diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
111 files changed, 110 insertions, 110 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 index 49784218823f..7c4fbbba37ad 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 +++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz -_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index c08d359e841f..fd29f9504c3d 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_10(-)?,python_targets_python3_11 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex 54886a1e849d..0d4695e7c9bd 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/STAR-2.7.10a b/metadata/md5-cache/sci-biology/STAR-2.7.10a index 462865d0df8b..0ae7753b86bd 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.7.10a +++ b/metadata/md5-cache/sci-biology/STAR-2.7.10a @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.7.10a.tar.gz -> STAR-2.7.10a.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=521aed057c81cfa841ab4b2dcf63e65b diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4 index c5b607de9101..dfdb7bdb7445 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.3.4 +++ b/metadata/md5-cache/sci-biology/abyss-2.3.4 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=9a708eff89b221551fbb0bcc299ccfa3 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r5 b/metadata/md5-cache/sci-biology/amap-2.2-r5 index b29b0a237ed5..8cdc3b821da2 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r5 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r5 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=java-ant-2 19239227fab7816f57abbc0c7d819396 java-pkg-opt-2 3816f3fc28ed2b067845e2802eb954b2 java-utils-2 d051ecd608488854eb9252d64d396140 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=java-ant-2 19239227fab7816f57abbc0c7d819396 java-pkg-opt-2 3816f3fc28ed2b067845e2802eb954b2 java-utils-2 d051ecd608488854eb9252d64d396140 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=b4e132581d5e91612a875f7f94387a1b diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index c6101001fd9d..4dd98e044432 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=4c500e601e76f119e63d2dc13321648c diff --git a/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 b/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 index 496ac2ee991d..6910243f5814 100644 --- a/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 +++ b/metadata/md5-cache/sci-biology/augustus-3.4.0-r3 @@ -11,5 +11,5 @@ LICENSE=Artistic RDEPEND=dev-db/sqlite:3 dev-db/mysql++:= dev-db/mysql-connector-c:= dev-libs/boost:=[zlib] sci-biology/bamtools:= sci-biology/samtools:0 sci-libs/gsl:= sci-libs/htslib:= sci-libs/suitesparse sci-mathematics/lpsolve:= sys-libs/zlib SLOT=0 SRC_URI=https://github.com/Gaius-Augustus/Augustus/archive/refs/tags/v3.4.0.tar.gz -> augustus-3.4.0.tar.gz -_eclasses_=docs 74475974eae5130ba3e19b31b8ae46b8 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=docs 74475974eae5130ba3e19b31b8ae46b8 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=5af682d1467b7eddf54bfe603492b4fa diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index d21092f29205..f3b0a6c20f5c 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 81a50b172f75..39bc8aa648d7 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -9,5 +9,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 git-r3 2358a7b20091609e24bd3a83b3ac5991 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 git-r3 2358a7b20091609e24bd3a83b3ac5991 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.17 b/metadata/md5-cache/sci-biology/bcftools-1.17 index b60e612f5846..31812a093193 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.17 +++ b/metadata/md5-cache/sci-biology/bcftools-1.17 @@ -12,5 +12,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_10? ( dev-python/matplotlib[p REQUIRED_USE=^^ ( python_single_target_python3_10 python_single_target_python3_11 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.17/bcftools-1.17.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=5271780ace94107aae357a985f191e14 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 1910aa1ac59a..f314acde5da1 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 f5169813d1619761b459800587005fd2 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-any-r1 f5169813d1619761b459800587005fd2 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=6362b2cc40163766b0448cea57894c3a diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 792ef118dfa9..db5561a4597d 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -11,5 +11,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 index 1e3b9dde300b..806b84cf0d4c 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r3 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r3 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=18fc653ace8feaf53e4d1c1818b7b00c diff --git a/metadata/md5-cache/sci-biology/biopandas-0.4.1 b/metadata/md5-cache/sci-biology/biopandas-0.4.1 index 3dffbaa70731..2e7f09f7b6d3 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.4.