diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
110 files changed, 109 insertions, 109 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 index 787444a2b544..7fc6d8a0adc8 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 +++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz -_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index b24aead8ce26..4c6c57a4a34e 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_10(-)?,python_targets_python3_11 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex f176fdafb7c7..8702e8616aad 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/STAR-2.7.10a b/metadata/md5-cache/sci-biology/STAR-2.7.10a index cdde42379ec2..05a0a9571da8 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.7.10a +++ b/metadata/md5-cache/sci-biology/STAR-2.7.10a @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.7.10a.tar.gz -> STAR-2.7.10a.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=521aed057c81cfa841ab4b2dcf63e65b diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4 index 02de42fec07b..5eb96f87f442 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.3.4 +++ b/metadata/md5-cache/sci-biology/abyss-2.3.4 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=9a708eff89b221551fbb0bcc299ccfa3 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r5 b/metadata/md5-cache/sci-biology/amap-2.2-r5 index f4b5e6a2a0c8..20e6e21a0b0e 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r5 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r5 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=java-ant-2 19239227fab7816f57abbc0c7d819396 java-pkg-opt-2 4d26f2efd4c5ec82b66d1e8816f421b2 java-utils-2 8c72ea36a4935f626b13a30141d0d39c multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=java-ant-2 19239227fab7816f57abbc0c7d819396 java-pkg-opt-2 4d26f2efd4c5ec82b66d1e8816f421b2 java-utils-2 8c72ea36a4935f626b13a30141d0d39c multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=b4e132581d5e91612a875f7f94387a1b diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 2b8f31604ee4..73d7044c5bf6 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=4c500e601e76f119e63d2dc13321648c diff --git a/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 b/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 index 85d6d193aba3..7b2142a912e0 100644 --- a/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 +++ b/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 @@ -11,5 +11,5 @@ LICENSE=Artistic RDEPEND=dev-db/sqlite:3 dev-db/mysql++:= dev-db/mysql-connector-c:= dev-libs/boost:=[zlib] sci-biology/bamtools:= sci-biology/samtools:0 sci-libs/gsl:= sci-libs/htslib:= sci-libs/suitesparse sci-mathematics/lpsolve:= sys-libs/zlib SLOT=0 SRC_URI=https://github.com/Gaius-Augustus/Augustus/archive/refs/tags/v3.4.0.tar.gz -> augustus-3.4.0.tar.gz -_eclasses_=docs f4e4c22139b7811a4dbdafaede74c229 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=docs f4e4c22139b7811a4dbdafaede74c229 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=5af682d1467b7eddf54bfe603492b4fa diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index daa97be46449..d008ca5a1ae1 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 67e2dc5c8c50..8f03f82aa2fb 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -9,5 +9,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 2358a7b20091609e24bd3a83b3ac5991 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 2358a7b20091609e24bd3a83b3ac5991 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.17 b/metadata/md5-cache/sci-biology/bcftools-1.17 index a4935a8e9911..d86b20b5c417 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.17 +++ b/metadata/md5-cache/sci-biology/bcftools-1.17 @@ -12,5 +12,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_10? ( dev-python/matplotlib[p REQUIRED_USE=^^ ( python_single_target_python3_10 python_single_target_python3_11 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.17/bcftools-1.17.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=5271780ace94107aae357a985f191e14 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 29a0618f2e64..4df4e5b5d2c5 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 845fed6b6dfc35679a4fea289272ddc0 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 845fed6b6dfc35679a4fea289272ddc0 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=6362b2cc40163766b0448cea57894c3a diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 4c6becbe66a4..f09a1cc8fba8 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -11,5 +11,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 index d3db3e4492bc..2752175c649b 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=18fc653ace8feaf53e4d1c1818b7b00c diff --git a/metadata/md5-cache/sci-biology/biopandas-0.4.1 b/metadata/md5-cache/sci-biology/biopandas-0.4.1 index d7661762afed..a20780c440cb 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.4.