diff options
Diffstat (limited to 'sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch')
| -rw-r--r-- | sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch | 64 |
1 files changed, 64 insertions, 0 deletions
diff --git a/sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch b/sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch new file mode 100644 index 000000000000..e7bf1d5007ff --- /dev/null +++ b/sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch @@ -0,0 +1,64 @@ +diff -urN AutoDock-Vina-1.2.5.orig/build/linux/debug/Makefile AutoDock-Vina-1.2.5/build/linux/debug/Makefile +--- AutoDock-Vina-1.2.5.orig/build/linux/debug/Makefile 2024-03-05 13:23:49.210511903 +0300 ++++ AutoDock-Vina-1.2.5/build/linux/debug/Makefile 2024-03-05 13:25:34.028499976 +0300 +@@ -1,7 +1,7 @@ + BASE=/usr + BOOST_VERSION= + BOOST_INCLUDE = $(BASE)/include +-C_PLATFORM=-static -pthread ++C_PLATFORM=-pthread + GPP=g++ + C_OPTIONS= -g -std=gnu++11 + BOOST_LIB_VERSION= +diff -urN AutoDock-Vina-1.2.5.orig/build/linux/release/Makefile AutoDock-Vina-1.2.5/build/linux/release/Makefile +--- AutoDock-Vina-1.2.5.orig/build/linux/release/Makefile 2024-03-05 13:23:49.213845279 +0300 ++++ AutoDock-Vina-1.2.5/build/linux/release/Makefile 2024-03-05 13:26:10.285621339 +0300 +@@ -1,7 +1,7 @@ + BASE=/usr/local + BOOST_VERSION= + BOOST_INCLUDE = $(BASE)/include +-C_PLATFORM=-static -pthread ++C_PLATFORM=-pthread + GPP=g++ + C_OPTIONS= -O3 -DNDEBUG -std=c++11 + BOOST_LIB_VERSION= +diff -urN AutoDock-Vina-1.2.5.orig/build/makefile_common AutoDock-Vina-1.2.5/build/makefile_common +--- AutoDock-Vina-1.2.5.orig/build/makefile_common 2024-03-05 13:23:49.213845279 +0300 ++++ AutoDock-Vina-1.2.5/build/makefile_common 2024-03-05 13:28:30.557370911 +0300 +@@ -14,7 +14,7 @@ + #CC = ${GPP} ${C_PLATFORM} -ansi -pedantic -Wno-long-long ${C_OPTIONS} $(INCFLAGS) + CC = ${GPP} ${C_PLATFORM} -ansi -Wno-long-long ${C_OPTIONS} $(INCFLAGS) + +-LDFLAGS = -L$(BASE)/lib -L. ++LDFLAGS = -L. + + # test if boost_thread-mt exists, this is + # necessary as some versions of boost only +@@ -32,22 +32,22 @@ + ifeq ($(BOOST_STATIC), y) + LIBS = ${BASE}/lib/libboost_system${BOOST_LIB_VERSION}.a ${BASE}/lib/libboost_thread${threadmt}${BOOST_LIB_VERSION}.a ${BASE}/lib/libboost_serialization${BOOST_LIB_VERSION}.a ${BASE}/lib/libboost_filesystem${BOOST_LIB_VERSION}.a ${BASE}/lib/libboost_program_options${BOOST_LIB_VERSION}.a + else +-LIBS = -l boost_system${BOOST_LIB_VERSION} -l boost_thread${threadmt}${BOOST_LIB_VERSION} -l boost_serialization${BOOST_LIB_VERSION} -l boost_filesystem${BOOST_LIB_VERSION} -l boost_program_options${BOOST_LIB_VERSION}#-l pthread ++LIBS = -l boost_system -l boost_thread -l boost_serialization -l boost_filesystem -l boost_program_options -l pthread + endif + + .SUFFIXES: .cpp .o + + %.o : ../../../src/lib/%.cpp +- $(CC) $(CFLAGS) -o $@ -c $< ++ $(CC) $(CXXFLAGS) -o $@ -c $< + + %.o : ../../../src/design/%.cpp +- $(CC) $(CFLAGS) -I ../../../src/lib -o $@ -c $< ++ $(CC) $(CXXFLAGS) -I ../../../src/lib -o $@ -c $< + + %.o : ../../../src/main/%.cpp +- $(CC) $(CFLAGS) -I ../../../src/lib -o $@ -c $< ++ $(CC) $(CXXFLAGS) -I ../../../src/lib -o $@ -c $< + + %.o : ../../../src/split/%.cpp +- $(CC) $(CFLAGS) -I ../../../src/lib -o $@ -c $< ++ $(CC) $(CXXFLAGS) -I ../../../src/lib -o $@ -c $< + + all: vina vina_split + |