diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
112 files changed, 111 insertions, 111 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 index 235d9c7f7bb7..210f27577dab 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 +++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 python_targ RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index dc0ff97963b0..d06b5ce0b7cf 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10( REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a git-r3 c57c50c922e121043788de0b40ada60a multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a git-r3 27e13c09a4c7e4c78ac812f74727e676 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex f4a826ab2a9e..5b4f83faada1 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/STAR-2.7.10a b/metadata/md5-cache/sci-biology/STAR-2.7.10a index 8a94c465a520..cc2eaedb11d1 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.7.10a +++ b/metadata/md5-cache/sci-biology/STAR-2.7.10a @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.7.10a.tar.gz -> STAR-2.7.10a.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=521aed057c81cfa841ab4b2dcf63e65b diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4 index 3ff461b11529..f93092fe3896 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.3.4 +++ b/metadata/md5-cache/sci-biology/abyss-2.3.4 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=9a708eff89b221551fbb0bcc299ccfa3 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r5 b/metadata/md5-cache/sci-biology/amap-2.2-r5 index 4327c0895fe8..3255c97ab751 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r5 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r5 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=java-ant-2 f9b70c3474c0b326c8102814719dc554 java-pkg-opt-2 4d26f2efd4c5ec82b66d1e8816f421b2 java-utils-2 eefed04ac580a259ecda1fbd966640b7 multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=java-ant-2 5a1b508f2544b7cac8ec27c170676de0 java-pkg-opt-2 4d26f2efd4c5ec82b66d1e8816f421b2 java-utils-2 8c72ea36a4935f626b13a30141d0d39c multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=b4e132581d5e91612a875f7f94387a1b diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index cec2960eb73e..aee41b44febc 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=80962b244c7531e320f35904727b5bd5 diff --git a/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 b/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 index 70a16059de18..845de65259cc 100644 --- a/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 +++ b/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 @@ -11,5 +11,5 @@ LICENSE=Artistic RDEPEND=dev-db/sqlite:3 dev-db/mysql++:= dev-db/mysql-connector-c:= dev-libs/boost:=[zlib] sci-biology/bamtools:= sci-biology/samtools:0 sci-libs/gsl:= sci-libs/htslib:= sci-libs/suitesparse sci-mathematics/lpsolve:= sys-libs/zlib SLOT=0 SRC_URI=https://github.com/Gaius-Augustus/Augustus/archive/refs/tags/v3.4.0.tar.gz -> augustus-3.4.0.tar.gz -_eclasses_=docs d8252aed4deb205674b4feefc1775bf3 multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=docs 7b9e167549c44efa7994614f33ba6d7a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=5af682d1467b7eddf54bfe603492b4fa diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index ec582433675a..447b85eb1bb9 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index ac0de700150e..92831b952d71 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -9,5 +9,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a git-r3 c57c50c922e121043788de0b40ada60a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a git-r3 27e13c09a4c7e4c78ac812f74727e676 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.16 b/metadata/md5-cache/sci-biology/bcftools-1.16 index f5876c3f1cec..2b03f0060335 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.16 +++ b/metadata/md5-cache/sci-biology/bcftools-1.16 @@ -12,5 +12,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_9? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_9 python_single_target_python3_10 python_single_target_python3_11 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.16/bcftools-1.16.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=5271780ace94107aae357a985f191e14 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 1d59cacf07d2..0225c9c55698 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 d2955aaac8daaaa69fcc6dc93ed19f29 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 d2955aaac8daaaa69fcc6dc93ed19f29 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=a8923ba46d6cb3a1840954c1b014568c diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index e4bae7162a00..9112af370f46 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -11,5 +11,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 index 5a3904e55d9b..53286f3da507 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=18fc653ace8feaf53e4d1c1818b7b00c diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index ee29d985110c..17261da3ceb5 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 ) RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=90f9103bd8f00cfb13d8821454edb4b8 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.4.1 b/metadata/md5-cache/sci-biology/biopandas-0.4.1 index e171f19a0197..ec1b1f7cda3a 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.4.