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.4.1 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/BioPandas/biopandas/archive/refs/tags/v0.4.1.tar.gz -> biopandas-0.4.1.gh.tar.gz -_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=3b87692064234ef962aa52c8f93f9e17 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 index d167058207f7..8873930e6fbe 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 @@ -14,5 +14,5 @@ REQUIRED_USE=minimal? ( !graphviz ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=275c67756e8440c392c02c29c75e1388 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 index cf396124abe0..2eb445d4c235 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r2 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=56259564f94ae015e0cdd27bc2db8b21 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 index 11eb94e00507..89b33976beb2 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:= RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=6c074e2b53c3e7242c6ed1e352537670 diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 index 6cb2c3842a3d..db05df9a85c7 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 @@ -12,5 +12,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 perl-functions c3fca037246e877693badea0df3b0ef8 perl-module aa997145fb9941f14e9be1c3ed7238b8 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=517668f69988f82c6a81d26d36633342 diff --git a/metadata/md5-cache/sci-biology/biopython-1.81-r1 b/metadata/md5-cache/sci-biology/biopython-1.81-r1 index 24faa35cfd1e..5eba5f359390 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.81-r1 +++ b/metadata/md5-cache/sci-biology/biopython-1.81-r1 @@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_10(-)?,python_targets_pytho REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) SLOT=0 SRC_URI=https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.81.tar.gz -_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 2eecb475512bc76e5ea9192a681b9e6b python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 2eecb475512bc76e5ea9192a681b9e6b python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=8a03119f9fac05f570005f3d1be8aa57 diff --git a/metadata/md5-cache/sci-biology/blat-34-r3 b/metadata/md5-cache/sci-biology/blat-34-r3 index 0ecfe64dc1e4..506ea1c45314 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r3 +++ b/metadata/md5-cache/sci-biology/blat-34-r3 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=5de19b6facdbdd7214fad082a7d27f77 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4 index 6a741753e3a8..c1ddec140aa0 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.4.4 +++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4 @@ -12,5 +12,5 @@ RDEPEND=python_single_target_python3_10? ( dev-lang/python:3.10 ) dev-lang/perl REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_10 ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=7e782380091eb080dc11ed573335cbf2 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.5.1 b/metadata/md5-cache/sci-biology/bowtie-2.5.1 index 72bd111d8a37..d0ede6170aa0 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.5.1 +++ b/metadata/md5-cache/sci-biology/bowtie-2.5.1 @@ -13,5 +13,5 @@ REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_10 python_sing RESTRICT=test SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.5.1/bowtie2-2.5.1-source.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 python-single-r1 75118e916668a74c660a13b0ecb22562 python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=831933c38b43e507442ee567a3c3583f diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index 4ecdccbf973c..ddfd5fac4768 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=620c3569e8293303737f7844385c7e82 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 index 256efced96bf..77b1a627687d 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=72c254d2d4b43c49ff9b0ddcde699acb diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 index 84c100f8e8b2..42c9b21ce821 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=e2928c88a8676586ff3c5e4a7f534608 diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 8e5ac2f7f0d7..adc4bb7b37dd 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc ppc64 sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=48325a27354b2683cb1b693a641b7ab7 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 index cd25a915fb8c..4398f2d216d1 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 @@ -10,5 +10,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=689841db0e3b7d6629b51049a2942165 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index 71918c4228da..e942a0a22aa6 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 qmake-utils a8dd17b1d94586164f5e3fc12b1c6b81 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 qmake-utils a8dd17b1d94586164f5e3fc12b1c6b81 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=26ebb7c606a394252d2be9f3c156984f diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index 03891ea1a9c6..9379b84e4820 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=b2a78c4cfa60eb348ae63d076ecb5fba diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 index 32426b930228..6b0f70a4a24a 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=879353dc71e4dca1cd8026068a0c808c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r3 b/metadata/md5-cache/sci-biology/elph-1.0.1-r3 index b7e2d1d056c7..a465362b5409 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r3 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r3 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=33ffc2d8f7374d9619cfcb1838da0680 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index f213b83491c4..da0e3c895783 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index 7a514b5fe2d3..bc70e28d1597 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index 8f4b3e49719d..7d98e317b83a 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index d5b6f1d1eb73..feaf619c649e 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index e6ad6d725932..c2504ffc5391 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index 428283107055..189ddceea0e6 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index c75819645277..6e1a4805b4b3 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=95026ca22c2bacedf52a70b4428e7753 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index 4312c268ae52..6abd9b8414ad 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index 96d14809776a..28c16fcd8fd7 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index 