diff options
Diffstat (limited to 'metadata/md5-cache/sci-chemistry')
-rw-r--r-- | metadata/md5-cache/sci-chemistry/Manifest.gz | bin | 26829 -> 26341 bytes | |||
-rw-r--r-- | metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 | 8 | ||||
-rw-r--r-- | metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 | 13 | ||||
-rw-r--r-- | metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 | 12 | ||||
-rw-r--r-- | metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 | 14 | ||||
-rw-r--r-- | metadata/md5-cache/sci-chemistry/tm-align-20150914 | 8 |
6 files changed, 8 insertions, 47 deletions
diff --git a/metadata/md5-cache/sci-chemistry/Manifest.gz b/metadata/md5-cache/sci-chemistry/Manifest.gz Binary files differindex d9127ed713fd..27fb0b14303e 100644 --- a/metadata/md5-cache/sci-chemistry/Manifest.gz +++ b/metadata/md5-cache/sci-chemistry/Manifest.gz diff --git a/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 b/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 index 07aa43fb9592..fbc5fe23c843 100644 --- a/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 +++ b/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 @@ -1,14 +1,14 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=virtual/pkgconfig doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] +DEPEND=dev-cpp/eigen:3 dev-libs/maloc[mpi=] sys-libs/readline virtual/blas fetk? ( sci-libs/amd sci-libs/fetk sci-libs/superlu sci-libs/umfpack ) mpi? ( virtual/mpi ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] ) virtual/pkgconfig doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] DESCRIPTION=Evaluation of electrostatic properties of nanoscale biomolecular systems EAPI=5 -HOMEPAGE=http://www.poissonboltzmann.org/apbs/ +HOMEPAGE=https://www.poissonboltzmann.org/apbs/ IUSE=debug doc examples fast +fetk iapbs mpi openmp python tools python_targets_python2_7 KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux LICENSE=BSD -RDEPEND=dev-cpp/eigen:3 dev-libs/maloc[mpi=] virtual/blas sys-libs/readline fetk? ( sci-libs/fetk sci-libs/amd sci-libs/umfpack sci-libs/superlu ) mpi? ( virtual/mpi ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] +RDEPEND=dev-cpp/eigen:3 dev-libs/maloc[mpi=] sys-libs/readline virtual/blas fetk? ( sci-libs/amd sci-libs/fetk sci-libs/superlu sci-libs/umfpack ) mpi? ( virtual/mpi ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] REQUIRED_USE=iapbs? ( fetk ) mpi? ( !python ) python? ( tools fetk iapbs python_targets_python2_7 ) python_targets_python2_7 SLOT=0 SRC_URI=https://github.com/Electrostatics/apbs-pdb2pqr/archive/74fcb8676de69ed04ddab8976a8b05a6caaf4d65.zip -> apbs-1.4.1.zip _eclasses_=cmake-utils f0bc1c175684130a76ab6c17f575d820 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 8595c9c7530ac3963f3aa0d77aa7e2d8 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 55aaa148741116aa54ad0d80e361818e ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib b2f01ad412baf81650c23fcf0975fa33 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 3a0fc81f484bfdbd9c2b7448015a36e4 python-utils-r1 12114a2a9aab35b93efc037a196b3234 toolchain-funcs f164325a2cdb5b3ea39311d483988861 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 93b2dfbb00a09161e1e7f6360c0f7f6b -_md5_=b04838eb8d0fe55b17589c3ab6d29280 +_md5_=6a96394a927ad8fef2bf8994cd06837c diff --git a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 b/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 deleted file mode 100644 index 59ff5e1f7132..000000000000 --- a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 +++ /dev/null @@ -1,13 +0,0 @@ -DEFINED_PHASES=compile configure install postinst prepare setup test -DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) >=dev-util/cmake-2.4.8 doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6 -DESCRIPTION=Interconverts file formats used in molecular modeling -EAPI=5 -HOMEPAGE=http://openbabel.sourceforge.net/ -IUSE=doc openmp test wxwidgets -KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux ~ppc-macos -LICENSE=GPL-2 -RDEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) -SLOT=0 -SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz -_eclasses_=cmake-utils f0bc1c175684130a76ab6c17f575d820 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 55aaa148741116aa54ad0d80e361818e ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib b2f01ad412baf81650c23fcf0975fa33 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs f164325a2cdb5b3ea39311d483988861 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets ed63935305b6de2210ae97a407719d89 xdg-utils 93b2dfbb00a09161e1e7f6360c0f7f6b -_md5_=d880844fba044836488350725d6a444f diff --git a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 deleted file mode 100644 index 8e28c1297d72..000000000000 --- a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 +++ /dev/null @@ -1,12 +0,0 @@ -DEFINED_PHASES=compile configure install prepare test unpack -DEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 >=dev-util/cmake-2.4.8 >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6 dev-lang/perl:=[-build(-)] -DESCRIPTION=Perl bindings for OpenBabel -EAPI=5 -HOMEPAGE=http://openbabel.sourceforge.net/ -KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux -LICENSE=GPL-2 -RDEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 dev-lang/perl:=[-build(-)] -SLOT=0 -SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz -_eclasses_=cmake-utils f0bc1c175684130a76ab6c17f575d820 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 55aaa148741116aa54ad0d80e361818e ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib b2f01ad412baf81650c23fcf0975fa33 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module 0bd80b082268528830da0d72ac571d9a preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs f164325a2cdb5b3ea39311d483988861 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 93b2dfbb00a09161e1e7f6360c0f7f6b -_md5_=7d40af4aa49703f526c8935423380ead diff --git a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 deleted file mode 100644 index c9b818711f70..000000000000 --- a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 +++ /dev/null @@ -1,14 +0,0 @@ -DEFINED_PHASES=compile configure install prepare test -DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6 -DESCRIPTION=Python bindings for OpenBabel (including Pybel) -EAPI=5 -HOMEPAGE=http://openbabel.sourceforge.net/ -IUSE=python_targets_python2_7 python_targets_python3_4 -KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux -LICENSE=GPL-2 -RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib -REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 ) -SLOT=0 -SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz -_eclasses_=cmake-utils f0bc1c175684130a76ab6c17f575d820 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 55aaa148741116aa54ad0d80e361818e ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multibuild 40fe59465edacd730c644ec2bc197809 multilib b2f01ad412baf81650c23fcf0975fa33 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 12114a2a9aab35b93efc037a196b3234 toolchain-funcs f164325a2cdb5b3ea39311d483988861 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 93b2dfbb00a09161e1e7f6360c0f7f6b -_md5_=3f5ab0b18673814af37849f1890bfb74 diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20150914 b/metadata/md5-cache/sci-chemistry/tm-align-20150914 index d273814c79e4..cf7429298ae6 100644 --- a/metadata/md5-cache/sci-chemistry/tm-align-20150914 +++ b/metadata/md5-cache/sci-chemistry/tm-align-20150914 @@ -1,13 +1,13 @@ DEFINED_PHASES=compile configure install prepare setup test DEPEND=sys-devel/make >=dev-util/cmake-3.9.6 virtual/fortran DESCRIPTION=Quick & Accurate Structural Alignment -EAPI=5 +EAPI=6 HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/TM-align/ -IUSE=static custom-cflags -KEYWORDS=~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux +IUSE=custom-cflags static +KEYWORDS=~amd64 ppc ppc64 ~x86 ~amd64-linux ~x86-linux LICENSE=tm-align RDEPEND=virtual/fortran SLOT=0 SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20150914.tar.gz _eclasses_=cmake-utils f0bc1c175684130a76ab6c17f575d820 desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 flag-o-matic 55aaa148741116aa54ad0d80e361818e fortran-2 68fcf50e02640de6eb5698ea038d9537 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib b2f01ad412baf81650c23fcf0975fa33 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs f164325a2cdb5b3ea39311d483988861 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 93b2dfbb00a09161e1e7f6360c0f7f6b -_md5_=dffd0173b777f1622e966e7bd1838993 +_md5_=0d96f6c5e40e3e66fd57af81a19fe028 |