diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
114 files changed, 127 insertions, 112 deletions
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index c5a981bd88ab..8f8747fa10c8 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15 SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=088b19055886b41078acab0f96df204a diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 index 0d19fe96f280..664a5cc2a2cb 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 @@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(- REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz -_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index 89f4d25c03b9..2b24e305a684 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -10,5 +10,5 @@ PROPERTIES=live RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 -_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex b73982b072ab..a3a27ef0b145 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/STAR-2.5.3a b/metadata/md5-cache/sci-biology/STAR-2.5.3a index 9c3b9652d0dc..aa7a498f01ea 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.5.3a +++ b/metadata/md5-cache/sci-biology/STAR-2.5.3a @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz -> STAR-2.5.3a.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=1eb821b9192887ab1f2ac6b1536037ac diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 b/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 index f99f082d968c..18c57023e2bf 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 @@ -9,5 +9,5 @@ LICENSE=abyss RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) mpi? ( sys-cluster/openmpi ) SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=14d874a3152b5d75a6be53f68e24fd47 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r4 b/metadata/md5-cache/sci-biology/amap-2.2-r4 index 22df8af64c11..9b6b6ee9f129 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r4 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 e83ca06db890ca292b0b6d43e376e20d java-pkg-opt-2 bf35c60a54945228d5d4cb3a5cc17f5a java-utils-2 32fe52795e36e76dcbcf92d89bb1c4d0 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 e83ca06db890ca292b0b6d43e376e20d java-pkg-opt-2 bf35c60a54945228d5d4cb3a5cc17f5a java-utils-2 32fe52795e36e76dcbcf92d89bb1c4d0 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=857434504156a8892f1335babe24f9f0 diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 6c46bebf0e3b..73c286d8a2cc 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=80962b244c7531e320f35904727b5bd5 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index 29e0e97940fc..2059adaf6be3 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 97ff6f2a476e..0a755309580f 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -8,5 +8,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.13 b/metadata/md5-cache/sci-biology/bcftools-1.13 index 33c0ae63728e..b0048f48d238 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.13 +++ b/metadata/md5-cache/sci-biology/bcftools-1.13 @@ -11,5 +11,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.13/bcftools-1.13.tar.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 d46c125afba8be02eb1cd7104bac6e9c python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 d46c125afba8be02eb1cd7104bac6e9c python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a7d6aa14a25dfbfd5fa4547dea06070c diff --git a/metadata/md5-cache/sci-biology/bedtools-2.29.2 b/metadata/md5-cache/sci-biology/bedtools-2.29.2 index 4bd6d454a863..a3f4087b63d1 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.29.2 +++ b/metadata/md5-cache/sci-biology/bedtools-2.29.2 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz -_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 13f6d423c5c5bc519a9b552654cc745f python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 13f6d423c5c5bc519a9b552654cc745f python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=f3eef2425b0d021201cd5bb705836375 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 9aad2331eeda..385a0cf0e195 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 13f6d423c5c5bc519a9b552654cc745f python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 13f6d423c5c5bc519a9b552654cc745f python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=14bf1e3697276975f4e8b47a297b1bf5 diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 5322b16a9d75..8bf5dcad7aaa 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index 0193c51e942e..7feee6ad6cb5 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index a3d5c25ca23c..1a95184df219 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=6e4b8600d4f3c3ac26b099a9c4577ca0 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index b3462cfbf91f..194c328885e0 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8a48cf5c6cd3d568ec12cc4fdb88021b diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index ee953df05c08..7bb138668ad8 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8f7c4053ffbec76cfad29cca2d99847b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index b1a8e2874926..57ebce028f1b 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 unpacker 928e1f35ef78ba9fc2b214e29c2b55a4 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=990b4cff1e1e1338ee686efddaad7810 diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77 index 245bc6ea1a48..b0ec1136f211 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.77 +++ b/metadata/md5-cache/sci-biology/biopython-1.77 @@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz -_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=7f5250b5ff62ae5ff155616d0b65204b diff --git a/metadata/md5-cache/sci-biology/biopython-1.79 