ad14c3a36371e45503e5e SHA512 0ee366bcf967fab536d68745b08854814c4d8d4264ef561fa5cb3a10dadab0591687bf7407c136b4fe7de7a39068513b3df1a7d220b3057ac38353a364cef010 WHIRLPOOL 3070041c944238d3cfefd61a9b2c21d23e66ac358dedffe5046feb3b61e2f87f79997bcaa8cedc5666e7143a8eae173279b0bdcf8d8f59cabba23ffeb080bb7d
MISC metadata.xml 941 SHA256 8a7e7a99a417392ddd6d95acc57b5c339f5c511dc48ea984f4a171cfce982489 SHA512 cf93ad12e2e2d23ce6b454ae1032e8362beccd952a0f431780467c2985c07fa284edcb10a5d7b61d098a70c097f091a7f771be5a1650c1ed431ba249f73e5b1c WHIRLPOOL 08c68f1b72095471e86966fb518da6d6717b9605339c6f60fece23b402e017a7a7160af7bcb73b71d1987e3ea177ddee875bb2920727adc7d096879904c17958
diff --git a/sci-libs/geos/files/geos-3.5.0-autoconf-detect-isnan.patch b/sci-libs/geos/files/geos-3.5.0-autoconf-detect-isnan.patch
deleted file mode 100644
index 79e319da493e..000000000000
--- a/sci-libs/geos/files/geos-3.5.0-autoconf-detect-isnan.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-From edbeee650287a4a36837e090eafed90a760bad83 Mon Sep 17 00:00:00 2001
-From: Sandro Santilli <strk@keybit.net>
-Date: Mon, 7 Mar 2016 10:21:33 +0000
-Subject: [PATCH] Look for isnan in std:: namespace
-
-Tested with gcc 4.8.4
-
-git-svn-id: http://svn.osgeo.org/geos/trunk@4169 5242fede-7e19-0410-aef8-94bd7d2200fb
----
- configure.ac | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/configure.ac b/configure.ac
-index 7fdc579..8976a6a 100644
---- a/configure.ac
-+++ b/configure.ac
-@@ -197,7 +197,7 @@ dnl of isnan().
- AC_LANG_PUSH([C++])
- AC_CACHE_CHECK([for isnan], ac_cv_isnan,
- [AC_TRY_LINK([#include <cmath>],
-- [double x; int y; y = isnan(x);],
-+ [double x; int y; y = std::isnan(x);],
- ac_cv_isnan=yes,
- ac_cv_isnan=no
- )])
diff --git a/sci-libs/geos/files/geos-3.5.0-phpconfig-path.patch b/sci-libs/geos/files/geos-3.5.0-phpconfig-path.patch
deleted file mode 100644
index b44eb9da9ea1..000000000000
--- a/sci-libs/geos/files/geos-3.5.0-phpconfig-path.patch
+++ /dev/null
@@ -1,29 +0,0 @@
-diff --git a/php/Makefile.am b/php/Makefile.am
-index 5b50c0f..fad05c0 100644
---- a/php/Makefile.am
-+++ b/php/Makefile.am
-@@ -56,7 +56,7 @@ geos_la_CPPFLAGS = $(AM_CPPFLAGS) \
- -I$(top_srcdir)/include
-
- install: all
-- $(INSTALL) -d "$(DESTDIR)"/`$(PHP_CONFIG) --extension-dir`
-- $(INSTALL) -m 755 .libs/geos.so "$(DESTDIR)"/`php-config --extension-dir`
-+ $(INSTALL) -d "$(DESTDIR)"`$(PHP_CONFIG) --extension-dir`
-+ $(INSTALL) -m 755 .libs/geos.so "$(DESTDIR)"`$(PHP_CONFIG) --extension-dir`
-
- endif
-diff --git a/php/Makefile.in b/php/Makefile.in
-index d8c343e..9485d0d 100644
---- a/php/Makefile.in
-+++ b/php/Makefile.in
-@@ -877,8 +877,8 @@ uninstall-am: uninstall-pkglibLTLIBRARIES
-
-
- @ENABLE_PHP_TRUE@install: all
--@ENABLE_PHP_TRUE@ $(INSTALL) -d "$(DESTDIR)"/`$(PHP_CONFIG) --extension-dir`
--@ENABLE_PHP_TRUE@ $(INSTALL) -m 755 .libs/geos.so "$(DESTDIR)"/`php-config --extension-dir`
-+@ENABLE_PHP_TRUE@ $(INSTALL) -d "$(DESTDIR)"`$(PHP_CONFIG) --extension-dir`
-+@ENABLE_PHP_TRUE@ $(INSTALL) -m 755 .libs/geos.so "$(DESTDIR)"`$(PHP_CONFIG) --extension-dir`
-
- # Tell versions [3.59,3.63) of GNU make to not export all variables.
- # Otherwise a system limit (for SysV at least) may be exceeded.
diff --git a/sci-libs/geos/files/geos-3.5.0-std-isnan.patch b/sci-libs/geos/files/geos-3.5.0-std-isnan.patch
deleted file mode 100644
index c2b6a996afcd..000000000000
--- a/sci-libs/geos/files/geos-3.5.0-std-isnan.patch
+++ /dev/null
@@ -1,26 +0,0 @@
-From a9bb3ed34e71f5f9d1d1b0bc3044555a0b3b932c Mon Sep 17 00:00:00 2001
-From: Sandro Santilli <strk@keybit.net>
-Date: Thu, 14 Jul 2016 10:38:35 +0000
-Subject: [PATCH] Fully qualify isnan call when HAVE_ISNAN is defined
-
-Fixes build with GCC-5.3.0 and higher.
