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-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
- SHOGUN - is a new machine learning toolbox with focus on large
- scale kernel methods and especially on Support Vector Machines
- (SVM) with focus to bioinformatics. It provides a generic SVM
- object interfacing to several different SVM implementations. Each
- of the SVMs can be combined with a variety of the many kernels
- implemented. It can deal with weighted linear combination of a
- number of sub-kernels, each of which not necessarily working on the
- same domain, where an optimal sub-kernel weighting can be learned
- using Multiple Kernel Learning. Apart from SVM 2-class
- classification and regression problems, a number of linear methods
- like Linear Discriminant Analysis (LDA), Linear Programming Machine
- (LPM), (Kernel) Perceptrons and also algorithms to train hidden
- markov models are implemented. The input feature-objects can be
- dense, sparse or strings and of type int/short/double/char and can
- be converted into different feature types. Chains of preprocessors
- (e.g. substracting the mean) can be attached to each feature object
- allowing for on-the-fly pre-processing.
- </longdescription>
- <use>
- <flag name="R">Enable support for <pkg>dev-lang/R</pkg></flag>
- <flag name="octave">Enable support for <pkg>sci-mathematics/octave</pkg></flag>
- <flag name="opencl">Enable support for building against OpenCL</flag>
- </use>
-</pkgmetadata>