diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
141 files changed, 145 insertions, 188 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index 0e46aa5adfd6..380d8f902c08 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/tcl:0 dev-lang/tk:0 RESTRICT=bindist mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ca6aef807b65b2b092f7e1ff4ebbe5e2 diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index 0f6d61d4463b..00447a4e6b11 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15 SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bccaeef3292f6df307fc14fb5a2a74b2 diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 index 5c48f1aea976..a7a77f0fb741 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 @@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(- REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz -_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=ed6a76d098be1d996f372cc4a1949747 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index 5b3402bf84ec..de831bd9df52 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -10,5 +10,5 @@ PROPERTIES=live RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 ) SLOT=0 -_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c git-r3 3e7ec3d6619213460c85e2aa48398441 multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c git-r3 3e7ec3d6619213460c85e2aa48398441 multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=ed6a76d098be1d996f372cc4a1949747 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex 5f1f919514a4..2ef3191944b6 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/STAR-2.5.3a b/metadata/md5-cache/sci-biology/STAR-2.5.3a index 3f77a14e614e..91216c3d06b6 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.5.3a +++ b/metadata/md5-cache/sci-biology/STAR-2.5.3a @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz -> STAR-2.5.3a.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=1eb821b9192887ab1f2ac6b1536037ac diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 b/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 index 1dd84e6535c8..415a89807421 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 @@ -9,5 +9,5 @@ LICENSE=abyss RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) mpi? ( sys-cluster/openmpi ) SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=14d874a3152b5d75a6be53f68e24fd47 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3 index d61c594371fc..4eba3786bdea 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r3 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 ec7a89849c84f93e9c6db27812923888 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 ec7a89849c84f93e9c6db27812923888 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=6bd792e8b76c06ee993b88f83e48b907 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 index ff8b7a113170..ea75c2cbacd8 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 @@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-l REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=aec6d1c76d5ea621c66e803800e2b3c4 diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 759848fe66c7..7b85fe5b077b 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=80962b244c7531e320f35904727b5bd5 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.1 b/metadata/md5-cache/sci-biology/bamtools-2.5.1 index 2f3b7bfd4fca..39cc9cd45f3f 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.1 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.1 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.1 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.1.tar.gz -> bamtools-2.5.1.tar.gz -_eclasses_=cmake 9f6da23aab151395c55f018fb13a11b2 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 9f6da23aab151395c55f018fb13a11b2 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index b57c583358b6..f7a2c3580007 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -8,5 +8,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake 9f6da23aab151395c55f018fb13a11b2 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 git-r3 3e7ec3d6619213460c85e2aa48398441 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 9f6da23aab151395c55f018fb13a11b2 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 git-r3 3e7ec3d6619213460c85e2aa48398441 l10n 8cdd85e169b835d518bc2fd59f780d8e multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.10.2 b/metadata/md5-cache/sci-biology/bcftools-1.10.2 index 329e8f270929..efcb4b2b7caa 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.10.2 +++ b/metadata/md5-cache/sci-biology/bcftools-1.10.2 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8 python_single_target_python3_9 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=ac6cc22f29007163af34c271cc6e7143 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.29.2 b/metadata/md5-cache/sci-biology/bedtools-2.29.2 index 889ca8f81b46..2b80cff3393f 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.29.2 +++ b/metadata/md5-cache/sci-biology/bedtools-2.29.2 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 python-any-r1 54a3178500786b0a7ede4a23b7f2a6ad python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 python-any-r1 54a3178500786b0a7ede4a23b7f2a6ad python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=52532bdb1b359fc4da02741b3993ddab diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index b2cd2dba0104..faa78b405b86 