b/metadata/md5-cache/sci-biology/biopython-1.79 new file mode 100644 index 000000000000..be873bc52f72 --- /dev/null +++ b/metadata/md5-cache/sci-biology/biopython-1.79 @@ -0,0 +1,15 @@ +BDEPEND=sys-devel/flex python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) python_targets_python3_10? ( dev-lang/python:3.10 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] +DEFINED_PHASES=compile configure install postinst prepare test +DEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/networkx[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/rdflib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pygraphviz[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pydot[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] +DESCRIPTION=Python modules for computational molecular biology +EAPI=8 +HOMEPAGE=https://www.biopython.org/ https://pypi.org/project/biopython/ +IUSE=python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 +KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux +LICENSE=HPND +RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/networkx[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/rdflib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pygraphviz[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pydot[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) python_targets_python3_10? ( dev-lang/python:3.10 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] +REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) +SLOT=0 +SRC_URI=mirror://pypi/b/biopython/biopython-1.79.tar.gz +_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_md5_=4e2a43ec127b152970bd1c43306e9418 diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2 index 2b9a845888e9..8408e9dda90b 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r2 +++ b/metadata/md5-cache/sci-biology/blat-34-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=cfc86b588e33e0935a06563d2a9c19c0 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4 index 34e4184d98d7..647e252708ac 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.4.4 +++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4 @@ -11,5 +11,5 @@ RDEPEND=python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python- REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 d46c125afba8be02eb1cd7104bac6e9c python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 d46c125afba8be02eb1cd7104bac6e9c python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a169406c93e64d9cae6cbb8ad262f62b diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index 4fde7cee1370..236fbc946512 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=620c3569e8293303737f7844385c7e82 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 index c484ff740861..9df21d3e3039 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bbe0ae10275a73485487e08f19f4ac1b diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index 2174397b7528..f401929a695e 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ade45d2e283bc5fcc7eef16725e18ae diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index ab2a3b52a5dd..08640f517499 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -6,5 +6,5 @@ KEYWORDS=amd64 ~ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-so LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=0bc3b2f2f4e07f1d81ee076b0fbe6c60 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 index 5384753c88b0..488561d593e1 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=689841db0e3b7d6629b51049a2942165 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index 0d61e2080d08..4f11cf3c6797 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 4b66d835ec72e021e359bb81eacfe988 qmake-utils f5eb2f69fffe94292aaaf802fb21c8d1 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 4b66d835ec72e021e359bb81eacfe988 qmake-utils f5eb2f69fffe94292aaaf802fb21c8d1 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=3f60f1952758458fc3cd4e2789a942f5 diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index 6aa6e30bbd53..e4d7a227d772 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=1e30f1827727dab34c75c8c026745369 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index e6fe312f80c3..9408ebfc9b4c 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=b2a78c4cfa60eb348ae63d076ecb5fba diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index fa4c23479cf5..93b6ce60d23d 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=3761a69a47f38308f54ae0b051361ed6 diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 index 906b441207dd..b8559fe9da3f 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=dbee2f511488caf9eadadb20d043a2da diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index 5667d53bbf15..727e91a6c092 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=77305643fe2a87a5fac7d915688baa6a diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index 5cc5ff551475..b0533c48305a 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=58b5684a48770c482660c463cca0df76 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index abbbcaa42d58..e40f55eba895 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=20f6c7abf908473570516ff49847a320 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index 3858a03df5e1..2da1fc42e6c9 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=fc6983ff5591fa7825d4cd99d376c861 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index 88de997c9a8d..7c33a1ddb492 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=00bdcd88d6e9743af4531e223888195b diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index da01b2b0ffb2..68de39eeead1 