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.4.1 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/BioPandas/biopandas/archive/refs/tags/v0.4.1.tar.gz -> biopandas-0.4.1.gh.tar.gz -_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=3b87692064234ef962aa52c8f93f9e17 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 index 8c41be0813ac..50fbf4e3e4dd 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 @@ -14,5 +14,5 @@ REQUIRED_USE=minimal? ( !graphviz ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=275c67756e8440c392c02c29c75e1388 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 index a8c53092bc1c..5aa4d86d2b5b 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=56259564f94ae015e0cdd27bc2db8b21 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 index fc4bafe2dc6f..1662049c86b6 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:= RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=6c074e2b53c3e7242c6ed1e352537670 diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 index 8c67e8049a18..4cd42626049f 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module dd4003d3308d7cad2b2d4e2b8298ffb2 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=517668f69988f82c6a81d26d36633342 diff --git a/metadata/md5-cache/sci-biology/biopython-1.81-r1 b/metadata/md5-cache/sci-biology/biopython-1.81-r1 index 3a30822d63c7..cf9743fc5b73 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.81-r1 +++ b/metadata/md5-cache/sci-biology/biopython-1.81-r1 @@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_10(-)?,python_targets_pytho REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) SLOT=0 SRC_URI=https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.81.tar.gz -_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 2eecb475512bc76e5ea9192a681b9e6b python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 2eecb475512bc76e5ea9192a681b9e6b python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=8a03119f9fac05f570005f3d1be8aa57 diff --git a/metadata/md5-cache/sci-biology/blat-34-r3 b/metadata/md5-cache/sci-biology/blat-34-r3 index 1dc6d7de7342..6c6068d8cd2d 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r3 +++ b/metadata/md5-cache/sci-biology/blat-34-r3 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=5de19b6facdbdd7214fad082a7d27f77 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4 index c8a73eb30ca4..b294a7a35e71 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.4.4 +++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4 @@ -12,5 +12,5 @@ RDEPEND=python_single_target_python3_10? ( dev-lang/python:3.10 ) dev-lang/perl REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_10 ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=7e782380091eb080dc11ed573335cbf2 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.5.1 b/metadata/md5-cache/sci-biology/bowtie-2.5.1 index cf8b5e0ad6d0..480d13f58418 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.5.1 +++ b/metadata/md5-cache/sci-biology/bowtie-2.5.1 @@ -13,5 +13,5 @@ REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_10 python_sing RESTRICT=test SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.5.1/bowtie2-2.5.1-source.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=831933c38b43e507442ee567a3c3583f diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index 5a0596ff386f..59f770a49037 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=620c3569e8293303737f7844385c7e82 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 index 91ebb37f2984..698c882a1279 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=72c254d2d4b43c49ff9b0ddcde699acb diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 index b5629d02e00a..8fcdd290886c 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=e2928c88a8676586ff3c5e4a7f534608 diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 170d5fce8cc1..d3dd9243dbe6 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc ppc64 sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=48325a27354b2683cb1b693a641b7ab7 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 index c3cfb289650f..8ed6bc1d7f1f 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 @@ -10,5 +10,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=689841db0e3b7d6629b51049a2942165 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index c3fada01cb08..e4e828427e60 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 qmake-utils a8dd17b1d94586164f5e3fc12b1c6b81 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 qmake-utils a8dd17b1d94586164f5e3fc12b1c6b81 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=26ebb7c606a394252d2be9f3c156984f diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index b9a7dc63354b..79980f871a2e 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=b2a78c4cfa60eb348ae63d076ecb5fba diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 index 8ee90470f72b..e870ef767375 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=879353dc71e4dca1cd8026068a0c808c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r2 b/metadata/md5-cache/sci-biology/elph-1.0.1-r2 index 2b26d4d08976..49587df7b314 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r2 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=12ec147b7c0b74b6a61b6fb56542afb5 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index 37e0165cea5c..dd7113fb0202 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index abfa8d7efa11..ada566c7e3a4 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index e0b794fea75c..ad3403cab574 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index 8f11b9c7600a..69e37739b934 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index a4edbbf28b7a..d31d86a3d34a 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index 075648b65def..bd4fa7374a7c 