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=f752137cf374be5cbb2754f3aa98ad0d diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index 999a4a61d65d..70cfa0995362 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index d06fdb45271a..705e6700f36a 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targe RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=166fe4793b11cfa03f951b2afe4f902a diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index f25ae867de63..55ee0e592838 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=be22a76392a6e5c121e4b6d388045faa diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index 7d888888867f..c695efea1cbb 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2470d7ecf1b6ff1902a8d74057748480 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index ea6ecfb4fc3f..0637036e69b0 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8f7c4053ffbec76cfad29cca2d99847b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index 5591e5339a14..d6ed85e0b5ee 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9caec4e5b47cbf306a1689903f2a018a diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77 index 4a88809827ba..af8aac01758d 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.77 +++ b/metadata/md5-cache/sci-biology/biopython-1.77 @@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz -_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c eutils fcb2aa98e1948b835b5ae66ca52868c5 multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb -_md5_=2502844c6cd3803b4b7a13edfe3f2fb9 +_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 optfeature 6c9aa35fc16df43d7142ef2660e00e25 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_md5_=6cc3c97eed10a69e2025091cace865ed diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2 index b9754d128c2f..ee61c525ef4f 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r2 +++ b/metadata/md5-cache/sci-biology/blat-34-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=cfc86b588e33e0935a06563d2a9c19c0 diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 deleted file mode 100644 index 46057664431e..000000000000 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 +++ /dev/null @@ -1,13 +0,0 @@ -DEFINED_PHASES=compile install prepare -DEPEND=tbb? ( dev-cpp/tbb ) sci-biology/seqan:1.4 app-arch/unzip -DESCRIPTION=Popular short read aligner for Next-generation sequencing data -EAPI=6 -HOMEPAGE=http://bowtie-bio.sourceforge.net/ -IUSE=examples +tbb -KEYWORDS=~amd64 ~x86 ~x64-macos -LICENSE=Artistic -RDEPEND=tbb? ( dev-cpp/tbb ) -SLOT=1 -SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf -_md5_=069dc133bc01cabadeda1e327034b7a7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9 index 9c4daecb8ce4..2d4d5bc43311 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.9 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=46d87c867cd445707dc1913cf3dd7eb6 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.16a b/metadata/md5-cache/sci-biology/bwa-0.7.16a index 1e02583c0716..37a9ad4d0c4d 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.16a +++ b/metadata/md5-cache/sci-biology/bwa-0.7.16a @@ -7,5 +7,5 @@ LICENSE=GPL-3 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.16a.tar.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=6b21049857f301168f361c45510f8256 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 index e0674ca7a3ef..c46c33ea9883 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bbe0ae10275a73485487e08f19f4ac1b diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index 82f2a56de37d..cd90f410b33b 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=9ade45d2e283bc5fcc7eef16725e18ae diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 4926c7fd81e2..f3c4c96b2278 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-sol LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=0f69889feff7a8cb3002ae5d4ea053d3 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 index e9f232ee1d88..1a2b33695ede 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=9e376a1d2ae782d9495b0c6c318aa097 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index 9162311c11d7..a9b5f5d86303 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 estack 686eaab303305a908fd57b2fd7617800 multilib 2477ebe553d3e4d2c606191fe6c33602 qmake-utils 4eb5e05ef7ee630c003e3f0edc094135 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 estack 686eaab303305a908fd57b2fd7617800 multilib 98584e405e2b0264d37e8f728327fed1 qmake-utils 4eb5e05ef7ee630c003e3f0edc094135 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=3f60f1952758458fc3cd4e2789a942f5 diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index ede43a23d0af..f1fd755775da 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=1e30f1827727dab34c75c8c026745369 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index 47202f77bab8..2d5ce76ef3b1 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=b04d9beffea802bb82f896df101ca660 diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index f773283c744b..cd7fc11d700b 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=3761a69a47f38308f54ae0b051361ed6 diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4 index 62a7b72c5637..df367b064437 100644 --- a/metadata/md5-cache/sci-biology/diya-1.0_rc4 +++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal? ( sci-biology/mummer sci-biology/glimmer