9f464ce54326..e2bdbfc31eed 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=b6d66fbfe89f6c64f635551357dc90f4 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index 2cfe3c488621..4071699fab74 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=93c762366f9cfe8fbfdffd0fdc0483d5 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index 0db8c192bab7..78cc404dd350 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index bab11eea7616..c917b1e87c4c 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index bc5af12bba5b..2c5a72b285f2 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index 043f6f860138..ae08e128e6f4 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 index dfb6e026688b..9938f45432c8 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 @@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=9856dbbe227d34ba8fd5a46c30dc912f diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 index 5bb658bf0ee3..7e1a98f0fc23 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d-r1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1d-r1 @@ -11,5 +11,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=88a096386941104cea7615974ecef526 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 index 4a5a31e8a461..24581d18556b 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 @@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=4bd132dac9c502e76b3000e9c6d1e897 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 288b78f1c11b..3e40b82e98ec 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -10,5 +10,5 @@ LICENSE=Artistic RDEPEND=dev-libs/boost:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=eb3d3db6cbf83564b8ecca377c50dd20 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index 0323df7f97bb..93c0fb4bb253 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -10,5 +10,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=741f3be1a17b816aabab39443236f37b diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index 4758643226bd..14af453424dc 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -10,5 +10,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 index 503aa053f59f..e808a724194d 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14-r1 @@ -10,5 +10,5 @@ LICENSE=AGPL-3 RDEPEND=sci-biology/libgtextutils:= dev-perl/PerlIO-gzip dev-perl/GDGraph sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=e0ed8e935eca944dc874fee38c4435ad diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 index 2fd0ee885683..8a3e74b4f8aa 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=f2ef46b617dbd53a6e9dbdd86ff70bf1 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 index 823454d7b13c..0e1bca0c457e 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.21 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.21 @@ -11,5 +11,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.21-64bit-release.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 systemd 5f4bb0758df2e483babf68cd517078ca toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=50de4ff6faf3b5ac3ed140d8e1653c23 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 52e4340159a4..3c2a365c64c6 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=a7e8ed9c8bc30ed68f4fc465709c2e3d diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index cf8692c6aaab..ebd24ead58d9 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=7e23482cbed8382298f1fb42831ae018 diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 index da91dd07c05d..87d19da5706f 100644 --- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 +++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RESTRICT=!test? ( test ) SLOT=2 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=766670f9df1a2a937b1b58cf4c63931d diff --git a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 index 5f869fe28a60..b40879edbd8d 100644 --- a/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 +++ b/metadata/md5-cache/sci-biology/hmmer-3.1_beta2-r1 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) gsl? ( sci-libs/gsl:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=66609c69302596b8671531f5be5cf6c1 diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r2 b/metadata/md5-cache/sci-biology/iedera-1.05-r2 index 47dc50c86c5a..faed612e7196 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r2 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=c1df71458cdeda01ad17b744ef31dc36 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index 1297b0f48438..9250d5c473b3 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=ed6542a9fbe6d76d42075ee482329775 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index a54799c6b740..0ddb7b81e29b 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r4 b/metadata/md5-cache/sci-biology/lagan-2.0-r4 index 7fc896bb0591..0e1dbb298561 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r4 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r4 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=c4b4e347541c85d423cac28e03a104d4 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 index 285fe2642039..553ecadcc8d7 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=bf69c3370f31858d1ff072c30305ca99 diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490 index 1e3541444413..154383f0cc6a 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.490 +++ b/metadata/md5-cache/sci-biology/mafft-7.490 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=04971be2bc4044a9c136d12a7e51b23d diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 index 6c843953a6d1..20d757723a97 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r3 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=063e8f4add19e5b685018dfb11be0196 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 index e57aba1bd467..13729e9b99ef 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r4 