-Closes #784
-
-git-svn-id: http://svn.osgeo.org/geos/trunk@4224 5242fede-7e19-0410-aef8-94bd7d2200fb
----
- include/geos/platform.h.in | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/include/geos/platform.h.in b/include/geos/platform.h.in
-index d8d4558..c3bc9c8 100644
---- a/include/geos/platform.h.in
-+++ b/include/geos/platform.h.in
-@@ -86,7 +86,7 @@ extern "C"
- #endif
-
- #if defined(HAVE_ISNAN)
--# define ISNAN(x) (isnan(x))
-+# define ISNAN(x) (std::isnan(x))
- #else
- # if defined(_MSC_VER)
- # define ISNAN(x) _isnan(x)
diff --git a/sci-libs/geos/geos-3.5.0-r2.ebuild b/sci-libs/geos/geos-3.5.0-r2.ebuild
deleted file mode 100644
index 986fa56bbe03..000000000000
--- a/sci-libs/geos/geos-3.5.0-r2.ebuild
+++ /dev/null
@@ -1,135 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-USE_PHP="php5-4 php5-5 php5-6"
-PHP_EXT_NAME="geos"
-PHP_EXT_OPTIONAL_USE="php"
-PHP_EXT_SKIP_PHPIZE="yes"
-
-inherit php-ext-source-r2 autotools eutils python-single-r1
-
-DESCRIPTION="Geometry engine library for Geographic Information Systems"
-HOMEPAGE="http://trac.osgeo.org/geos/"
-SRC_URI="http://download.osgeo.org/geos/${P}.tar.bz2"
-
-LICENSE="LGPL-2.1"
-SLOT="0"
-KEYWORDS="~amd64 ~arm ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~sparc64-solaris ~x64-solaris"
-IUSE="doc php python ruby static-libs"
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
-
-RDEPEND="
- python? ( ${PYTHON_DEPS} )
- ruby? ( dev-lang/ruby:* )
-"
-DEPEND="${RDEPEND}
- doc? ( app-doc/doxygen )
- php? (
- dev-lang/swig
- app-admin/chrpath
- )
- python? ( dev-lang/swig )
- ruby? ( dev-lang/swig )
-"
-
-PATCHES=(
- "${FILESDIR}"/3.4.2-solaris-isnan.patch
- "${FILESDIR}"/${PN}-3.5.0-std-isnan.patch
- "${FILESDIR}"/${PN}-3.5.0-autoconf-detect-isnan.patch
- "${FILESDIR}"/${P}-phpconfig-path.patch
-)
-
-pkg_setup() {
- use python && python-single-r1_pkg_setup
-}
-
-# Call default here to override the php-ext-source-r2_src_unpack
-src_unpack() {
- default
-}
-
-src_prepare() {
- epatch "${PATCHES[@]}"
- eautoreconf
- echo "#!${EPREFIX}/bin/bash" > py-compile
- if use php; then
- local php_slot
- for php_slot in $(php_get_slots); do
- cp -a "${S}" "${WORKDIR}/${php_slot}" || die
- done
- fi
-}
-
-src_configure() {
- # bug 576436 - does not support PHP-7.0
- local PHP_CONFIG
- local php_libdir="${EROOT}usr/$(get_libdir)"
-
- econf \
- $(use_enable python) \
- $(use_enable ruby) \
- --disable-php \
- $(use_enable static-libs static)
-
- if use php; then
- local php_slot
- for php_slot in $(php_get_slots); do
- PHP_CONFIG="${php_libdir}/${php_slot}/bin/php-config"
- [[ -e "${PHP_CONFIG}" ]] && export PHP_CONFIG
- pushd "${WORKDIR}/${php_slot}" > /dev/null || die
- econf \
- --disable-python \
- --disable-ruby \
- --enable-php \
- --disable-static
- popd > /dev/null || die
- done
- fi
-}
-
-src_compile() {
- emake
- if use php; then
- local php_slot
- for php_slot in $(php_get_slots); do
- pushd "${WORKDIR}/${php_slot}/php" > /dev/null || die
- rm -r ../capi || die
- ln -sfr "${S}/capi" ../capi
- emake
- popd > /dev/null || die
- done
- fi
-
- use doc && emake -C "${S}/doc" doxygen-html
-}
-
-src_install() {
- emake DESTDIR="${D}" install
-
- use doc && dohtml -r doc/doxygen_docs/html/*
- use python && python_optimize "${D}$(python_get_sitedir)"/geos/
-
- if use php; then
- local php_slot
- local libpath
- local php_libdir="${EROOT}usr/$(get_libdir)"
-
- for php_slot in $(php_get_slots); do
- pushd "${WORKDIR}/${php_slot}/php" > /dev/null || die
- emake DESTDIR="${D}" install
- popd > /dev/null || die
- # The libpath will vary by slot as the extension-dir is tied to the API date
- libpath="lib/extensions/$(${php_libdir}/${php_slot}/bin/php-config --extension-dir | grep -o '[^/]*$')/geos.so"
- local lib="${D}/usr/$(get_libdir)/${php_slot}/${libpath}"
- if [[ -e "${lib}" ]]; then
- chrpath -d ${lib} || die "Failed cleaning RPATH on '${lib}'"
- fi
- done
- fi
-
- prune_libtool_files
-}
diff --git a/sci-libs/geos/geos-3.5.0.ebuild b/sci-libs/geos/geos-3.6.2.ebuild
index 60c7caacb525..57fa6fac0d90 100644
--- a/sci-libs/geos/geos-3.5.0.ebuild
+++ b/sci-libs/geos/geos-3.6.2.ebuild
@@ -1,10 +1,11 @@
# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-EAPI="5"
+EAPI=6
PYTHON_COMPAT=( python2_7 )
-inherit autotools eutils python-single-r1
+
+inherit python-single-r1
DESCRIPTION="Geometry engine library for Geographic Information Systems"
HOMEPAGE="http://trac.osgeo.org/geos/"
@@ -12,25 +13,28 @@ SRC_URI="http://download.osgeo.org/geos/${P}.tar.bz2"
LICENSE="LGPL-2.1"
SLOT="0"
-KEYWORDS="amd64 arm ppc ppc64 x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~sparc64-solaris ~x64-solaris"
-IUSE="doc php python ruby static-libs"
+KEYWORDS="~amd64 ~arm ~arm64 ~ia64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~sparc64-solaris ~x64-solaris"
+IUSE="doc python ruby static-libs"
REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
RDEPEND="
- php? ( >=dev-lang/php-5.3:* )
python? ( ${PYTHON_DEPS} )
ruby? ( dev-lang/ruby:* )
"
DEPEND="${RDEPEND}
doc? ( app-doc/doxygen )
- php? ( dev-lang/swig )
- python? ( dev-lang/swig )
- ruby? ( dev-lang/swig )
+ python? ( dev-lang/swig:0 )
+ ruby? ( dev-lang/swig:0 )
"
+PATCHES=( "${FILESDIR}"/3.4.2-solaris-isnan.patch )
+
+pkg_setup() {
+ use python && python-single-r1_pkg_setup
+}
+
src_prepare() {
- epatch "${FILESDIR}"/3.4.2-solaris-isnan.patch
- eautoreconf
+ default
echo "#!${EPREFIX}/bin/bash" > py-compile
}
@@ -38,21 +42,18 @@ src_configure() {
econf \
$(use_enable python) \
$(use_enable ruby) \
- $(use_enable php) \
$(use_enable static-libs static)
}
src_compile() {
- emake
-
+ default
use doc && emake -C "${S}/doc" doxygen-html
}
src_install() {
- emake DESTDIR="${D}" install
-
- use doc && dohtml -r doc/doxygen_docs/html/*
+ use doc && HTML_DOCS=( doc/doxygen_docs/html/. )
+ default
use python && python_optimize "${D}$(python_get_sitedir)"/geos/
- find "${ED}" -name '*.la' -exec rm -f {} +
+ find "${D}" -name '*.la' -delete || die
}
diff --git a/sci-libs/itpp/Manifest b/sci-libs/itpp/Manifest
index 81938c85f123..7201b8caa704 100644
--- a/sci-libs/itpp/Manifest
+++ b/sci-libs/itpp/Manifest
@@ -1,5 +1,5 @@
DIST itpp-4.3.1.tar.bz2 1289687 SHA256 50717621c5dfb5ed22f8492f8af32b17776e6e06641dfe3a3a8f82c8d353b877 SHA512 b46d048fa7f33e80d2291a5e38e205c159791ea200f92c70d69e8ad8447ac2f0c847fece566a99af739853a1643cb16e226b4200c8bf115417f324e6d38c66bd WHIRLPOOL e4791babcdb9e874a29b8f628af000e93fc316a7da0199713e7b840317d1b1109e4350c7582a3f88db3fe8be03ff8ee93b40712b77f61faa155acc668f39c0e0
-EBUILD itpp-4.3.1-r1.ebuild 1313 SHA256 34f9f091e800f9f935963a581cd3574c5fbab9a72cf89f6e761554a401a82e09 SHA512 09e1b8bc70c37b7ea1bd92a280f9b2b880c0fb0b8cb5d55f806b3886ac1ed1923c74580203296261fb99410173a9df7b9c3f755c0df98b4367bc057adea0f464 WHIRLPOOL 90c84e1356f45dab29d6a55f72e885d08d8a721fe6b0300e614c12a17b71ebeb4245c66d52f4b0a2fbe25ee40078a9ae5c237f7863946ee10bd2964429d8521e
+EBUILD itpp-4.3.1-r1.ebuild 1341 SHA256 929f25966f8e9628c992c396c9679a88cb916d273ad5839abf2ca91578aa923f SHA512 96c292cb3d6bd26c6a1396e74ce08fdc1d5bbfc9c75d2311686d62d12f28720cb74f17a616b687cea3f19d8c5f67565e3ccac9ce3fd45eb5bfa15a081bf99f47 WHIRLPOOL cdd68785f36d4c0b35386fe453d85827454a47cfbfae18f4d914507a770154f0e6a4a58e7bafd4db290681eb5e6d2d12f542355187a8f82c6fa98227c40bddd0
MISC ChangeLog 4108 SHA256 9642be080c217aaaf5397c64a84eddd33af6a38783f48c46c99f6fcfb8755d6e SHA512 32bb71df0a1940e8602c4ae93c76a80b7b5a9cf3b786935be453a1ec115793433b45372fd696f0228452b7760552ab6a700ffc07be53ff7fc36e2e91e97768d0 WHIRLPOOL 85c8725ac70cf7d8848f462bf0c28e55fe171ba1ee4920f80be7e8300e5858a42259eda7fe578f22254ff9f9f7f705498234564c3510df5a4d6ca5bca7e63905
MISC ChangeLog-2015 17860 SHA256 385812077fe6a13c347c8baf0dbcb991f14049c35f8d7b1e813a65d5c8df5a67 SHA512 1d8b51cbfdba67d4266cddb215490ac54c62361d61ac48e350472a67c37d6c00ee0ea8a594be0c43c18ed986162f256bba77b0f3112127506cb0f2c78a059d81 WHIRLPOOL e527c9bd5dbef09915c82487828f7e2321222c3aa0ca20200b4c9b480507769d9faeed7d7d2ee0b515f9839225f5d83d08b560b205ff5629d29892b37783a221
MISC metadata.xml 778 SHA256 e0533a86039e784b8b9c9106d848818abe7a352c8285337701c3bafcbfe9c92b SHA512 daef37adb619d49abcb70482f581cbf3492f7fc352f0414f5da2f77ca114b45816fd20466e70028030de3f478ca2ebfb2ff576cb231f860be09e5918931860a8 WHIRLPOOL de8db3bf7b2ad6f6521a743d9bf8b2fefdcbb6219518c7fa9d6e2213ac5e8c380d6944ff24259b41654ccd3f9fcde2bebf66ba22842cc2aa59def75a4a6e8b43
diff --git a/sci-libs/itpp/itpp-4.3.1-r1.ebuild b/sci-libs/itpp/itpp-4.3.1-r1.ebuild
index dab233c0d4cd..3abddec3041b 100644
--- a/sci-libs/itpp/itpp-4.3.1-r1.ebuild
+++ b/sci-libs/itpp/itpp-4.3.1-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -22,9 +22,11 @@ DEPEND="${RDEPEND}
virtual/pkgconfig
doc? ( app-doc/doxygen virtual/latex-base )"
-DOCS=(ChangeLog NEWS AUTHORS README)
+DOCS=( ChangeLog NEWS AUTHORS README )
src_prepare() {
+ cmake-utils_src_prepare
+
# gentoo redefines the CMAKE_BUILD_TYPE
sed -i \
-e 's/CMAKE_BUILD_TYPE STREQUAL Release/NOT CMAKE_BUILD_TYPE STREQUAL Debug/' \
diff --git a/sci-libs/lapack-reference/Manifest b/sci-libs/lapack-reference/Manifest
index 8c4643f981e4..762d2d303bdc 100644
--- a/sci-libs/lapack-reference/Manifest
+++ b/sci-libs/lapack-reference/Manifest
@@ -8,8 +8,8 @@ DIST lapack-3.6.0.tgz 6792324 SHA256 a9a0082c918fe14e377bbd570057616768dca76cbdc
DIST lapack-3.7.0.tgz 7359812 SHA256 ed967e4307e986474ab02eb810eed1d1adc73f5e1e3bc78fb009f6fe766db3be SHA512 e4f4c7d0ba8a096eeb813160c6dbcdd535647df6b2ad5beac9181908158956b31d1a9554ec9b9836fd44fe7404c1f377b297cbb20d744f20d70e357fd246c91b WHIRLPOOL d536508015e081395bda83b84bf4e5b1d6e8e517ea38f6afcaf40e96d892b26b8b1034954d5cd79cce5033d6653e178b5d27a46deecfa7466cd0bdaafcf9f18f