sci-biology/trnascan-se sci-biology/infernal ) dev-lang/perl:=[-build(-)] SLOT=0 SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=5d4639d7c08c43e2c2208492508fd56c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 index f46875b1541a..6524f1b23c2e 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=dbee2f511488caf9eadadb20d043a2da diff --git a/metadata/md5-cache/sci-biology/embassy-6.6.0-r1 b/metadata/md5-cache/sci-biology/embassy-6.6.0-r2 index b4d67ce54ddb..da79487711b8 100644 --- a/metadata/md5-cache/sci-biology/embassy-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/embassy-6.6.0-r2 @@ -4,6 +4,6 @@ EAPI=6 HOMEPAGE=http://emboss.sourceforge.net/embassy/ KEYWORDS=~amd64 ~x86 ~x86-linux LICENSE=metapackage -RDEPEND=>=sci-biology/embassy-cbstools-1.0.0.660 >=sci-biology/embassy-clustalomega-1.1.0.660 >=sci-biology/embassy-domainatrix-0.1.660 >=sci-biology/embassy-domalign-0.1.660 >=sci-biology/embassy-domsearch-0.1.660 >=sci-biology/embassy-emnu-1.05.660 >=sci-biology/embassy-esim4-1.0.0.660 >=sci-biology/embassy-hmmer-2.3.2.660 >=sci-biology/embassy-iprscan-4.3.1.660 >=sci-biology/embassy-meme-4.7.660 >=sci-biology/embassy-mse-3.0.0.660 >=sci-biology/embassy-phylipnew-3.69.660 >=sci-biology/embassy-signature-0.1.660 >=sci-biology/embassy-structure-0.1.660 >=sci-biology/embassy-topo-2.0.660 >=sci-biology/embassy-vienna-1.7.2.660 +RDEPEND=>=sci-biology/embassy-cbstools-1.0.0.660 >=sci-biology/embassy-clustalomega-1.1.0.660 >=sci-biology/embassy-domainatrix-0.1.660 >=sci-biology/embassy-domalign-0.1.660 >=sci-biology/embassy-domsearch-0.1.660 >=sci-biology/embassy-emnu-1.05.660 >=sci-biology/embassy-esim4-1.0.0.660 >=sci-biology/embassy-hmmer-2.3.2.660 >=sci-biology/embassy-iprscan-4.3.1.660 >=sci-biology/embassy-mse-3.0.0.660 >=sci-biology/embassy-phylipnew-3.69.660 >=sci-biology/embassy-signature-0.1.660 >=sci-biology/embassy-structure-0.1.660 >=sci-biology/embassy-topo-2.0.660 >=sci-biology/embassy-vienna-1.7.2.660 SLOT=0 -_md5_=0b1857c92d1042b678e6eab58eda3420 +_md5_=f0bb78193b5ac077edf12dbcf43e4eb2 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index 8c827fc1b85c..910d502d6840 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=4166ba28131fdf70907b31300aa4c08b diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index aa5b4d317f1b..aac53cd80c3e 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ef491b452e56be12961f62b16961f4f1 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index 4c198cb6c955..f1735bde0b46 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index 84a2e09a640f..83de3c323f66 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9f8b2caa273f4ae3b0463e6de6782660 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index 007aab3e378c..6b40593d9a4a 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=920906439fbc5278460201b23a615736 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index af2f2e80a4d0..5491aeff7e84 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=d82c7c44ec76fa5d6165769a73e5df9a diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index 2b6665fc96b2..d2c6e4cd5291 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=1b156bed7ea031aeb5464836dd987f18 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index 4289e0ef384e..60458ac92fa8 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=83d02ae22d4e1864669639d9289cd112 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index 7b05433907aa..c81a6aff29a2 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=73b0c29964ea3506d18ef6b6c8df70e1 diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 index 66373b547a12..3a9b464950ac 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=b18db6d7a2159272c7b69d34a14dc9b5 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index bbef744d0dbc..d908744160bb 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=84df94b7c4b0f044de45cef524cbf453 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index dc7685a83dcd..1d531d916493 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=052915aa60b919df12c7c4274d5be551 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index 2ad7cbfb3de8..cfebfe759da3 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=4cb685046b5a39b624eb3467b815c2c4 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index 383ab25b09e9..2d1e4e5beada 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=634d624be78f958ed7fca02e7dc43bd4 diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index 7575aea75b2a..e6862978e641 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=e50220ee11093554b589c1f9f53e7c09 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index 0ca9fb00cdf7..7bf6c474766c 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=d257de40bcdb33c0735daac8a5f15fda diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index 7a4497e5f573..9cb4eb2bdc80 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -10,5 +10,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 22ae82e140bdd95d17a34fd5fd733190 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 8895be811ae4511c202bcf2ddb7dbfd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 22ae82e140bdd95d17a34fd5fd733190 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=99a47266a2a8f2fd0a874111491146e2 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 48a2de48125a..d85f6d0a3365 