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index d0e4b984b346..da370b20a79e 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=95026ca22c2bacedf52a70b4428e7753 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index d0fdaab605dc..6f719861d48c 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index 98a2c702adef..b3a687dad4e3 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index d6b316b3c414..08f168b34291 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=b6d66fbfe89f6c64f635551357dc90f4 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index d6a4911e64eb..36afd51b100a 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=93c762366f9cfe8fbfdffd0fdc0483d5 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index 48cd4d7d622a..e877609b759b 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index ceec4dcdb9c6..b80ec3d7b1a9 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index 2e48c60c08c8..b04341d2f731 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index 1b77f88e6cbc..9129ee39978a 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 index e034cf294d10..7da7974d77e9 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 @@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=9856dbbe227d34ba8fd5a46c30dc912f diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 index bd02f543ab59..4ab68a8cc844 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 @@ -11,5 +11,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=88a096386941104cea7615974ecef526 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 index 6cbeed931afd..cd1e10d2ee46 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 @@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=4bd132dac9c502e76b3000e9c6d1e897 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index d7a73f0571c1..025252ea0817 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -10,5 +10,5 @@ LICENSE=Artistic RDEPEND=dev-libs/boost:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=eb3d3db6cbf83564b8ecca377c50dd20 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index ad7f51c1a70c..b68b6802db54 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -10,5 +10,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=741f3be1a17b816aabab39443236f37b diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index 6416ad6e0885..cc8bd7591b9e 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -10,5 +10,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 index 36d659745065..91c9f169e38b 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 @@ -10,5 +10,5 @@ LICENSE=AGPL-3 RDEPEND=sci-biology/libgtextutils:= dev-perl/PerlIO-gzip dev-perl/GDGraph sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=e0ed8e935eca944dc874fee38c4435ad diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 index 3c346c278c5a..73b03eb598a0 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=f2ef46b617dbd53a6e9dbdd86ff70bf1 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 index 1944c5a837ff..6f524d4f2b31 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.21-64bit-release.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=50de4ff6faf3b5ac3ed140d8e1653c23 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 920cf1f0c8a4..e8f096f8c487 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=a7e8ed9c8bc30ed68f4fc465709c2e3d diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index 06386173167f..ef402365a473 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=7e23482cbed8382298f1fb42831ae018 diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 index 56f3ff4cdc34..95e223518479 100644 --- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 +++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RESTRICT=!test? ( test ) SLOT=2 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=766670f9df1a2a937b1b58cf4c63931d diff --git a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 index 129760fdc13b..7df8e0a0522b 100644 --- a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 +++ b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) gsl? ( sci-libs/gsl:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=66609c69302596b8671531f5be5cf6c1 diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r2 b/metadata/md5-cache/sci-biology/iedera-1.05-r2 index 2a731498b0d4..4ead3fc42dc2 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r2 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=c1df71458cdeda01ad17b744ef31dc36 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index c7b7edcea8e7..3b452ee94d5d 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=ed6542a9fbe6d76d42075ee482329775 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index dd44b68c5438..909c3f2a42ae 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r4 b/metadata/md5-cache/sci-biology/lagan-2.0-r4 index 7a8ca55ed83d..922ce2a7ddaa 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r4 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r4 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=c4b4e347541c85d423cac28e03a104d4 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 index bd475f29767a..3e16f919119f 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=bf69c3370f31858d1ff072c30305ca99 diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490 index 799b07867994..c4cfd6301346 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.490 +++ b/metadata/md5-cache/sci-biology/mafft-7.490 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=04971be2bc4044a9c136d12a7e51b23d diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 index bdce420abf5c..f49e8e2ecd6d 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=063e8f4add19e5b685018dfb11be0196 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 index d2e2968f2302..b391c3dea077 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=ce6e22a8dca500f24263e27d73b9eda4 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 226c1eaacb24..2f72cf4e1f9a 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 53b26d74501d..034379560a05 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e vcs-snapshot eab6d8533446763c2e9777d8bbd1594e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b vcs-snapshot eab6d8533446763c2e9777d8bbd1594e _md5_=b275a0e18dbe85d2a2e24cebc796c134 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 858affaef03f..eefa665fbb81 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=4d1c6c16f8757994256f73d5be45cb8f diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 551ac16e4169..a7e0a94c8b98 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=90cf0e9cbae92852e8eb4b8ac547c951 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1 index 16a8a1a3d233..f1fba35577ab 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=7103f6fc8a8d965ba2e5b71b09010e1d diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 59ca107cc263..a28dccd2ca9a 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=https://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=62859cbc1404e079f9f85e83527914cf diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index 3e971b5c45b2..d618fa59c3d8 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r2 b/metadata/md5-cache/sci-biology/pals-1.0-r2 index 10f768abf565..44cc3f93f3b4 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=eacca1433c8023d7321f6b8d4fc4b6d4 diff --git a/metadata/md5-cache/sci-biology/paml-4.9j b/metadata/md5-cache/sci-biology/paml-4.9j index 3cb58bc29da5..ccc484da8c72 100644 --- a/metadata/md5-cache/sci-biology/paml-4.9j +++ b/metadata/md5-cache/sci-biology/paml-4.9j @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.9j.tgz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=236ce838eff8e04f8059e18110b3ff38 diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index 1aa0be4664a0..24b67b4239df 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -10,5 +10,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 index dd0415d69538..cea8c3454b10 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=07b5d0c4fa7ccf9c50fb8bba0dca57c7 diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r2 b/metadata/md5-cache/sci-biology/piler-1.0-r2 index cc199bbb2fed..cbf413c6dbfe 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r2 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r2 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=5fc094c7ed21adb9be841a3f8cf76801 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 index 21f9a4450ea3..e061f19c7952 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=00fbcbaccb202c9a3276728d356746a2 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index eb4fc9b84c3c..006dd2d14287 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=419587bbc06b4b3717534c9c0148238b diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 6b89faaecc0f..1f7e295d6922 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=903ecfa03b5ccff264e1b75f90e8b664 diff --git a/metadata/md5-cache/sci-biology/prank-140603-r1 b/metadata/md5-cache/sci-biology/prank-140603-r1 index 588d5d05cbc9..7356fd0ff140 100644 --- a/metadata/md5-cache/sci-biology/prank-140603-r1 +++ b/metadata/md5-cache/sci-biology/prank-140603-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=07f1836dd1c44c4ebf19bb6a59f7141a diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 index c22ac45f1fa9..65528915cb8c 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=7c332f2eee3108c0929cddfad29374e7 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index ee1ec94964e5..7977558e9a48 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=a0d3d7d9a640d31e0ece26e564b37dda diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 index fc3fdf500c60..583d82caddcd 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=fbd84f84d9eeda38c197893cf2c079c8 diff --git a/metadata/md5-cache/sci-biology/pysam-0.21.0 b/metadata/md5-cache/sci-biology/pysam-0.21.0 index bd46dd76b60c..619723e25309 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.21.