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-rw-r--r--sci-biology/gatk/gatk-2.4.ebuild32
1 files changed, 0 insertions, 32 deletions
diff --git a/sci-biology/gatk/gatk-2.4.ebuild b/sci-biology/gatk/gatk-2.4.ebuild
deleted file mode 100644
index bab228e77f5f..000000000000
--- a/sci-biology/gatk/gatk-2.4.ebuild
+++ /dev/null
@@ -1,32 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-EANT_BUILD_TARGET="dist"
-EANT_NEEDS_TOOLS="true"
-JAVA_ANT_REWRITE_CLASSPATH="true"
-
-inherit java-pkg-2 java-ant-2 vcs-snapshot
-
-DESCRIPTION="The Genome Analysis Toolkit"
-HOMEPAGE="http://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit"
-SRC_URI="https://github.com/broadgsa/gatk/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64"
-
-RDEPEND=">=virtual/jre-1.6"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- java-pkg-2_src_prepare
- sed -i '/property name="ivy.home"/ s|${user.home}|'${WORKDIR}'|' build.xml || die
-}
-
-src_install() {
- java-pkg_dojar dist/*.jar
- java-pkg_dolauncher GenomeAnalysisTK --jar GenomeAnalysisTK.jar
- java-pkg_dolauncher AnalyzeCovariates --jar AnalyzeCovariates.jar
-}