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.4.1 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 python_targ RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/BioPandas/biopandas/archive/refs/tags/v0.4.1.tar.gz -> biopandas-0.4.1.gh.tar.gz -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=3b87692064234ef962aa52c8f93f9e17 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 index 0cb4d5bb332d..fbc4b4aaf85d 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 @@ -14,5 +14,5 @@ REQUIRED_USE=minimal? ( !graphviz ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=e2bc1ba3ce7d3071e3bfff1ff59b93fa diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 index 489558e5bbb2..2580349e2d1e 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=ec0bd67d52c316d61cf5adb758afcf04 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 index 0e3ff1cb0dfd..091ee31195db 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:= RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=062cfc681671741bdf0ce203cd9f0854 diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 index 93eb083086bd..85b4ce5bcee3 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module 8c55459fea879ccdec282839a3b22f78 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=89a50a53d48e4dddb7f36a35c0407fdb diff --git a/metadata/md5-cache/sci-biology/biopython-1.79 b/metadata/md5-cache/sci-biology/biopython-1.79 index fa30bb8b0577..4c0989a35d90 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.79 +++ b/metadata/md5-cache/sci-biology/biopython-1.79 @@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_9(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.79.tar.gz -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=6074a70b897177a12216367dcd1352a1 diff --git a/metadata/md5-cache/sci-biology/biopython-1.81 b/metadata/md5-cache/sci-biology/biopython-1.81 index b37f4333a394..9c9281319f1e 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.81 +++ b/metadata/md5-cache/sci-biology/biopython-1.81 @@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_9(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 ) SLOT=0 SRC_URI=https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.81.tar.gz -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi d083c45ce254373ad68562a43f4b9035 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 3b6a844fbf71f1581992b44c78b549b7 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=0633a971fcefdf1bd3b56330238719a8 diff --git a/metadata/md5-cache/sci-biology/blat-34-r3 b/metadata/md5-cache/sci-biology/blat-34-r3 index de277228d01f..d4246b670114 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r3 +++ b/metadata/md5-cache/sci-biology/blat-34-r3 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=5de19b6facdbdd7214fad082a7d27f77 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4 index 7934ffc1d878..3ea1f740144b 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.4.4 +++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4 @@ -12,5 +12,5 @@ RDEPEND=python_single_target_python3_9? ( >=dev-lang/python-3.9.16-r1:3.9 ) pyth REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_9 python_single_target_python3_10 ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=7e782380091eb080dc11ed573335cbf2 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.5.1 b/metadata/md5-cache/sci-biology/bowtie-2.5.1 index 23d29f7b121d..a88afe9df049 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.5.1 +++ b/metadata/md5-cache/sci-biology/bowtie-2.5.1 @@ -13,5 +13,5 @@ REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_9 python_singl RESTRICT=test SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.5.1/bowtie2-2.5.1-source.zip -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=831933c38b43e507442ee567a3c3583f diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index 4333aa01647a..c1ca94839f95 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=620c3569e8293303737f7844385c7e82 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 index 02262eaa176d..c2a39b1e111c 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=72c254d2d4b43c49ff9b0ddcde699acb diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 index 61c665b9d977..f9c5b8c27220 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=1fe31c7bf68a0e3d5cd862d476a40e5b diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 39e0b13f9ea1..2af522834170 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-so LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=ddae5c7662955525ce9e2a946d0d953c diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 index cd6d839bec83..b8a75144462c 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 @@ -10,5 +10,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=689841db0e3b7d6629b51049a2942165 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index 2f7c6a3d4673..8808ef7cffd3 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib 5ca4e49abed8e3a2f7b56920eadee157 qmake-utils 59420c906278d16deaaa629f9d115707 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib d1408425c7c4a7669b9b17735404b693 qmake-utils 59420c906278d16deaaa629f9d115707 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=3f60f1952758458fc3cd4e2789a942f5 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index bf44d4a9bab8..8331e0a20bfa 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=b2a78c4cfa60eb348ae63d076ecb5fba diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 index 65deb9613286..fb9afd9c4296 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=879353dc71e4dca1cd8026068a0c808c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r2 b/metadata/md5-cache/sci-biology/elph-1.0.1-r2 index 534a51a2e0ce..c6645fd31b9b 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r2 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=12ec147b7c0b74b6a61b6fb56542afb5 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index 01b5a1ef4d1f..c96101e6a4fc 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index 92e6b355b3cd..ade14e546214 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index 41e1f9020541..b9dbf2a6a577 