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=683d1e7f9daeda6cd20b92117330ea81 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index 2d6d5e77a1d0..5d43f0121e8b 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=05c99b447503c7a3fae4594cd126939a diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 3d1688491352..bd0e16e53b4e 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=10c478f1e1a9a533322963cf4c2e92f8 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index b4f2a55e4070..5acf8c210ae7 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=81d08e889f0cf03161c6bf834effe531 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index b8fa6b45c298..58bb5c24616b 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=5a3e768febbbadcd5c8a4141dd49e11c diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 index fca6845fa804..dcef1759f7a9 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 @@ -8,5 +8,5 @@ LICENSE=AGPL-3 RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=c3bb0edd6b01a31019cf5fd59e22122a diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 index b879c772abc2..448bdc575623 100644 --- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 +++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=finchtv SLOT=0 SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=08355830f28d1052c2ab527b82a8dd68 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3 b/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3 index 313f4c1f646d..c90503c563fb 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.5.1-r3 @@ -9,5 +9,5 @@ RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0* RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.5/fahclient_7.5.1-64bit-release.tar.bz2 -_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 2477ebe553d3e4d2c606191fe6c33602 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 98584e405e2b0264d37e8f728327fed1 systemd 69be00334d73f9f50261554b94be0879 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 versionator 2352c3fc97241f6a02042773c8287748 _md5_=8ca37225f92ffd3cc94ad6b4a4f43b0c diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13 index f14fe01bfacd..2bb2d8ffb9db 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0* RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 systemd 71fd8d2065d102753fb9e4d20eaf3e9f toolchain-funcs 605c126bed8d87e4378d5ff1645330cb user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 systemd 69be00334d73f9f50261554b94be0879 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb user 7b7fc6ec5eb1c1eee55b0609f01e7362 user-info a2abd4e2f4c3b9b06d64bf1329359a02 _md5_=35efc85acab21d56c5bb97f30da7e0f8 diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4 index 9480bab4769f..603e85726187 100644 --- a/metadata/md5-cache/sci-biology/gatk-2.4 +++ b/metadata/md5-cache/sci-biology/gatk-2.4 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 ec7a89849c84f93e9c6db27812923888 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 ec7a89849c84f93e9c6db27812923888 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd versionator 2352c3fc97241f6a02042773c8287748 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8afea474ed6c1f4ad5ac6d6a18c49542 diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index 3d707c085c9a..ca1b90a57bab 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=8d48efee68d1063803fccbc4c73a0f5d diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 index 6233f649eae6..081c2d43b09c 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 +++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 @@ -7,5 +7,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=94600a4de5a2dc02bc6652d958a2a034 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 3d8f87279090..b86bc024099e 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -7,5 +7,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=6916d92c69198563f19b744f1e57dddc diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index 3502e3c45c56..b52955783041 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=9fc33629a982f35b93c18da772894fdd diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index 80c28bd7251f..bd6e9790b098 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index b43dc9f10d3a..6a43d0ab144a 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=a3b1f788e8f5b38e41b3a9e38f91fe88 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2 index 46cc8df4e421..5cf82ff3669f 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r2 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=175d26382226c7bed2b44be485b01d01 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1 index dda26c139bb6..49ac043a12d8 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.43.1 +++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1 @@ -8,5 +8,5 @@ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999 index 4c063c544357..23623d6cb185 100644 --- a/metadata/md5-cache/sci-biology/kallisto-9999 +++ b/metadata/md5-cache/sci-biology/kallisto-9999 @@ -7,5 +7,5 @@ LICENSE=BSD PROPERTIES=live RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 git-r3 3e7ec3d6619213460c85e2aa48398441 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 git-r3 3e7ec3d6619213460c85e2aa48398441 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3 index 29fb78ab9416..3ea597b76b2d 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r3 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3 @@ -7,5 +7,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=c9dbddd6a22f2e20ff25d0aa1e6f4280 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 index eee3f897681e..e77a49bcc3c0 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=867c9b9e4eee26ad2a76ff6ff0594f52 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index 1c79d57485fd..5e409125d1ca 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=75ed445f47bb6f3b4dd4a52cb903183f diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index 9889fb0f0691..99213cfa6fc7 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index b4c641c38573..d0a2e43c52e6 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 3bfd048cf515..4e59101e3b2f 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index b3c33d24d333..b8300a106567 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -10,5 +10,5 @@ RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-l REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 estack 686eaab303305a908fd57b2fd7617800 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 estack 686eaab303305a908fd57b2fd7617800 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb versionator 2352c3fc97241f6a02042773c8287748 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index 1e178e16a858..288fb2d7b0d9 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=e7b4c654f7c0055be7ef6347b5bdfb8a diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 7018cf0e3dbd..ef0ea5206874 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=630686b35f8a549c580c5fd0e2cb02fc diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 011cd67e541a..4e72f5821cea 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 fortran-2 b4796813ccda91c9c0d3463fc90aa969 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 fortran-2 b4796813ccda91c9c0d3463fc90aa969 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=17f8b3c73710bbb746fc4cbfcf78b85d diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index fdf97f50ec14..3e0ea4c8aabb 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=a944448f568e57bb9f221cd1f437ab09 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23 index ab3bb77859d0..28118d138726 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23 +++ b/metadata/md5-cache/sci-biology/mummer-3.23 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c256f298b416306c1be7005e7877f7b9 diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 89a50e5440c2..5851abe7e01c 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=500ff424aff8c56744362bc87a3ff285 diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 index 6ddcc1cf5acf..d51081fbe4ef 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt ) SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8bcc533f96e3c3fe8bf6e5b090a4dacd diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2 index d5723343eb4e..bc4356e6ba31 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3-r2 +++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=c70b49c7f5e1a92f5169df372f9638c6 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1 index f46d3ce6e531..39149e4eea64 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=b0df20d47905df6a290c5fe2f79fd48b diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1 index 9830964c13e0..d2f6604ce281 100644 --- a/metadata/md5-cache/sci-biology/paml-4.4c-r1 +++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz -_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=estack 686eaab303305a908fd57b2fd7617800 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb versionator 2352c3fc97241f6a02042773c8287748 _md5_=c46d709378282d4ccbb567aaa00ee01a diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index 22b86648db2e..3e319274eacd 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=8f5aa73e6a49ffbd5804d4ddea05b2b8 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1 index 43ea81f56e45..4de5cc1e79e3 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r1 +++ b/metadata/md5-cache/sci-biology/phred-071220-r1 @@ -7,5 +7,5 @@ LICENSE=phrap RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=6cb07f602eee34da61fd893818f30936 diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1 index 5aa90af3294f..e0527161957c 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.69-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1 @@ -8,5 +8,5 @@ LICENSE=free-noncomm RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=b42cd8579055d407d2b75b6dccdf2c7a diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1 index 20f92e551f61..9775ba6ad842 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.696-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1 @@ -8,5 +8,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=0e36eb92b11c05e1704acd5ce863d792 diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r2 b/metadata/md5-cache/sci-biology/phylip-3.696-r2 index 42d412dad5e2..503d09539f49 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.696-r2 +++ b/metadata/md5-cache/sci-biology/phylip-3.696-r2 @@ -8,5 +8,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !!dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=33ab1d7ce3016bdb569e9fd1a4fd5d90 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 index 9d64a9461c09..09c15ea1c563 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 @@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7 diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index e594a1815a89..85e88c8a587b 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 ec7a89849c84f93e9c6db27812923888 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e java-ant-2 8d9cb415f1ca9fc7ebc5a74bacec300c java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 ec7a89849c84f93e9c6db27812923888 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=09627e6bb74ee9997324bde01a56bcbd diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1 index f9fc8aaaa973..d4e2628f0af5 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r1 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=7b5a6d618aac08240cf165a04509c319 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 index 84c7420e6cae..fa33f62cd0e3 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=d9f7901d3776c424cfb93782cc6ddafa diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 5b48bdcee181..57f0d85c60b0 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=570249dc23feeff7b47b3e81df358196 diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 91bb06718743..2f9c6dbf2be0 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=d7bb9c94a05320cd21ff72a8beb56406 diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index e70262ecaa61..03557a83c138 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=17023476000980284365a9c0ed04a6f0 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index 1f3f7e95ff7e..97ec7d2dedc7 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=e79ee4774138e651c83467c2b2cb2926 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index a2c33d9197d6..2b66e9174836 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=19a24bd3c543d599d5b3392e66b7022e diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3 index ff4c479f7a74..f00f72991e46 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=9cea3bcc55e864076d7e4b542f657f96 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39 index fe3b107c7225..7467be1a5b70 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.39 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.39 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8e866cc812e134cdc7a7837e5b60aa21 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40 index 748fceae938f..7b844c417c1f 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.40 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.40 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=b641a6cfd444fa4b83d5963246948636 diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4 index 969b639a5abb..de9f7be089e8 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.4 +++ b/metadata/md5-cache/sci-biology/psipred-3.4 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=44623bcd0b50824824056739420b4873 diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index 98691249131b..ec9119299b88 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 prefix c2993e4c430c1ee24f278983d6189501 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=44623bcd0b50824824056739420b4873 diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1 index 56ebe520b19d..eb419fa5f947 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz -_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=distutils-r1 eb92d1a6d9057e2422cc9610f79f919c multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=c0f872ce3ed106718898376443d0cfe6 diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index cfdd2e485ed2..bcfc73e3193e 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 9b6cc0c69669..1d0c0e75575d 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=f2b8e0b4e5701d9b20bcbf9151c9b868 diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08 index cd3aa677b94d..c18c9c178a76 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08 +++ b/metadata/md5-cache/sci-biology/recon-1.08 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=2ddd537d912c7c88b6f0b0d203a51613 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index 4fab7f47375c..84417e19cc40 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -8,5 +8,5 @@ LICENSE=OSL-2.1 RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz https://dev.gentoo.org/~mgorny/dist/rmblast-1.2-gcc47.patch.bz2 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=1283e94bf3a231a794a498d2769aaa7d diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 index ee0f8338d834..6404379bfda6 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=788c156d45287bef4f6aa876055bde4c diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 index a881d60eb19e..44e0e43d0ed0 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=sys-libs/ncurses:0= dev-lang/perl SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=6fc0899be7ff3370d9a4ac561b8f39a8 diff --git a/metadata/md5-cache/sci-biology/samtools-1.10 b/metadata/md5-cache/sci-biology/samtools-1.10 index 8455d6004cf3..2fb071d50618 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.10 +++ b/metadata/md5-cache/sci-biology/samtools-1.10 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.10* sys-libs/ncurses:0=[unicode] sys-libs/zlib:= SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.10.tar.bz2 -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=67d56fa48d3a475403ad1a726690e370 diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5 index a56eb07ee776..bef00e62e2eb 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.3.5 +++ b/metadata/md5-cache/sci-biology/seaview-4.3.5 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4 index ed3617d352c2..40ee9d0794a3 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.5.4 +++ b/metadata/md5-cache/sci-biology/seaview-4.5.4 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6 index 98362a937777..1d6129786e67 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6 +++ b/metadata/md5-cache/sci-biology/seaview-4.6 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw:2 || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=1a6723f1ab0e67cc0d63dd54a902900f diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 deleted file mode 100644 index de515cb8ba36..000000000000 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ /dev/null @@ -1,15 +0,0 @@ -DEFINED_PHASES=compile configure install postinst prepare setup test -DEPEND=app-arch/bzip2 sys-libs/zlib test? ( || ( ( >=dev-lang/python-2.7.5-r2:2.7 dev-python/nose[python_targets_python2_7(-),python_single_target_python2_7(+)] ) ) || ( >=dev-lang/python-2.7.5-r2:2.7 ) ) sys-devel/make >=dev-util/cmake-3.9.6 -DESCRIPTION=C++ Sequence Analysis Library -EAPI=6 -HOMEPAGE=http://www.seqan.de/ -IUSE=cpu_flags_x86_sse4_1 test -KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux -LICENSE=BSD GPL-3 -RDEPEND=app-arch/bzip2 sys-libs/zlib -REQUIRED_USE=cpu_flags_x86_sse4_1 -RESTRICT=!test? ( test ) -SLOT=1.4 -SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 54a3178500786b0a7ede4a23b7f2a6ad python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba -_md5_=1f1cf11ee07a7961e6fa23345e516b65 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 deleted file mode 100644 index dce7e9a2293e..000000000000 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ /dev/null @@ -1,15 +0,0 @@ -DEFINED_PHASES=compile configure install prepare setup test -DEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 doc? ( || ( ( >=dev-lang/python-2.7.5-r2:2.7 dev-python/sphinx[python_targets_python2_7(-),python_single_target_python2_7(+)] ) ) || ( >=dev-lang/python-2.7.5-r2:2.7 ) ) test? ( || ( ( >=dev-lang/python-2.7.5-r2:2.7 dev-python/nose[python_targets_python2_7(-),python_single_target_python2_7(+)] ) ) || ( >=dev-lang/python-2.7.5-r2:2.7 ) ) sys-devel/make >=dev-util/cmake-3.9.6 -DESCRIPTION=C++ Sequence Analysis Library -EAPI=6 -HOMEPAGE=http://www.seqan.de/ -IUSE=cpu_flags_x86_sse4_1 doc test -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=BSD GPL-3 -RDEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 -REQUIRED_USE=cpu_flags_x86_sse4_1 -RESTRICT=!test? ( test ) -SLOT=0 -SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 54a3178500786b0a7ede4a23b7f2a6ad python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 xdg-utils ff2ff954e6b17929574eee4efc5152ba -_md5_=16bcf021b05ae673eb5878cdcefd8d8c diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0 index c7d3c5ee3e9f..505e06cfdf37 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0 @@ -1,14 +1,14 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 doc? ( || ( ( >=dev-lang/python-2.7.5-r2:2.7 dev-python/sphinx[python_targets_python2_7(-),python_single_target_python2_7(+)] ) ) || ( >=dev-lang/python-2.7.5-r2:2.7 ) ) dev-util/ninja >=dev-util/cmake-3.9.6 +DEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 dev-util/ninja >=dev-util/cmake-3.9.6 DESCRIPTION=C++ Sequence Analysis Library EAPI=6 HOMEPAGE=http://www.seqan.de/ -IUSE=cpu_flags_x86_sse4_1 doc tools +IUSE=cpu_flags_x86_sse4_1 tools KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=BSD GPL-3 RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 54a3178500786b0a7ede4a23b7f2a6ad python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba -_md5_=ca34cde2b2fc2f8692469a016bc077f6 +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_md5_=f4fd93f51141b17b6915c7b5b28cc1b4 diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999 index 3dd409e4634f..6199bb08d405 100644 --- a/metadata/md5-cache/sci-biology/seqan-9999 +++ b/metadata/md5-cache/sci-biology/seqan-9999 @@ -1,13 +1,13 @@ DEFINED_PHASES=compile configure install prepare setup test unpack -DEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 doc? ( || ( ( >=dev-lang/python-2.7.5-r2:2.7 dev-python/sphinx[python_targets_python2_7(-),python_single_target_python2_7(+)] ) ) || ( >=dev-lang/python-2.7.5-r2:2.7 ) ) dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl] +DEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl] DESCRIPTION=C++ Sequence Analysis Library EAPI=6 HOMEPAGE=http://www.seqan.de/ -IUSE=cpu_flags_x86_sse4_1 doc tools +IUSE=cpu_flags_x86_sse4_1 tools LICENSE=BSD GPL-3 PROPERTIES=live RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 git-r3 3e7ec3d6619213460c85e2aa48398441 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 54a3178500786b0a7ede4a23b7f2a6ad python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba -_md5_=954c2a9b05e60f6a61eb27c1cc720117 +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 git-r3 3e7ec3d6619213460c85e2aa48398441 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_md5_=894809b96951695cbe345aa3e8298ed2 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index 3e2dfb4cd22f..36d35332bcbe 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_single_target_python2_7? ( >=dev-lang/p REQUIRED_USE=^^ ( python_single_target_python2_7 ) SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 