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=54738204e5b5aeb9aa0216f7c53c77df diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index 45b1d18f1e8e..601a8ba1b5c9 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=63d13362b3c8b045b78ed452697b59f3 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index d61dc68900f4..41a802162d73 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c5399e3d4e7e59aaa70e6477a41a7345 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index d440567740b9..5b8f7481dbe5 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=88c3ac6be6849f4230f25bf463931561 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index 61dec82a4523..7236c9031562 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c9843cceb68b918a80ed15c2043942d3 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index a3e34732561d..0f827372a3e3 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ecb2590e9a1ae2353dafa387e89d48c diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index 7356149a78ee..dd8d802cfc56 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=0be4d65f424916bbe6d7f507fed3014f diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index 77593cfce16d..6dae00f65f46 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=a0f67c8d9181b193f43eb5e99fdbe92f diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index fe54749e7e0e..4bd9b3dd555e 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ecbee609930ce8d1c14b72746c0ff64 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index ac4e06ea735b..1eb1b65ca40c 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=a8689fa9b1b33a787474fc8f11e65998 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index 488ed1297ab4..dcda98262008 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -11,5 +11,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches.tar.xz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 readme.gentoo-r1 c9646d622541c023f5159b86a14e930c strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 6149b9a50119f07968449cfd6874508a eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 readme.gentoo-r1 c9646d622541c023f5159b86a14e930c strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ca77e598a1b176f454ece551aad686da diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index dbf0818583ea..ba49348116e7 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=683d1e7f9daeda6cd20b92117330ea81 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index b65f88125322..ee80ae2b8388 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=05c99b447503c7a3fae4594cd126939a diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index b29d36cefc19..97995f78f104 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=b4fcbc714ea460615318f4baa4bc347a diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index 9ae86181ade7..a581985b57c1 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=43c2cf221a4fd397bebdbe11749a1707 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index d8dd3bfc0f07..9063bc82c6bc 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 index ce277460570e..1a6eb553d352 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 @@ -8,5 +8,5 @@ LICENSE=AGPL-3 RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c3bb0edd6b01a31019cf5fd59e22122a diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 index 13c089f430d2..5cb1b85045ee 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13-r1 @@ -10,5 +10,5 @@ RDEPEND=acct-group/foldingathome acct-group/video acct-user/foldingathome app-ar RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 systemd 2736b403a83f194b59b767f3b344c2c1 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 systemd 2736b403a83f194b59b767f3b344c2c1 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=f2ef46b617dbd53a6e9dbdd86ff70bf1 diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index e2a9642c914d..05af3c529fa5 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=8d48efee68d1063803fccbc4c73a0f5d diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 67187b293915..034980a0d8f8 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -7,5 +7,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=f30d3e570cfa5c3e8efb2a7c44bc15e7 diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index c4d54f50e949..34691e90c970 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9fc33629a982f35b93c18da772894fdd diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index 14cb010d30e7..5d79f6678283 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index 81beec8aa273..96299c79cb81 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a3b1f788e8f5b38e41b3a9e38f91fe88 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2 index 18ccb9e0c727..e96c374aed1d 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r2 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=175d26382226c7bed2b44be485b01d01 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index 1b07ae51648f..83e5d1eb44d0 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -11,5 +11,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r4 b/metadata/md5-cache/sci-biology/lagan-2.0-r4 index 380391c07c48..f1af9174efe8 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r4 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r4 @@ -7,5 +7,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=c4b4e347541c85d423cac28e03a104d4 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 index f0e823ef3324..266e67f4f7c5 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=867c9b9e4eee26ad2a76ff6ff0594f52 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index 6e25050b7b88..259bda9ace3d 