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index 914683186849..833a0c96003b 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index cac67c6d586e..c8df19634042 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index c0a1d03ba161..9e36da7bc0c5 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index 137b5ae011de..122ecf7b406f 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=95026ca22c2bacedf52a70b4428e7753 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index 23d3c71a2796..eb909566040d 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index b48e42631161..4dbe11299083 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index 7a01a96828e4..ffa6dfb8fb33 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=b6d66fbfe89f6c64f635551357dc90f4 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index c747a23afd87..0fb74f3d6910 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=93c762366f9cfe8fbfdffd0fdc0483d5 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index 2059aa5fef09..65b2ab875ff0 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index edc9f46faa93..e331a92da21d 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index 7fe5f0a5f99d..d23ca1eb6959 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index 196eab98acd6..5a9d92276e6e 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 index e945d6481b39..94a972d46f2c 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 @@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=autotools b5529dc611971a61a30153916014f616 emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=9856dbbe227d34ba8fd5a46c30dc912f diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 index fb9d11b52c0b..30fac2d7cd3b 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 @@ -11,5 +11,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=8b37e07736e31e675410189d0ff61791 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 index b67e1c2f770b..378d86d7d436 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 @@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=4bd132dac9c502e76b3000e9c6d1e897 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 2649a10a82d5..172809445099 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -10,5 +10,5 @@ LICENSE=Artistic RDEPEND=dev-libs/boost:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=eb3d3db6cbf83564b8ecca377c50dd20 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index d0292c797c88..461505226272 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -10,5 +10,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=741f3be1a17b816aabab39443236f37b diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index addeec801c62..3cceebde0e93 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -10,5 +10,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 index bee55bfeebda..334103fa0789 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 @@ -10,5 +10,5 @@ LICENSE=AGPL-3 RDEPEND=sci-biology/libgtextutils:= dev-perl/PerlIO-gzip dev-perl/GDGraph sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=e0ed8e935eca944dc874fee38c4435ad diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 index 2761b3dc0b7b..57f3f3723ab5 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=f2ef46b617dbd53a6e9dbdd86ff70bf1 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 index 63b74c5fd3ac..c7acae53269c 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.21-64bit-release.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=50de4ff6faf3b5ac3ed140d8e1653c23 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index ec57b6872b6a..164e6bc96776 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=a7e8ed9c8bc30ed68f4fc465709c2e3d diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index 0994e8d87ec8..bc5227afdfe3 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=9fc33629a982f35b93c18da772894fdd diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 index 1260b8a7b521..c800319c8d7f 100644 --- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 +++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RESTRICT=!test? ( test ) SLOT=2 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=766670f9df1a2a937b1b58cf4c63931d diff --git a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 index 47f11406d874..5b753dec2acb 100644 --- a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 +++ b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) gsl? ( sci-libs/gsl:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=66609c69302596b8671531f5be5cf6c1 diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r2 b/metadata/md5-cache/sci-biology/iedera-1.05-r2 index 8e684f812802..fa7dcdb90b84 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r2 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=c1df71458cdeda01ad17b744ef31dc36 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index d7e7b3de3647..436f8bc94cea 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=a3b1f788e8f5b38e41b3a9e38f91fe88 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index cb09389cffe7..1678ff53638c 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r4 b/metadata/md5-cache/sci-biology/lagan-2.0-r4 index fb03186fcc3b..56583dc681e8 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r4 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r4 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=c4b4e347541c85d423cac28e03a104d4 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 index 5437e626f640..8a0a8e2aa404 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=bf69c3370f31858d1ff072c30305ca99 diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490 index e55a69e7a1b9..e1e3b89109ee 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.490 +++ b/metadata/md5-cache/sci-biology/mafft-7.490 