d3100de905f978df912135806cf27188 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=98a7a2b9765ad5e245b1b7b9be67060b diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index d0ec911095f9..4603f69f33ce 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=84a29c8972011ec4b86f3c8235a7b5d2 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index 08a4ba16aa27..3e2239239fcf 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index 203a96958af2..4fbf108dd2e1 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -7,5 +7,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=897f9fd1d73b5a7779f29a7ca161cb75 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 index ae9799033648..4e877f4b521b 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=5c54b109c5b8bef93adbc5f99ddd7114 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index 9adbe952ac98..f4afb283b052 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=8bd164fc83c9bb1d9a2e9559a47ff526 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 912d5dc61ca3..d915ed9a5149 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets e1e6e1eb5b3d911b3abd712f611e2312 +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets e1e6e1eb5b3d911b3abd712f611e2312 _md5_=ce129f3e61a849cfd3654e5a9fa4b17a diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 8af881d6500c..5836ee92c084 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=3f4bcdf31fe276f90a95e2f4b311deae diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 456fb5071ab5..1113b7efbff3 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake-utils 77cd39e6009811bf97a59d91ffd5b54f desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils 132cbb376048d079b5a012f5467c4e7f preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=6adcbb8c658bdc3c40f797c61f5c58b0 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index fefa4a89bb6f..2f8ebcc7f268 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 16783e418aca3ffa461d68310bf7ab12 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ecc35fd7ec196a9e5cce4c0c51af618f diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 9c50776448be..3068537659a6 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=f6e357557efc2f86eab0adadd32142ce diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index c347a4a8a796..e461a848a06f 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=82adffd84f2a93745e683b498b79fbe8 diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index b45590de0c07..4160a1004775 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic 09a8beb8e6a8e02dc1e1bd83ac353741 l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=420632435bf1efe77241192fff993a20 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index c17bd3c69426..6fcab5f20949 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 eb92d1a6d9057e2422cc9610f79f919c epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 2729691420b6deeda2a90b1f1183fb55 multibuild b2c915190b051f55a23b9354b9849847 multilib 2477ebe553d3e4d2c606191fe6c33602 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 autotools-utils 95db0904ad0f62535e18e5ccb67cce5e desktop 7fd20552ce4cc97e8acb132a499a7dd8 distutils-r1 eb92d1a6d9057e2422cc9610f79f919c edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune db8b7ce9d0e663594bcb4a4e72131a79 multibuild b2c915190b051f55a23b9354b9849847 multilib 98584e405e2b0264d37e8f728327fed1 multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 97206c028d9bdc9f248e022ac5c9fc83 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 8d03325e7e3cf3e1465d9c32031e2517 python-utils-r1 bae936266b68e0c374a74f2b0d0aaa44 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb unpacker 8ee8c1a2f31437d1766aac890d07a7f4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=b2a6486af275e75c6365ab7eeba1e0bd diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 index 202f9f785ee1..6666b4fda947 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=net-libs/libtirpc x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 -_eclasses_=multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=8de6fdef210cdf37e56e086c61983865 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index cfe1ceba1e89..48d9cd1950d2 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -9,5 +9,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils fcb2aa98e1948b835b5ae66ca52868c5 ltprune 2729691420b6deeda2a90b1f1183fb55 multilib 2477ebe553d3e4d2c606191fe6c33602 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 +_eclasses_=desktop 7fd20552ce4cc97e8acb132a499a7dd8 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch ed88001f77c6dd0d5f09e45c1a5b480e estack 686eaab303305a908fd57b2fd7617800 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune db8b7ce9d0e663594bcb4a4e72131a79 multilib 98584e405e2b0264d37e8f728327fed1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=5089373e8fa38f080134e22ddf59264c diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index 8a84c1a24ef0..8a59cc26dba0 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 2477ebe553d3e4d2c606191fe6c33602 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb +_eclasses_=autotools 7d999b62b8749fad43fff00620cedf47 libtool f143db5a74ccd9ca28c1234deffede96 multilib 98584e405e2b0264d37e8f728327fed1 toolchain-funcs 605c126bed8d87e4378d5ff1645330cb _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |