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-rw-r--r--sci-chemistry/theseus/Manifest2
-rw-r--r--sci-chemistry/theseus/theseus-3.3.0-r1.ebuild28
2 files changed, 16 insertions, 14 deletions
diff --git a/sci-chemistry/theseus/Manifest b/sci-chemistry/theseus/Manifest
index 66b55599c691..c4c13d26de42 100644
--- a/sci-chemistry/theseus/Manifest
+++ b/sci-chemistry/theseus/Manifest
@@ -1,3 +1,3 @@
DIST theseus_3.3.0.tar.gz 22548124 BLAKE2B 0ad49f768e1584bf40e90ff6fd0d884b6b27ee59ad31ce75050293b817a3747969ab0c4b4ff982aadbdc5301c1c56522540b78aab045e841c099a80dd546c8e9 SHA512 1fba3e8019a40214defdae13d4721d170ee698337d8efd4e872af22f8ab3cb1fdd52fa9f19a858ee51bc98150692af0c6016033feb0d76f29acaf7fffbb430e2
-EBUILD theseus-3.3.0-r1.ebuild 1510 BLAKE2B 8527637cfbeb666aa84112bf01867ba14d34e819ccb8f372bfc032315eb8e00645af56588262d0a088db1976d439531f96ffaee8af5a42e99fe8eebb60dd6e5d SHA512 ce61c47d06d624ef6b8c70dba821715e7fe8ef2a82ccacfd16c53bd2e76b77343299ead01a78267dd7d7c4fb9b8894d0fa58bd86234ce011011e99dcb1229116
+EBUILD theseus-3.3.0-r1.ebuild 1526 BLAKE2B 487eb12d25750eebb2ed066216111cfcdea94ad35860a70bc135e3f31d351058221bd9bb327bd562cb625deb608ae7b99d6e2e53f195315e01710b8e76136c89 SHA512 bdb6578de0350773930645ab8e6e0b852115c2568fa45f182b4e88516891299b6ff042d00e2c71eea6e0abc8e015f5dd9c0455959eaac684ad3ca53266f12c97
MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
diff --git a/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild b/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild
index f9e62b3916d7..fe012719670a 100644
--- a/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild
+++ b/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild
@@ -1,40 +1,42 @@
# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=8
-inherit multilib toolchain-funcs
+inherit toolchain-funcs
DESCRIPTION="Maximum likelihood superpositioning and analysis of macromolecular structures"
HOMEPAGE="http://www.theseus3d.org/"
SRC_URI="http://www.theseus3d.org/src/${PN}_${PV}.tar.gz"
+S="${WORKDIR}"/${PN}_src
-SLOT="0"
LICENSE="GPL-3"
+SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="examples"
RDEPEND="
sci-libs/gsl:=
|| (
+ sci-biology/clustalw:2
+ sci-biology/kalign
+ sci-biology/mafft
sci-biology/muscle
sci-biology/probcons
- sci-biology/mafft
sci-biology/t-coffee
- sci-biology/kalign
- sci-biology/clustalw:2
- )"
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}"/${PN}_src/
+ )
+"
+DEPEND="${RDEPEND}"
+BDEPEND="virtual/pkgconfig"
src_prepare() {
- cat >> make.inc <<- EOF
+ default
+
+ cat >> make.inc <<- EOF || die
ARCH = $(tc-getAR)
ARCHFLAGS = -rvs
RANLIB = $(tc-getRANLIB)
- LOCALLIBDIR = "${EPREFIX}/usr/$(get_libdir)
+ LOCALLIBDIR = "${EPREFIX}"/usr/$(get_libdir)
SYSLIBS = $($(tc-getPKG_CONFIG) --libs gsl) -lpthread
LIBS = -ldistfit -lmsa -ldssplite -ldltmath -lDLTutils -ltheseus
LIBDIR = -L./lib