DIST lapack-reference-3.2.1-autotools.patch.bz2 13338 SHA256 de2ab4ea9723f549c77b38d932e5ddb55b7b5583b0050e527505210460dcdf76 SHA512 957e8c7646a0d6ade9c0dfdaf2aa665a01f932dfda376ba1db164106fb174793e6504cdbed7daf158f23bb69502937963cb2e2d45ac720980d3832f6fc0fedbd WHIRLPOOL 8872222a124cd8593c8441034b6fd47463193e03bdebafc8b2790ebc73f49eb811762dc9cd98949bda0af7869f9d12b9ebbfc23457b5393d88c00a013c4f419d
EBUILD lapack-reference-3.2.1-r4.ebuild 2856 SHA256 45b3687155b0ab0a79b4827583baf9ffb5576d78932c51737f7c890bb169e2ff SHA512 3ef5329596912cc97135ddfe6f086159ac92466970ea2a8d76bed523af6a608db506b02b92743dd728e01e9e1c1e266c8d623cf5177ae2738df7ad2ecf81f72d WHIRLPOOL 867cce334ff05e3bc9489c3d26713e3c6c6d61f1cc79770ac8854fcc91fd95964ecf066749f3d6bd026905b991912e8f9ff69390e628274435e1ff2334f69cc6
-EBUILD lapack-reference-3.6.0.ebuild 2657 SHA256 7523511a20f73ceae38f1ec029027fa7de9de4eec9e05b43e727a87dba097446 SHA512 98ce072e5123bbd76a7aa99ac65810c83820f3ed57e3f0087c8c7117d94a84693f85bf981eaa6c5d6bb0decb69341ff13dd00f5c7ea2ed30ce4ba8a447dce159 WHIRLPOOL a2ac90e5fea6db523d58d9ffc9263087ff3d1ef126cd7c1d6fc7713d5973b5f7e1036e0714bd1a706b1ae68189b779a91e1da3e5d98f08f25280a61048b6adac
-EBUILD lapack-reference-3.7.0.ebuild 2895 SHA256 42ba8a45011d4206ab00e3b52a69ae6b984e9ed8a08d76bd4a40cedb12310104 SHA512 4c11e7f62f8ac9803f0654b605c18cc36dadaec5060e16fd342a4b4369962b0e3951852377cde33b3171abfbca902a574fdeedbeeedf1b62cede3732106ff58a WHIRLPOOL 7040c28640acfd796a4f3e0fdee38fe8f77994b2a6edcbbd4f022c8a0dbc38341751df9ed1d1b1e548c4e2171ec06318aa5dc85729e38eb7eec502449ce3c18e
+EBUILD lapack-reference-3.6.0.ebuild 2644 SHA256 79287371a3a9c39f31ef3acd4fff8b845d311c68f5cab5a0a9abf0f20424dabc SHA512 b4df9f1a368314b55ea5bdb44324089729262e7a47dd6105d93ef58acfb60fc369252c20bdf9a5436d4f08be2fd5af6929259b9f7b03bcffbaa2ff5a461f7bfd WHIRLPOOL f2618fd0db1558c2f1cb0da60834ade5c2a5df8fd7f6159ed1011c9601bbdd287adf5f3e609f81aa0bd3e542c569c9ca8672e5d850a6cd9359afeb82099dbf24
+EBUILD lapack-reference-3.7.0.ebuild 2882 SHA256 c92c3671d5c05c83d81bc4518f944e25f4ae457e9e8386527b442b08ac15913c SHA512 b69c879e1fb12c2c9e90f97cea99b7a0711e95ad08b7ab139be5357396179f3942f5dd796ba10fc34bd44ca8015b2f98db8ec59d9d3ee730a3ca750a230b1336 WHIRLPOOL 2e74df150defcfc974c4548ad4bf258687db58a135e51e47c3b702e18155616b87287c5668787253137694082788445fb6365a5ca2f3ed1dc1a3676465c96aa6
MISC ChangeLog 6240 SHA256 85bab95e7d7078dd90cc171f8825e7bcb151e204b4b305c8fdfe686e63495264 SHA512 88b0acad870b54f186a1e1668d8c423d42161eaf9b5f3b8e30a9a25d065c167c44291b5b8536fdb06ffca57256c7df16e23c1ace9c7be43dfc428ded98cbef94 WHIRLPOOL 1ea8a08b639ef5c5b48c91f66076860db62c53f09537f2a7c2a2fe3db58d7da9c478f123f119cde8de60573de4e2f97d13429569394ac5dc2ea7c76a949bc4db
MISC ChangeLog-2015 12731 SHA256 3a1e145c6a0f03ae3720399fbdec93ea8ba1800245d549974f09e82a345dcf87 SHA512 d0e2b96821d2ce088ddace0faa8fc8ca12385dfd42f79489f343574bdf93a7719efb2d627e221913cb5887ec1fba015233e6350c7a2f5b8d8238caf0bc08f504 WHIRLPOOL f12fafba001b86ba131724fd7e54d7f2bc4661722df93d9efc26363c27e3a3bc56dc4da0ffcc3297b237971a8e25e3d0423924169607a9e26b79a559a02c6218
MISC metadata.xml 779 SHA256 830310a4b926b4ca067b08b42923d413de1150d3dd1dc974ddbd0b157b065182 SHA512 a72591749a3ea6ac49ce3a20d6934042c54e0b1639d00d585bdcc88cd9425d31135d8acc4ee33856f3933cc2518e5c7354d6debc20bbcc7b701cd6978f474e6f WHIRLPOOL c3f6b63c6e1c0f0a6b3424c6bcffe0f05f0b4e4db21f257dd0ff23cd600709f867ad5b5ec8bae5ae8835cb0b9ad378e9898b8e4be997fc66197eebce3d181a25
diff --git a/sci-libs/lapack-reference/lapack-reference-3.6.0.ebuild b/sci-libs/lapack-reference/lapack-reference-3.6.0.ebuild
index f7f204af0676..e3312e7d791d 100644
--- a/sci-libs/lapack-reference/lapack-reference-3.6.0.ebuild
+++ b/sci-libs/lapack-reference/lapack-reference-3.6.0.ebuild
@@ -23,9 +23,7 @@ S="${WORKDIR}/lapack-${PV}"
PATCHES=( "${FILESDIR}/${P}-fix-build-system.patch" )
src_prepare() {
- epatch "${PATCHES[@]}"
-
- eapply_user
+ cmake-utils_src_prepare
ESELECT_PROF=reference
diff --git a/sci-libs/lapack-reference/lapack-reference-3.7.0.ebuild b/sci-libs/lapack-reference/lapack-reference-3.7.0.ebuild
index 2bc7edc7b4ff..e72c51c93e90 100644
--- a/sci-libs/lapack-reference/lapack-reference-3.7.0.ebuild
+++ b/sci-libs/lapack-reference/lapack-reference-3.7.0.ebuild
@@ -23,9 +23,7 @@ S="${WORKDIR}/lapack-${PV}"
PATCHES=( "${FILESDIR}/${P}-fix-build-system.patch" )
src_prepare() {
- epatch "${PATCHES[@]}"
-
- eapply_user
+ cmake-utils_src_prepare
ESELECT_PROF=reference
diff --git a/sci-libs/libgeodecomp/Manifest b/sci-libs/libgeodecomp/Manifest
index 910acbd2cb89..00be2313ba45 100644
--- a/sci-libs/libgeodecomp/Manifest
+++ b/sci-libs/libgeodecomp/Manifest
@@ -1,6 +1,6 @@