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=04971be2bc4044a9c136d12a7e51b23d diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 index 1a57bca8a816..260568298b7e 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=063e8f4add19e5b685018dfb11be0196 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 index d9fad63507ca..b939803f1d8c 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=ce6e22a8dca500f24263e27d73b9eda4 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index f1d1025eb20a..b7b393815a28 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index f82af35cbf69..ede44bf835a1 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b vcs-snapshot eab6d8533446763c2e9777d8bbd1594e wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e vcs-snapshot eab6d8533446763c2e9777d8bbd1594e wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=b275a0e18dbe85d2a2e24cebc796c134 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index b94baf10c09c..fa3845b769b8 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a fortran-2 7eb0cd2524143c5f3298ba4bcc95391b multilib 5ca4e49abed8e3a2f7b56920eadee157 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib d1408425c7c4a7669b9b17735404b693 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=2a931ea6d0536a0cb3441d235f5d2d6b diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index b8ab561c5b99..f02373ceae6f 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=5905565f0c29b3c7b9098cfb7a50e760 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1 index 35c2edaacec2..c839881c421f 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=7103f6fc8a8d965ba2e5b71b09010e1d diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 0a0b3af255ec..ab8fbec16b18 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=https://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=373aea64d7c96030dbc1a9c4404f3985 diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index 287a29744c3d..acf5d4665c4c 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r2 b/metadata/md5-cache/sci-biology/pals-1.0-r2 index 939af8d63f2d..b0e3f84ee80f 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=03270366228400ac56642b59fb067532 diff --git a/metadata/md5-cache/sci-biology/paml-4.9j b/metadata/md5-cache/sci-biology/paml-4.9j index aff44b3f631b..b7baea7044e7 100644 --- a/metadata/md5-cache/sci-biology/paml-4.9j +++ b/metadata/md5-cache/sci-biology/paml-4.9j @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.9j.tgz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=236ce838eff8e04f8059e18110b3ff38 diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index 924b1157b5fc..6acf2efff838 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -10,5 +10,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 index a09afe017ce6..9bc93db3d93c 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=d7f38a7c0005dca5f3da1d1fbd9780ae diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r2 b/metadata/md5-cache/sci-biology/piler-1.0-r2 index 07e8cdb21e6c..e0a315a76284 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r2 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r2 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=5a8dffca1e2b80e93cf1efdff5fd3fd0 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 index bac86513bb85..ba40114aa9eb 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=d6fca147863ed9ae98f77d0b6f762060 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 9043ed3b3c6f..4ae310c2c434 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=419587bbc06b4b3717534c9c0148238b diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index a90a8571e5a4..1fb5dceaf729 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=903ecfa03b5ccff264e1b75f90e8b664 diff --git a/metadata/md5-cache/sci-biology/prank-140603-r1 b/metadata/md5-cache/sci-biology/prank-140603-r1 index a74dc7d71d02..e2ae7ad765fa 100644 --- a/metadata/md5-cache/sci-biology/prank-140603-r1 +++ b/metadata/md5-cache/sci-biology/prank-140603-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=07f1836dd1c44c4ebf19bb6a59f7141a diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 index 1fe6477d9622..3fbcc358af71 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=f0e187a7011db2129b8874b8bf3e3496 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 175189a2474e..faf38ee8eade 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=0f60285a7f7c2929aed4404425c3fc40 diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 index 1be1f9df1409..a329c1f703e2 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=fbd84f84d9eeda38c197893cf2c079c8 diff --git a/metadata/md5-cache/sci-biology/pysam-0.20.0 b/metadata/md5-cache/sci-biology/pysam-0.20.0 index 1182301934c7..d4f4b167369c 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.20.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.20.0 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 python_targ RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.20.0.tar.gz -> pysam-0.20.0.gh.tar.gz -_eclasses_=distutils-r1 ad4c1e4ec8737eb363aacd638f6a513b multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=distutils-r1 761304ceeb845986696f9a65cf4b6f01 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 429bfd4e8d8e39db5385ba5744f30788 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=82d5f0e85825a15553dc3ea698455b1d diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index 323298288acd..2cf013b3e964 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 5c81938d9055..b229ed156262 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/recon-1.08-r1 b/metadata/md5-cache/sci-biology/recon-1.08-r1 index f95943422c8e..9e9eec491dba 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08-r1 +++ b/metadata/md5-cache/sci-biology/recon-1.08-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=36772ec3438da03e296e39fc88b347ee diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 index 00f2743e2321..1bc50048db7b 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=dd5336243d83138448c13acb7f4d4ba2 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 index f0110d86da84..5ff05459df61 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=sys-libs/ncurses:0= dev-lang/perl SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=89941c8b8d527ccc386063a3f533ef77 diff --git a/metadata/md5-cache/sci-biology/samtools-1.16.1 b/metadata/md5-cache/sci-biology/samtools-1.16.1 index 3840fe434e02..c13aec99ca4d 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.16.1 +++ b/metadata/md5-cache/sci-biology/samtools-1.16.1 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.16*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib SLOT=0 SRC_URI=https://github.com/samtools/samtools/releases/download/1.16.1/samtools-1.16.1.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=b8e35bdd6557538de4b0e9d3b6c9295c diff --git a/metadata/md5-cache/sci-biology/seaview-4.6-r1 b/metadata/md5-cache/sci-biology/seaview-4.6-r1 index 732a624cfe01..786353441958 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6-r1 +++ b/metadata/md5-cache/sci-biology/seaview-4.6-r1 @@ -11,5 +11,5 @@ LICENSE=public-domain RDEPEND=sci-biology/clustalw:2 sci-biology/phyml || ( sci-libs/libmuscle sci-biology/muscle ) sys-libs/zlib x11-libs/fltk:1[xft?] x11-libs/libX11 xft? ( x11-libs/libXft ) SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=a742711d8523a4e49524662c12d647c2 diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index 2bab13c1ca01..945cf50b5296 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=327a33751512d78b13d5acd641ba3385 diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 251678ab033c..afa372ad1500 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=da65f25e1cebcf8c22efbffb6b2b5c95 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index b1182a4f07c4..d341357955b7 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index 3cea95330225..0f0da9e8abac 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=2503d6480cd2b0d2f44e2b3ffe5c4eb1 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 index d77cc5e383be..1a1cedc7364b 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=4f19327a55b73328939540ced2179d21 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index 495d54c0b2bb..f3b5c10f7c65 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=1ab88737aae8e6c93a46631cd7d1bdd9 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 4c4d1b7e9b51..df72315fa499 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b wrapper 4a1902f969e5718126434fc35f3a0d9c wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e wrapper 4a1902f969e5718126434fc35f3a0d9c wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 _md5_=c86f5cda4344605df8072acf1799776b diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 index af669b058d44..a8c5daaa926d 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl:= SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 index d2588da366fc..02dce7e0395b 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake 2e47edc2986d4e1c0363867058cd4489 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 38c85b725d0467e51954ea921b6c104b toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b xdg-utils ac0e315a3688929e34ac75b139e7349a +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=75e1e97ed1a0b22c90eebd09f4e46d59 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index e6d5b95992fc..cd46262be8e5 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 447396341f5f896d722e435a06f87a4f eqawarn c9847c43b3253a276ae2eabddedab3d7 estack 055c42df72f76a4f45ec92b35e83cd56 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib 5ca4e49abed8e3a2f7b56920eadee157 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp ad783226c3d38ede384db5643af60dbd wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack 055c42df72f76a4f45ec92b35e83cd56 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib d1408425c7c4a7669b9b17735404b693 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 5754038a4264..2cb7014075cc 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -10,5 +10,5 @@ LICENSE=unafold RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=9559cbf8e26b94caa53077c0b5e2c89c diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index 7d58bf6ded5d..8b1b000e3738 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -11,5 +11,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 3c909110bfe9..1cd496dd7525 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=flag-o-matic 514815b1cc0dd4aeac177c2e812b3b1a multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=f48eb0348a1ac91d41dde22d3ced2ea1 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 index 55feb74a5437..70f6f9a3eaf6 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=34f9a1f8b8f239e402200b9b5cb4f3cc diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r3 b/metadata/md5-cache/sci-biology/yass-1.14-r3 index ee9be336b646..4c660226dff9 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r3 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r3 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools b5529dc611971a61a30153916014f616 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib 5ca4e49abed8e3a2f7b56920eadee157 toolchain-funcs 6001248ef162a5fa2a21ce132a212f6b +_eclasses_=autotools f0d3196128225dee3220e65f3371bc7a gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib d1408425c7c4a7669b9b17735404b693 toolchain-funcs 14a8ae365191b518fad51caad7a08f3e _md5_=9e0eb1b35801ce703a9a397be6421d47 |