1 files changed, 45 insertions, 0 deletions
diff --git a/sci-libs/htslib/htslib-1.9.ebuild b/sci-libs/htslib/htslib-1.9.ebuild
new file mode 100644
index 000000000000..69df48a332f2
--- /dev/null
+++ b/sci-libs/htslib/htslib-1.9.ebuild
@@ -0,0 +1,45 @@
+# Copyright 1999-2018 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+DESCRIPTION="C library for high-throughput sequencing data formats"
+HOMEPAGE="http://www.htslib.org/"
+SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
+
+SLOT="0/2"
+LICENSE="MIT"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="+bzip2 curl +lzma static-libs"
+
+RDEPEND="
+	bzip2? ( app-arch/bzip2:= )
+	curl? ( net-misc/curl )
+	lzma? ( app-arch/xz-utils:= )"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+	default
+
+	# upstream injects LDFLAGS into the .pc file,
+	# which is a big nono for QA
+	sed 's/private_LIBS=$LDFLAGS/private_LIBS=""/g' -i configure || die
+}
+
+src_configure() {
+	econf \
+		--disable-gcs \
+		--disable-plugins \
+		--disable-s3 \
+		$(use_enable bzip2 bz2) \
+		$(use_enable curl libcurl) \
+		$(use_enable lzma)
+}
+
+src_install() {
+	default
+
+	if ! use static-libs; then
+		find "${D}" -name '*.a' -delete || die
+	fi
+}