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.21.0 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.21.0.tar.gz -> pysam-0.21.0.gh.tar.gz -_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=d2f337ee806641d85739cd55c8698806 diff --git a/metadata/md5-cache/sci-biology/pysam-9999 b/metadata/md5-cache/sci-biology/pysam-9999 index d49bc85fd408..99124ea3219f 100644 --- a/metadata/md5-cache/sci-biology/pysam-9999 +++ b/metadata/md5-cache/sci-biology/pysam-9999 @@ -12,5 +12,5 @@ RDEPEND=>=sci-libs/htslib-1.17 python_targets_python3_10? ( dev-lang/python:3.10 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=distutils-r1 b7cd5736a595ec0df9b164d5aec6f228 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 b3f874304c1bda6ffc3450ebb4ae5169 python-utils-r1 7661dc585f75dd1f81eccefe37bef093 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=bcdb07ed2c7ed322810daba181d02da3 diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index 8cc4c3011f71..c3299dfc7ae7 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index f82b3ebcb811..60472d5b4b63 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/recon-1.08-r1 b/metadata/md5-cache/sci-biology/recon-1.08-r1 index 2b4033b8aba2..77b8ca4d18b9 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08-r1 +++ b/metadata/md5-cache/sci-biology/recon-1.08-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=36772ec3438da03e296e39fc88b347ee diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 index cfdabed5e801..99e291349985 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=dd5336243d83138448c13acb7f4d4ba2 diff --git a/metadata/md5-cache/sci-biology/samtools-1.17 b/metadata/md5-cache/sci-biology/samtools-1.17 index 0b55b10a7d8b..10d0422519f4 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.17 +++ b/metadata/md5-cache/sci-biology/samtools-1.17 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.17*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib SLOT=0 SRC_URI=https://github.com/samtools/samtools/releases/download/1.17/samtools-1.17.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=d899fa7ac2ab4404dcca131cb83b93ab diff --git a/metadata/md5-cache/sci-biology/seaview-4.6-r1 b/metadata/md5-cache/sci-biology/seaview-4.6-r1 index dab9cd1c72bf..8338c82f7600 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6-r1 +++ b/metadata/md5-cache/sci-biology/seaview-4.6-r1 @@ -11,5 +11,5 @@ LICENSE=public-domain RDEPEND=sci-biology/clustalw:2 sci-biology/phyml || ( sci-libs/libmuscle sci-biology/muscle ) sys-libs/zlib x11-libs/fltk:1[xft?] x11-libs/libX11 xft? ( x11-libs/libXft ) SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=a742711d8523a4e49524662c12d647c2 diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index 589c112d60f3..c3acf3fb5fe1 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=327a33751512d78b13d5acd641ba3385 diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 38d24a09d2a1..e96719261bad 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=c9dc1d70a172b8258f2f0e4f3f7e967c diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index 5cd81a7d662b..f11ea397fda4 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index 43ccbdfcaaa3..9ccd276abd03 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=a98099ba2092ac37edaa2d1816ea88a1 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 index c51cf6393590..37c0b6ae8cad 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=4f19327a55b73328939540ced2179d21 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index f37febc09d00..0a0cda4fbcfa 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=5b3f19a3bd68515494075eab507798ef diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 74dabb1cd0ac..1cac102c9db2 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 _md5_=c7a6fb1f3ee6436d674328487c021a24 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 index a663e4a7726d..0b4be5e5c4ca 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl:= SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 index d2015ca4b089..869c2a6954ea 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake aa1d1fa7be37663d48162ac963b22692 flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=d6d5b7ba215fd8eaf51d3847f4051df6 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index da826c61b047..679676ec0f60 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack c61c368a76fdf3a82fdf8dbaebea3804 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic ad475baa777c9978fa035216c8264a10 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib c19072c3cd7ac5cb21de013f7e9832e0 preserve-libs 21162ec96c87041004a75348d97342dd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack c61c368a76fdf3a82fdf8dbaebea3804 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic ad475baa777c9978fa035216c8264a10 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib c19072c3cd7ac5cb21de013f7e9832e0 preserve-libs 21162ec96c87041004a75348d97342dd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index c7457b3abeb4..f3bea767750d 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -10,5 +10,5 @@ LICENSE=unafold RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=9559cbf8e26b94caa53077c0b5e2c89c diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index 413d54131369..85ce527d7222 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -11,5 +11,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 38b51d007617..5f358eb9bcde 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=f48eb0348a1ac91d41dde22d3ced2ea1 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 index 5e862e060de5..3a025f22b5d0 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=34f9a1f8b8f239e402200b9b5cb4f3cc diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r3 b/metadata/md5-cache/sci-biology/yass-1.14-r3 index 286f7ad1d421..8d44eb3ca4cc 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r3 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r3 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 8e3fb781f3258ae2757d1dfc2c7c170e +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 0c8a0b0d318eb5d5180d114bd3f6592b _md5_=9e0eb1b35801ce703a9a397be6421d47 |