AUX libflatarray.patch 528 SHA256 5858f66ba36289dd0247a70ed2ab26351137f06463ce2331a56a09107a202f12 SHA512 e3b195723999285fa14702e01497485f55e8523883951db16eb883220cb636d3f20f3df776b1a0dff70da221dfd7483a032e08b2996e94fd642fa175f69cc627 WHIRLPOOL d797166bcdbaf987b58288f29ca1f61c7106b6f9a05158a9e2ae7f8dd0a2bc62b0242bddd20a5795d5e4416ea64dcc35cde3881e43b095d4285df18686fe275e
DIST libgeodecomp-0.3.1.tar.bz2 740341 SHA256 3c49a238472a82be3a6e2411a20bda85672aac01d4a87bb0e63ccbff1385ea64 SHA512 28f0ea04e45cb0a5b81b18efd3e3a011d58c077562f8039ff42e701cc362f86dff90bd505690ec22c8a42e9de1236d5b6c61d288ad4c154289e92700a2a7fcc0 WHIRLPOOL 3827974861556ab84a16e81b8cece2cff4d9e88a1559d99192fa47efd571639b252423038b3b579811c7d57452e94ae96b99f7209e87af46b752b5a193dc9994
-EBUILD libgeodecomp-0.3.1.ebuild 1119 SHA256 f028770acd97561b8aa31dea7c5190740f44eb68f4dc4bec0edb0601c8c6995c SHA512 acfa314b68acbad74a88218c01681ac59b5827c3f93bf3d999ab9d45ccbb8072e7eaf7ed4235223266a720bfc1847251c0ff952cbf2b10ce41fa8089430f7cf0 WHIRLPOOL 65e27d0a9877776202b435db60b00f82765edc2e9c7ac66340557a65971338ed0a03dfea91ee2df30291406e7197a670cb84c830c50c7eeac6788d58aaebc740
+EBUILD libgeodecomp-0.3.1.ebuild 1149 SHA256 64851219cfb839e58af5bcd27a1490f0da760a3abe4c6fe70e31b9f3eeeceaf0 SHA512 25bc38e283677b494026427ef3aacf8b30b0092294fbab5536d5fae383398f2287d7fcd22b580af09f8c696ba5f90472d50bf29e7098ba19e27a1437361a82ae WHIRLPOOL 9b1f752219c20594efc9d2056e1a22c16389aeb72be95b004232311a128f121298e3fbffcb88b187631970b39408ae6a6086825d0f2ca42c17e480075ffae677
MISC ChangeLog 2511 SHA256 5a33add83467c3752615f585c3604cdb166afbd83a3197fa7c26c27fb49a726a SHA512 b1462753b2deeb3b5cd2b033ab3ce5b10758d5bb2ef9f567bd890bee86f7f5ba497a1ecf09fcbd0a710a273639f4a0af971bccb4cf95724f91369b00489fc519 WHIRLPOOL 9ce47507c164e000fe3d5d17f47bd3eb5b2f37cf8f99269e7215bd87df0658836e2958e38980ed4f60f5f6a09e45c9cb04eb803187b60a23c6f83704628c3152
MISC ChangeLog-2015 509 SHA256 5b81c6d04f6a96e40f434b9378b18ae470f4b5c04ea670d2c67a5a1ec6ebb9ab SHA512 8d1de0c428008effa87f19705f81139bf05dd9c8a4605d98de2274f66f98d99355208f2a303dc6cd65c486f4546864a39db358b7265fd59ffa06ba329e9859b8 WHIRLPOOL 224a8b9d224debff3ed4c80867130a4b4424069623e3ab2d222bb8fba2a56f6e9ab5c418d4e62d8e30bba287b85db3119df95943e07d7c2b18d26753342bfd6d
MISC metadata.xml 219 SHA256 b4761abaa4db71355e68ae61325c38990acb1dc6350e3632aa3ee64bfcd69554 SHA512 b6db740071cb706a6dd7ce9e21ec09a11c9d63752f87e700a5cb58fc100befdfc3c6b16b3065e8a8cb9a8cd3bcae6bd162f3bcd3dfcc592e27b5f738adc71007 WHIRLPOOL a65925ed7d4d3e0ac0530648ec4ca60b6487d124e866ec5c20e75ceceab83949a1af4a9431d07b7a7f966f5b390be01eabd454161fab46d1e39d28ba2c85bbea
diff --git a/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild b/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild
index 095cf09eafa5..739df1ee915c 100644
--- a/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild
+++ b/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild
@@ -20,9 +20,11 @@ DEPEND="${RDEPEND}
examples? ( !sys-cluster/mpich2 )"
S="${WORKDIR}/${P}/src"
+PATCHES=( "${FILESDIR}/libflatarray.patch" )
src_prepare() {
- epatch "${FILESDIR}/libflatarray.patch"
+ cmake-utils_src_prepare
+
sed -i 's/libdir=${CMAKE_INSTALL_PREFIX}\/lib/libdir=\/usr\/'$(get_libdir)'/' "${S}/CMakeLists.txt"
sed -i 's/install(TARGETS geodecomp DESTINATION lib)/install(TARGETS geodecomp DESTINATION '$(get_libdir)')/' "${S}/CMakeLists.txt"
diff --git a/sci-libs/mathgl/Manifest b/sci-libs/mathgl/Manifest
index ed1b325d77cf..4ac98817fa66 100644
--- a/sci-libs/mathgl/Manifest
+++ b/sci-libs/mathgl/Manifest
@@ -1,6 +1,6 @@
DIST STIX_font.tgz 2450541 SHA256 6408290fd4a5267637a88507344a8f07b908ce72f46ef93d09e068fedb67e8fe SHA512 c9124ec552074c98f15d6d3572a063598ca6bc598e3e78dcb5a5d57ae3928b5327a1374635f428ea1cefc9e51ee1d1aa9bd6ba9a306429fc6965140251d368b5 WHIRLPOOL 912a280ad550040c961a84fe48cfa2bd9bbcbad6c539b6126b4cbb5f9673ddd4ad5cc9e0d053fcb20cc6c12e1203aeaa3a05cf07360b16e2e7cbb13c0c42cc1e
DIST mathgl-2.3.4.tar.gz 21361705 SHA256 6e93cd9f640c5b6c9dac4ca56854612d4261b4eadd6c8aad6536965195f08c02 SHA512 2ddc45750ae2373c26e199f43b7f9546e0d4540c7b11a1e6280c83632face42f50bcb8276c60b0c2208ca0b6a7506e3fc0d195a8c1aa9e774ba812643b81336d WHIRLPOOL cc7043ec2f6a84999de65ad3a5127564da3563644456d08c280d7f462dedf86e7cd5f28996f43e32300aa30adb730904c6cf6cb8f8e2c434402395af37f3ddc7
-EBUILD mathgl-2.3.4.ebuild 4500 SHA256 a2149155f44811d8b3b5705a2f0dff5b7d7f7a661feb1946fbe127fc1636a26e SHA512 e2b85b2e2680c9f2f57a371ab16b60ad22f153c69ba38cdb733c5f69f5ad2fe988800a21e108b49200ac607ba4402e1a38972314caf9fd2ec2de1562c1c8b93d WHIRLPOOL 01c72d3ef8d4104a4fe17376fa109c2309ef93d2cdb3ae053b783461d5c5732ce08af6ca6b812c7b66e15c08eb943162d01c6f13acc2d95d6a8b44fc468ea6eb
+EBUILD mathgl-2.3.4.ebuild 4516 SHA256 84c9574022334dfe746f70732d103d249ba58a59885408940fc8bb9a027ab717 SHA512 8002a10628ec4e9a1c2e9719f1a730f5bde3e3b41d1b175aab01cd0ff6fb5a5b5203bdba3ef6534ae3fc0bf575143c93ed8b4c4e4868e82de464992842a7957d WHIRLPOOL 6ec293a6d4921e40a52db77fc8a3575ec94fc147facc9e1f48b486adc651e9e8805512a748edfe79806c6a9f7b22b15c14e500519eb9775078a7295471766bc5
MISC ChangeLog 3724 SHA256 d8d15a51c02c59e29ca72b40692a7300420355b2cc43cf2d2be75cb9abd8ea20 SHA512 f5ca1d6d6b5b28d09bf8e0ce78ea9066a0ff4d01a6542621f760930c6851dee520b979ab097b4b583c2222fb99a4b1a19cc5468fcc807c9f87b12ba536cbbf40 WHIRLPOOL fad4bc92bf9ae2bcdc6abefe6153c742c5ae7bbcee2282d0fdc5d17bea930b899bab9304fc2184b8c8bc4a22c425261c5519cd9d73f39667db3796f70ecb65ba
MISC ChangeLog-2015 8347 SHA256 bd3f680544cf9fe5ffbf7c2f069c1441b380d5b226f3842f118c26fdd6b99676 SHA512 05dd03766a6353e086f8d104d98a943d85865025d485be2ce417cd2403efc5a5ba54398475a96a3b0dbb17f86ca17acca82b1d6a9ef5d1afcf16adc85fa5cd82 WHIRLPOOL c88b505e82349536540945e4e83c116458b51e2e485672b70d737d7ce9a8bce4e22c0f5ff4a00f0f608b0385ff1d0f1c0846b1ea46f675069c732f3c861888aa
MISC metadata.xml 913 SHA256 f5a8735160892a9b0d2254a24159dbefea6c37271bc1222e130b44f67b38a997 SHA512 22e4c571f664b538484deabe76cc8182dd624251fe5ead2a0c85c789710a41fb64092fc19e76de7b4aac1fce8c67b9d4c1819e392702fc9dbcad4a98fdfef93f WHIRLPOOL c86c06c45efec819be5368c1203fabe0353d05c04004b92af4be7d3e645ceedd7d9a850c6144f7c794a846b672a90c7f59aaa77b637ad64c31c49729d3cfa799
diff --git a/sci-libs/mathgl/mathgl-2.3.4.ebuild b/sci-libs/mathgl/mathgl-2.3.4.ebuild
index aaacf6c2285e..7ec2be14d829 100644
--- a/sci-libs/mathgl/mathgl-2.3.4.ebuild
+++ b/sci-libs/mathgl/mathgl-2.3.4.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -71,7 +71,7 @@ src_unpack() {
}
src_prepare() {
- default
+ cmake-utils_src_prepare
# fix for location of hdf headers
sed -i -e 's:hdf/::g' src/data_io.cpp || die
diff --git a/sci-libs/neartree/Manifest b/sci-libs/neartree/Manifest
index 3b019e3f4604..1a2a5cc269e4 100644
--- a/sci-libs/neartree/Manifest
+++ b/sci-libs/neartree/Manifest
@@ -1,6 +1,6 @@
AUX CMakeLists.txt 713 SHA256 32ad9057abd52e07eb1d6870467e3903b7c5ba3e99f8a26a05e62d7b9ecb16a1 SHA512 038c8e23c642c6e5f6651b9c2cf29f8764a983294b9add97f9af8ac5d14ee52c1b47afa45791a21e8d783cb0e74801df17a34c1fbb08df1d7dd27ef2b4825b94 WHIRLPOOL 6c7609bf400d471ebf15db701ded2bff6fe30d8fa05bf676a8bb862502ac6e558782967513974a02930c0e45cf053af3f5285752689ed41fc321a2dcc8babf71
DIST neartree-5.1.1.tar.gz 167695 SHA256 b951eb23bb4235ada82cef85b9f129bf74a14e45d992097431e7bfb6bdca6642 SHA512 36f2ab878319153440914325bed67d111dafcac724cbef73d439285f4ad82979b05d2987fa3802c440aa4a037499bf7961ef9b09fa3658364731b5a405854b00 WHIRLPOOL 1b878510835bd5139483f9ba27a61376bed0640af18e4f9f77f729bb880b7d3cac7d4a473954eb58645faeb512c92529fd9a300dde413b6872415d7ada5db2cd
-EBUILD neartree-5.1.1.ebuild 718 SHA256 83c821640b5972ea6a00809647bfc20a29db19b82043c8f5c84b445e12d9a665 SHA512 24378cc8d83400f118dc5f8a56e727b00d3e322051b88db25a317283076f23036e83023c0cc2a2c9807b233c4fbbd380bde95fae29ef6c14229ba91cddeabc8e WHIRLPOOL a7c6d7ae61deaea1f99a4c2fd44694dd3b0efb0dd6708f174c96125de0bcbb9b21b13a42b00ca1733d4f6549d3b4170a682a82664048167ad0e8d705e725cb02
+EBUILD neartree-5.1.1.ebuild 734 SHA256 80cb2cc3dde95d695333496a6c560682b4c9c348b84540772a64a0f3c0f8ab63 SHA512 34041ea452599886cf6de1b0da7e5fa0f2fe472198ddf07eae08741459639b0dda8a0f94c5e058fcdb063ba52e52e4016d6a55f11986ed39c07f048c0f01b279 WHIRLPOOL b43632d189ffcec6034b18bcdf2da630d0b14e8799cc714ca65486a2816950a8d12e097ec9b73370f32965cc60920d153d9ec017ca906054da65241982a1271f
MISC ChangeLog 3062 SHA256 cc41ad05c5c05baaaf3a2a3ebeb401a4488a161fe8d90da6de9d6567ccb0f83c SHA512 c63a287c3f0893382fe960ab37f3d09071bda189f1768d4e288d61d8d5172bfcb120ea6d3fcc3de27a9e84432123bf5302a71b4d7124e7ad90c370fc7a9080e8 WHIRLPOOL 3fbe50d9121f3eadac24902415f86493a024adb7138a14bf0810ce4b84685c59ee10dbd1be495e7904a819173e741664b5f4ecc2c74aad8af331f4da6900e2ef
MISC ChangeLog-2015 4348 SHA256 69aeba5f06adcd1f40441e8c28c6a34ab268a8d32051784620803a5653e05ff7 SHA512 2cc7a18ef6cfa1720abe8d7dc5b9a6c72280bc5be465ed5afbb63e9edb48494edc30062209bedaedb6eee8c8420cbd82a6840c87b0bac654fa47f8473b712522 WHIRLPOOL b5d15b6d2cf260c578679920f6e137014c4d6b6fe907239c27fcc6ced68092459062e1a8cdc40e6338eee60292e68d0754ad1f455179829485e540fde980a975
MISC metadata.xml 331 SHA256 22bcc8c838f6b6cf76aee2c2b742df29e0ddd6f4c359761859c777c830953795 SHA512 3c16cfbd9d2ccac961a78b3d0cd4a0424933f2002a536a25fb192a5347e320282381c92a8f939c1e8c3437ef23a9c843c2b09369a6a6cd6fd7e38a51731d14d9 WHIRLPOOL 38aca8cefcd9e3c9d587cd2cf489a7175acc1fd166af79f9ceed50f433151c6161a19d5928be86963d5b44a569fde7d449e9dde8081713b3d39854d99f288b15
diff --git a/sci-libs/neartree/neartree-5.1.1.ebuild b/sci-libs/neartree/neartree-5.1.1.ebuild
index b9631c226128..eff4bd3646ce 100644
--- a/sci-libs/neartree/neartree-5.1.1.ebuild
+++ b/sci-libs/neartree/neartree-5.1.1.ebuild
@@ -22,7 +22,7 @@ DEPEND="${RDEPEND}"
S="${WORKDIR}/${MY_P}"
src_prepare() {
- default
+ cmake-utils_src_prepare
cp "${FILESDIR}"/CMakeLists.txt . || die
}
diff --git a/sci-libs/orocos-bfl/Manifest b/sci-libs/orocos-bfl/Manifest
index efc91115aa03..45940ee7e08d 100644
--- a/sci-libs/orocos-bfl/Manifest
+++ b/sci-libs/orocos-bfl/Manifest
@@ -1,5 +1,5 @@
DIST orocos-bfl-0.8.0-src.tar.bz2 212899 SHA256 e5e14f8abbc4c38ca51f5ff97b36f66c69da3a706ee6276bcb151ada4c71195c SHA512 045bbc415feec66206774a8bdea3843a7edf233d221bd639b1dcc01906386ff55f114a9685e1008b741ae895e6aef33641a1eab67cb106d23a085d77f1a937d5 WHIRLPOOL ba5ff1ad0ff25cbc45367ed3d0bc1f356ef827f1b0ef6fa3e4c26a0a0da7ef8efc44bb6b0b1a33cbc068f28d079d0f9e096b14efd5df0d54d5dafe80e95c0fec
-EBUILD orocos-bfl-0.8.0.ebuild 1255 SHA256 2e5120499bf2392d4d9ead9fc7f1cd31e9d2beec56fcd42bcfae0bf373460b2a SHA512 b2d02482f8c5dfb6a7a98a96654ac97d09590fce90d7d2a427663c364c067d755e7fbf2bec28d117fc869c7f9db16ca16492e9d46c612214f76c4d7468145691 WHIRLPOOL 0d57a5246b0b15ab9c1276bc9d46b956c27380f50903664dea18161b153a53f1bfb662540faa038c23cb08e75ff73d871268404004472aff2a3d86d1913a576e
+EBUILD orocos-bfl-0.8.0.ebuild 1281 SHA256 e4e3d31eb40b146aae4b61f197558f14548b1ac8717e07228172366ea8de25ff SHA512 1cdb7c169d989f09b7e646700a6fb6d00087445032278508caf8329f6138b08745309caaef61611631ae37e42bab8753ef11bc65ad7eedee71dbc214a1da2d72 WHIRLPOOL a13adf3f8d709376a8f205b8e651ffc31723482d0cfa9be71dffcdb5aebb9443d0b386f1441297c40170bbc3df21bc7640cde20100c0b3145fdebb1e545072a2
MISC ChangeLog 2185 SHA256 506afd7a9d8caca0a94190791dfb88da02d71382c437f4053063523c4097ff3a SHA512 ac2e9f6968992028ef5b4cad8c81713dd14c07d444cc891d93c8d08989365fa8aa241f99eaf37b8266a7077712ddacb62166b67ad21a4ee1c7fcc9440ae9e157 WHIRLPOOL 149177a9f86ffed1df53053e537933e6d51ac6e244a4a4e17dbfbab111b2390a2c78dac39b6d7585d93823bbcd37dac3b2d76ab299a18fff66489f5bd8bbef6b
MISC ChangeLog-2015 466 SHA256 48623aaa887a1eee7f4c5e752364eff4df1787ede675a14b96249c6ceca143e3 SHA512 ff69419668b0ad5dbad04bb7b3be64adb728310d04db552960d28b38174dacc75edfdd6b6401f7c289f1d3ac556ee28346268725a9082fa2fc41cfc0027fa704 WHIRLPOOL 43ee17dc2dee6c0af9560c7a2b9d8688b26e826190d32011e5516d3024b86c852408b800fa1616074834c75452aa81e5550d64c7b72adac70e0a7f25c03f61ec
MISC metadata.xml 603 SHA256 b8af614cf3d6360b7fa6e60ddfc63081be3a8308f29e5f8d1d24686290c32611 SHA512 e4c29ba5a7a3cbe373fcbb4b69ca3ce99e6e092585f3d27af31469949f4ca28a6bf2d4b1850271ddc7c7bc2c70b43bf27411e9fcdef2039c3e0f0949523ded6c WHIRLPOOL 948d19710b8bca507531ff575b9f6b1673f30efd9728241b3140b46884e8e419768d33a6fc3a43317208884bbd62982abd8ffad3d8af0c2b29d6b79893228253
diff --git a/sci-libs/orocos-bfl/orocos-bfl-0.8.0.ebuild b/sci-libs/orocos-bfl/orocos-bfl-0.8.0.ebuild
index 355ea827ed9e..082cb9f10997 100644
--- a/sci-libs/orocos-bfl/orocos-bfl-0.8.0.ebuild
+++ b/sci-libs/orocos-bfl/orocos-bfl-0.8.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -24,6 +24,8 @@ DEPEND="${RDEPEND}
test? ( dev-util/cppunit )"
src_prepare() {
+ cmake-utils_src_prepare
+
sed -e 's:/lib:/${CMAKE_INSTALL_LIBDIR}:' \
-i "${S}/"{,src/,src/bindings/rtt/}CMakeLists.txt || die
}
diff --git a/sci-libs/scalapack/Manifest b/sci-libs/scalapack/Manifest
index 3bf3213f9b50..ce8e7f5f98a6 100644
--- a/sci-libs/scalapack/Manifest
+++ b/sci-libs/scalapack/Manifest
@@ -1,5 +1,5 @@
DIST scalapack-2.0.2.tgz 4779534 SHA256 0c74aeae690fe5ee4db7926f49c5d0bb69ce09eea75beb915e00bba07530395c SHA512 92c71d3de0900955511c527ab3ca57ff69d6d9edc390e69f93ac3769d32ce83a714326bcb6218c8c74b8874be2fdc8aad5e42c912a12581e8d4ce8829ea39248 WHIRLPOOL ca5e9261bb046684ecb820247ae2d9953083f9989b5cdeccd033c67519a5ab1eb3bd3f12d0225767513d5307342ccd96f582dbd264b2decc9033bf1f7f5d7dbc
-EBUILD scalapack-2.0.2.ebuild 1514 SHA256 f7e6d27f58f1ef6e24a310dc53beaba1c34ff0949f438f7e41d69597053d8c2d SHA512 9eaf38dcb6e4ddd29b0c4c7b102f0eba96985e2e3b2dbe44790d6c3c39d8d8b8f9afec439de237418ba78dc11c44745b7e046738140a3fa6fe314322350e87ad WHIRLPOOL 85bf9fca09012e6ba52d4dc6b8e914438a4088b6436a70ec4c1cbe8842c9ae929108d5b94649a0de157e104923d2b05ad7183be0e366860b95659504314a3651
+EBUILD scalapack-2.0.2.ebuild 1540 SHA256 4f2372401dd8678027ba67138e12bbe9e2624aecee64ec2346c41f9877599b07 SHA512 653d3002b4a16ddc5e8b9de2b6b7918e8a7380f5366d7bcd7506ce9c2fc3feb9547c2b9a6af4b85711c46d378282af29435fad60b43f5fa61914786bfbc7bbac WHIRLPOOL 0d6f740c7067c0c4a6856746ab0fd8bc05590c2a58ec551a1718865d09feb7f19e6cc0216011019b66914aca459599c4f7c4b695ae9ffa9fc150c610d1ad90ea
MISC ChangeLog 2433 SHA256 d7b790787fe94b35830012af1fef71e05fb206aef092abb8f84f21a31bdbabbd SHA512 6a6ca0518d5be3291b4fa31777301b9d46428d292dfb12ae55ec2da211c2884cb61c1c27b6b4acaa3e433fdb61df09dfceeb5251e140f5ca8862aedae82575dc WHIRLPOOL b72b6d21869240574e3ce623c5c53399db940a87e55ded5bced999a08e7286b2324026bae81d4fcaf65ad09bf39db73d9f7816a673e2ad23f25bcd267e3176e4
MISC ChangeLog-2015 1687 SHA256 f5ae5b5a27d6e63f8d829112518e0b643b0362e163a7a945acfbe1f69f3bc4d2 SHA512 11e58a7c94e35f2e3759d895d518a6f610a81beeac86153893710a3328fa2bab41efdaaf8e3e7bdba0452510dd53f9c8f3153358726649b9d27e7cf28a1f09ae WHIRLPOOL c9537f569698c1f9a89f131f1d76b0b6be7653abfa09db86665092cb43b485a1a51f70ff56a2a97323f157141d115f4148b935e4ce55ecfcf30735b9d34df18a
MISC metadata.xml 656 SHA256 3299fbdac46be798a2e2373f1a29f05ecf046e16bce1d19e10c247b13894da87 SHA512 c0ee34b1315583fd3d46f707c56ca1c5d3ff5bc85c2a96c65ca02258d3e6799ed6d9f3e3352d8bacd3053681e7b1b15e55049a62520c933df06ede6022786354 WHIRLPOOL a88416e87d2123853427721d8181ede3f79c96fa16c43e46601d676a9544903e3c57a922849663924d4fb113466f83eded75b81cac77cb5e5a01b797626858ea
diff --git a/sci-libs/scalapack/scalapack-2.0.2.ebuild b/sci-libs/scalapack/scalapack-2.0.2.ebuild
index fadcb6568bd5..68ade1f4a1ba 100644
--- a/sci-libs/scalapack/scalapack-2.0.2.ebuild
+++ b/sci-libs/scalapack/scalapack-2.0.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -21,6 +21,8 @@ DEPEND="${RDEPEND}
virtual/pkgconfig"
src_prepare() {
+ cmake-utils_src_prepare
+
use static-libs && mkdir "${WORKDIR}/${PN}_static"
# mpi does not have a pc file
sed -i -e 's/mpi//' scalapack.pc.in || die
diff --git a/sci-libs/superlu/Manifest b/sci-libs/superlu/Manifest
index 1f17b924827a..7e2d079d165f 100644
--- a/sci-libs/superlu/Manifest
+++ b/sci-libs/superlu/Manifest
@@ -5,7 +5,7 @@ AUX superlu-5.2.1-pkgconfig.patch 1013 SHA256 b69ca42c7c89335aaefc96677cf2b2fe6d
DIST superlu_4.3.tar.gz 2876631 SHA256 7aa08e75fba6b242aef20f10a31d7e052ad74ad29384e68d41a61d1d642f18da SHA512 5c13da47b79160be14719f62ccdf5d59142a172e25a988fa340eaeb001a64d7f45ba39e675cb7aa3571bec52cb3a7cda0bb7a708c9608184ba6251edb7990e8c WHIRLPOOL 034d924a736d101497df13f4f69d96b9e375c78a207df1615a7d22b639e24d755e9cb16e952c57ee8eece8d4ea7aa9f9d0576aaaee19ae0b0898698973864c15
DIST superlu_5.2.1.tar.gz 2560875 SHA256 28fb66d6107ee66248d5cf508c79de03d0621852a0ddeba7301801d3d859f463 SHA512 30538b4c2809294b8f34646bce6445944f21a1dffaf3ec0a0f29a55d5261caa56e4279d7722bb95cc9d89450d36ded969617edc82ecce7d0f1dfb24040d80d07 WHIRLPOOL 25d08498b874ac2ee806759cb381b7cfc563a213da9793630031957bb9fe63983d8671f502b699b72615ffba9dd6a23ab33010bda67aba9663cba302414eeb8b
EBUILD superlu-4.3-r1.ebuild 1625 SHA256 e859e71b774626ce7db21e9cd9559399ade127494f73dad62928740fae7079a6 SHA512 1f43902eb51afc5b238cda59885b85ad33cd310c7dd70fbc33b67222b39357d277b8f54b46c636101f232cc51b6ed2fb6456445cee35714e41882e0a9ee48909 WHIRLPOOL 436bf31efbe893793de0bdf3f352b10f26c9338904433043385a2a3fe3c1df52f84c184e94bbabb403062687f0ddd0fe93640516d327ee1b4f7d4b97b1967e46
-EBUILD superlu-5.2.1-r1.ebuild 1459 SHA256 29b9b0e15e261fb3ea078497d6ad69c3ae3ae47b75625f6ce3b969dfc9c0c543 SHA512 586d09b75c5f1517f035cd1979e3b47d8f26c372216437a09b3274494d7e04578c27426c8da522089fd1f7a72f5c8a952d48e028cbb725d818149e12f47f3ea7 WHIRLPOOL c0fac7cc95d6b82f4d189b6f0e9b13d2e5666d36acb5f5520618f1e9b08554fc7623e2a39022b603abf93884f683201f44d26b160de5e2baa3590e9612527b6c
+EBUILD superlu-5.2.1-r1.ebuild 1475 SHA256 c0e7da8537fd1c28a956c1dc3c6456598a21defaf53eeda55d40b5831e23de1c SHA512 e5abdb4163f9cfa811063408ef86206102acb78a879f9356154243843167ad87ec8a6ac8aef65be1a0b64722f63707fd9ca342844fe75f977000539681d36b6c WHIRLPOOL 1b15a42b09359712f00f11c4b8b5149ae91a0a62ab12015f729bd20d662c4359c6fc915132b86d12510263f77f4ff8e3a30a21f796ae1a98609a2523cd6d241a
MISC ChangeLog 2851 SHA256 44f359dce2a3039299fa5fa9ff3e352c0326c7fbfadc51f102d6e2fb2dbc036c SHA512 ab4e4aea98bb65ad1df730d5315c27e254116b66818483fb79bdd92b9b6c7eb6fbb8223383702ff52ad20795204b5a840beb6c8a81db4ba58ed6b57b2f574366 WHIRLPOOL a411229a34b00ec6651444104412249169af9910b384e8abebadd0f1780fd6f255fbb426ae729be185ce13fa00a412f4b2e00ed192884b6841a47dbb92036413
MISC ChangeLog-2015 5075 SHA256 20bd2312ceed248ef7ee7261d582962c9f4d13cde9f5aa59606a7e74f9243bbd SHA512 790a27620fb9efdef30073187a16c0bdbac1fcb745b9f43bb07836650a115892a70591cfb7625944fd7718212b94f025f59003dabd1460ad64086d3cb72f3d24 WHIRLPOOL 564f41836747b505a6016dddc5bab39af863279c4e761cda0034f7b58ffa00771458aa5b5966ebed54e89061cce04d24c3987b221e69192608df9079b12ae405
MISC metadata.xml 1404 SHA256 51261bee09cffe52539937c7e23b1f7d6ee87798659ad00d25ca55779299c923 SHA512 8b758572ed599bdf43898050e265ce8ea82c4952af97471c09ee0013e56cf6928df3f3a436516c4fae7a38a13bba4a3437e130f294f942eaaae05125fa5fbdea WHIRLPOOL 71178833c9395ad75ab5fec4c3ba1c93373cdaaa07ba8421dfd2fc63a009c4a81ccf2716205797dfafb34ed3d47f284b0f2d546bf242a4c57253419ae8da2a2b
diff --git a/sci-libs/superlu/superlu-5.2.1-r1.ebuild b/sci-libs/superlu/superlu-5.2.1-r1.ebuild
index 8f2fa083bb98..8325ae9af567 100644
--- a/sci-libs/superlu/superlu-5.2.1-r1.ebuild
+++ b/sci-libs/superlu/superlu-5.2.1-r1.ebuild
@@ -42,7 +42,7 @@ PATCHES=(
S="${WORKDIR}/${MY_PN}_${PV}"
src_prepare() {
- default
+ cmake-utils_src_prepare
# respect user's CFLAGS
sed -i -e 's/O3//' CMakeLists.txt || die
}