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=ce6e22a8dca500f24263e27d73b9eda4 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 29dc165269ad..5db51acfa668 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 149d8434f737..5642bca5bb8e 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca vcs-snapshot eab6d8533446763c2e9777d8bbd1594e +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc vcs-snapshot eab6d8533446763c2e9777d8bbd1594e _md5_=b275a0e18dbe85d2a2e24cebc796c134 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index c42ac0f15035..b845e3b7e380 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=4d1c6c16f8757994256f73d5be45cb8f diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 78ff0f9e4d9f..d939b5bc6ce2 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=90cf0e9cbae92852e8eb4b8ac547c951 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1 index fec5135ebeb2..60af20bd689f 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=7103f6fc8a8d965ba2e5b71b09010e1d diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 9eea6f397de4..be0d177fb46e 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=https://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=62859cbc1404e079f9f85e83527914cf diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index e061cfcdbffd..59303b6f3137 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r2 b/metadata/md5-cache/sci-biology/pals-1.0-r2 index 48d6e5960ab5..6d087dc6101a 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=eacca1433c8023d7321f6b8d4fc4b6d4 diff --git a/metadata/md5-cache/sci-biology/paml-4.9j b/metadata/md5-cache/sci-biology/paml-4.9j index ea9d65c0e277..a0879f6e0761 100644 --- a/metadata/md5-cache/sci-biology/paml-4.9j +++ b/metadata/md5-cache/sci-biology/paml-4.9j @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.9j.tgz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=236ce838eff8e04f8059e18110b3ff38 diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index b7af9986ad1b..6de9ac89154c 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -10,5 +10,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 index f9cdfb49028c..a148bbe36720 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r4 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=07b5d0c4fa7ccf9c50fb8bba0dca57c7 diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r2 b/metadata/md5-cache/sci-biology/piler-1.0-r2 index e2719a83c5a2..df3a33745115 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r2 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r2 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=5fc094c7ed21adb9be841a3f8cf76801 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 index 96ad0a8285c5..177a12e9919c 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r2 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r2 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=00fbcbaccb202c9a3276728d356746a2 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r3 b/metadata/md5-cache/sci-biology/pilercr-1.0-r3 index 4d448010d41b..cf1c38565ee7 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r3 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r3 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=a4758999cbdb4e27100e24cb54470db8 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index b0c576bd9616..5560a30fc4c9 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=419587bbc06b4b3717534c9c0148238b diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 301569b3d660..a45af3e426d8 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=903ecfa03b5ccff264e1b75f90e8b664 diff --git a/metadata/md5-cache/sci-biology/prank-140603-r1 b/metadata/md5-cache/sci-biology/prank-140603-r1 index ec5e0f87a527..f92811101563 100644 --- a/metadata/md5-cache/sci-biology/prank-140603-r1 +++ b/metadata/md5-cache/sci-biology/prank-140603-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=07f1836dd1c44c4ebf19bb6a59f7141a diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 index 2c9517331f31..dfc818cd84b5 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=7c332f2eee3108c0929cddfad29374e7 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 0ef107378f40..a85da4cf9276 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=a0d3d7d9a640d31e0ece26e564b37dda diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 index e6d096499916..1b4267b03193 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=fbd84f84d9eeda38c197893cf2c079c8 diff --git a/metadata/md5-cache/sci-biology/pysam-0.21.0 b/metadata/md5-cache/sci-biology/pysam-0.21.0 index c528ad4a4fff..c9654ae31f7d 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.21.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.21.0 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.21.0.tar.gz -> pysam-0.21.0.gh.tar.gz -_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=d2f337ee806641d85739cd55c8698806 diff --git a/metadata/md5-cache/sci-biology/pysam-9999 b/metadata/md5-cache/sci-biology/pysam-9999 index c62145c1f3d1..0efa2a3bd651 100644 --- a/metadata/md5-cache/sci-biology/pysam-9999 +++ b/metadata/md5-cache/sci-biology/pysam-9999 @@ -12,5 +12,5 @@ RDEPEND=>=sci-libs/htslib-1.17 python_targets_python3_10? ( dev-lang/python:3.10 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=distutils-r1 24344aec2be39c69d9f279b5415298ce flag-o-matic be27a904c614cb93ae037762dc69bcc2 git-r3 2358a7b20091609e24bd3a83b3ac5991 multibuild 30dbf3c5a31db09a19f31ad0a68f2405 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 12aa0037eb004139215ff04894d52b28 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=bcdb07ed2c7ed322810daba181d02da3 diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index 793a4bb551b8..920d75b5bca4 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 53542cd46407..57700cbb909a 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/recon-1.08-r1 b/metadata/md5-cache/sci-biology/recon-1.08-r1 index 120fbc2c6fd7..d4759bf3ac9f 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08-r1 +++ b/metadata/md5-cache/sci-biology/recon-1.08-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=36772ec3438da03e296e39fc88b347ee diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 index 9fbf8e429b6c..450bb99f169c 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r5 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r5 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=dd5336243d83138448c13acb7f4d4ba2 diff --git a/metadata/md5-cache/sci-biology/samtools-1.17 b/metadata/md5-cache/sci-biology/samtools-1.17 index abc8476c11ea..eba32f071fc5 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.17 +++ b/metadata/md5-cache/sci-biology/samtools-1.17 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.17*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib SLOT=0 SRC_URI=https://github.com/samtools/samtools/releases/download/1.17/samtools-1.17.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=d899fa7ac2ab4404dcca131cb83b93ab diff --git a/metadata/md5-cache/sci-biology/seaview-4.6-r1 b/metadata/md5-cache/sci-biology/seaview-4.6-r1 index dfdcf1aa3dd6..d37a9a15efd9 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6-r1 +++ b/metadata/md5-cache/sci-biology/seaview-4.6-r1 @@ -11,5 +11,5 @@ LICENSE=public-domain RDEPEND=sci-biology/clustalw:2 sci-biology/phyml || ( sci-libs/libmuscle sci-biology/muscle ) sys-libs/zlib x11-libs/fltk:1[xft?] x11-libs/libX11 xft? ( x11-libs/libXft ) SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=a742711d8523a4e49524662c12d647c2 diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index 47b11c5286e8..87e7ef143da8 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=327a33751512d78b13d5acd641ba3385 diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 51eb08a3fc02..39e33374fe8c 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=c9dc1d70a172b8258f2f0e4f3f7e967c diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index a38ef4141195..5be6a28c6927 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index cc6f0c8c470d..94ed84bd6ec6 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=a98099ba2092ac37edaa2d1816ea88a1 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 index ba221c0688f5..236661522a86 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=4f19327a55b73328939540ced2179d21 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index c179592e744a..a7449090723f 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -12,5 +12,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=5b3f19a3bd68515494075eab507798ef diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index f42dafba1273..70b51ad712fd 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 _md5_=c7a6fb1f3ee6436d674328487c021a24 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 index e79979a2b162..e498b47d06b9 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl:= SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 index f26ee9101512..044e6b5699f0 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs 862d337d98edb576796827be2c6b11ca xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake fc2f89084f590ac95c004ea95b0d2f80 flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils f3010c780f65d1bb5aea15a9af1adc9c toolchain-funcs fbbbc99d10168de2926e06da7169b8dc xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=d6d5b7ba215fd8eaf51d3847f4051df6 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index 62060fef2e25..fd063d4d8ed8 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack c61c368a76fdf3a82fdf8dbaebea3804 eutils d318efeb438bbec051fa5aaf28d0d42c flag-o-matic be27a904c614cb93ae037762dc69bcc2 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib c19072c3cd7ac5cb21de013f7e9832e0 preserve-libs 21162ec96c87041004a75348d97342dd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 862d337d98edb576796827be2c6b11ca vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack c61c368a76fdf3a82fdf8dbaebea3804 eutils d318efeb438bbec051fa5aaf28d0d42c flag-o-matic be27a904c614cb93ae037762dc69bcc2 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib c19072c3cd7ac5cb21de013f7e9832e0 preserve-libs 21162ec96c87041004a75348d97342dd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index f3da06363b1c..3b7f8244662a 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -10,5 +10,5 @@ LICENSE=unafold RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=9559cbf8e26b94caa53077c0b5e2c89c diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index ea1c4fc4370a..1e0944e9e8aa 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -11,5 +11,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic be27a904c614cb93ae037762dc69bcc2 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index fee34c59eb64..08fcc7d930ab 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=flag-o-matic be27a904c614cb93ae037762dc69bcc2 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=f48eb0348a1ac91d41dde22d3ced2ea1 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 index ac794e55b880..b64cc860998f 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=34f9a1f8b8f239e402200b9b5cb4f3cc diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r3 b/metadata/md5-cache/sci-biology/yass-1.14-r3 index ce1c656b7f5e..40c61601e926 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r3 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r3 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 862d337d98edb576796827be2c6b11ca +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs fbbbc99d10168de2926e06da7169b8dc _md5_=9e0eb1b35801ce703a9a397be6421d47 |