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=0f3bc4071e292477254a6b10ab15b328 diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index 1faa7661680e..29a5bc154bc9 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index decddd687015..8e6c36037300 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 4adfca923569..02f4ddf4b12a 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index e639663fbbab..409c033f66cf 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=73304a1404ed3e3b66ccd621d32cd6db diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 5f1ee6b215d5..467a22eebdfc 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 fortran-2 7e39eb204d37699d5f1eaf9f4d61888a multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 fortran-2 7e39eb204d37699d5f1eaf9f4d61888a multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2a931ea6d0536a0cb3441d235f5d2d6b diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 22d32245c41a..d6ab08152be1 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=934b64005f56b5809a9cbbdf69aab63b diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23 index 06edb66ae0e3..db182dee4153 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23 +++ b/metadata/md5-cache/sci-biology/mummer-3.23 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c256f298b416306c1be7005e7877f7b9 diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 3314975d5ad3..d0695b97a091 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=70730a85bf27816f07c7b7498e5adc91 diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index 1c437a9ec7fe..bb4c3c0dd1c9 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -10,5 +10,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1 index aa46ea0ca0c5..d54642b8d0c2 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=b0df20d47905df6a290c5fe2f79fd48b diff --git a/metadata/md5-cache/sci-biology/paml-4.9j b/metadata/md5-cache/sci-biology/paml-4.9j index a6ea88716593..8e454855fbf6 100644 --- a/metadata/md5-cache/sci-biology/paml-4.9j +++ b/metadata/md5-cache/sci-biology/paml-4.9j @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.9j.tgz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=236ce838eff8e04f8059e18110b3ff38 diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index 9bbd71b76645..b920b65f1582 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=8f5aa73e6a49ffbd5804d4ddea05b2b8 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1 index adc225a45098..e3d21b67aea0 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r1 +++ b/metadata/md5-cache/sci-biology/phred-071220-r1 @@ -7,5 +7,5 @@ LICENSE=phrap RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=6cb07f602eee34da61fd893818f30936 diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index f681c80d1f68..60603c0bd04c 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -9,5 +9,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 index 4ab42bc393ab..06b65096d018 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 @@ -6,5 +6,5 @@ KEYWORDS=amd64 ~ppc x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=8909f510fa1072825fa60fbc8a72920e diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index fa010f793347..4745e33675ac 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 e83ca06db890ca292b0b6d43e376e20d java-pkg-2 2d0eb1353bf1264bd6e61736d3e409a2 java-utils-2 32fe52795e36e76dcbcf92d89bb1c4d0 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 e83ca06db890ca292b0b6d43e376e20d java-pkg-2 2d0eb1353bf1264bd6e61736d3e409a2 java-utils-2 32fe52795e36e76dcbcf92d89bb1c4d0 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=09627e6bb74ee9997324bde01a56bcbd diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1 index 3e8872f4cd92..6b1faa634be9 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r1 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=7b5a6d618aac08240cf165a04509c319 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 index a06f5bd2cc96..8da3fec9cbe1 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=d9f7901d3776c424cfb93782cc6ddafa diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index e6c7eb03679f..7d25eec5fad1 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=e839f5daef081dde4b2d3e0417010738 diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 3a48990adc97..29e0e04db945 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=d7bb9c94a05320cd21ff72a8beb56406 diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index fa956fe6a427..54418fece625 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=17023476000980284365a9c0ed04a6f0 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index d7d6db1a21d2..f96934faeb1a 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=e79ee4774138e651c83467c2b2cb2926 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 96790cd01c75..d8a4feb26726 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=0f60285a7f7c2929aed4404425c3fc40 diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3 index 98239cc32ce0..2b9bf059ae6d 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9cea3bcc55e864076d7e4b542f657f96 diff --git a/metadata/md5-cache/sci-biology/pysam-0.17.0 b/metadata/md5-cache/sci-biology/pysam-0.17.0 index e2026d69b604..42b5af0b2d60 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.17.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.17.0 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.17.0.tar.gz -> pysam-0.17.0.tar.gz -_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=distutils-r1 8041037f74e1f9d149c038c2fe2c97cf multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e574a3642f886323f18f867ecc4d91c4 python-utils-r1 a8b7938ade305f087865de7e52d079b5 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=5afaf93aeaee2506b60aa22aac9b3a2c diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index 8ec8def295a2..ffd72ffb320a 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 29eb5e8fa42a..d73f9e302ea2 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08 index f783d92bf0ac..740e803ce6de 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08 +++ b/metadata/md5-cache/sci-biology/recon-1.08 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=2ddd537d912c7c88b6f0b0d203a51613 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index 96cd2fbc0b6c..c7778268ff5d 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -8,5 +8,5 @@ LICENSE=OSL-2.1 RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz https://dev.gentoo.org/~mgorny/dist/rmblast-1.2-gcc47.patch.bz2 -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2f7831c50cdca352d9a7b340a8bee159 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 index fc9248b249ee..ff4d60d98855 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=788c156d45287bef4f6aa876055bde4c diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 index 641630282c14..a4290d9e252d 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=sys-libs/ncurses:0= dev-lang/perl SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=89941c8b8d527ccc386063a3f533ef77 diff --git a/metadata/md5-cache/sci-biology/samtools-1.13 b/metadata/md5-cache/sci-biology/samtools-1.13 index 755c5d1cbb03..9786c5650de0 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.13 +++ b/metadata/md5-cache/sci-biology/samtools-1.13 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.13*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.13.tar.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=1319bb15b069d25fce506452f0b3a88f diff --git a/metadata/md5-cache/sci-biology/seaview-4.6-r1 b/metadata/md5-cache/sci-biology/seaview-4.6-r1 index 1dc7a60291e3..3696ea5107bf 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6-r1 +++ b/metadata/md5-cache/sci-biology/seaview-4.6-r1 @@ -10,5 +10,5 @@ LICENSE=public-domain RDEPEND=sci-biology/clustalw:2 sci-biology/phyml || ( sci-libs/libmuscle sci-biology/muscle ) sys-libs/zlib x11-libs/fltk:1[xft?] x11-libs/libX11 xft? ( x11-libs/libXft ) SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a742711d8523a4e49524662c12d647c2 diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 index f1a02a94edaa..2d2218a5d8d5 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seq REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=8796fa7c1594d16d8a9b96920de5cf2b diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 14aea0793059..c7121b0a9c10 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=da65f25e1cebcf8c22efbffb6b2b5c95 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index ef5e2c4d0bca..d9f967c4d1fa 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index a854eb87a218..f2b2a67a2a8f 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -7,5 +7,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9ec341e7ee97fc8fd15fa6e200e17bfd diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 index 72178e677a70..a112071e215b 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=5c54b109c5b8bef93adbc5f99ddd7114 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index 43602f79a40e..a33cb93b4c88 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=8bd164fc83c9bb1d9a2e9559a47ff526 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 54c9312932d1..d5764fb7d754 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 7e8a20d3bacea0e3ecf6e96fb72180aa +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 7e8a20d3bacea0e3ecf6e96fb72180aa _md5_=14493f936bb599dd7faec748cece70f3 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 308e42b35236..d61a40a788f8 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 perl-functions fea344a91ebf37efadf172c6a3de5a72 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 perl-functions fea344a91ebf37efadf172c6a3de5a72 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=3f4bcdf31fe276f90a95e2f4b311deae diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index e58bcefd005e..8d3f6cb229b0 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 11fee991ab428a3370e5c20fa8231fb6 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 _md5_=421c75fd545cd9d38575321e00aeab36 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index f2251e3c64e2..6b4f774a1a33 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 1f86d48539f8..3a8c81145bae 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -9,5 +9,5 @@ LICENSE=unafold RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=140380fdaf468f37ce9bb27d0026ec8e diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 81719f035148..0f9cd42cabf7 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 perl-functions fea344a91ebf37efadf172c6a3de5a72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic d5e1306543bc457213f68bb18f830d14 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 perl-functions fea344a91ebf37efadf172c6a3de5a72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=82adffd84f2a93745e683b498b79fbe8 diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 6967481984d5..717a75ee213c 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=flag-o-matic d5e1306543bc457213f68bb18f830d14 multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=f48eb0348a1ac91d41dde22d3ced2ea1 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 index f509b801b368..146b6637d89f 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha-r1 @@ -10,5 +10,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa +_eclasses_=multilib 4b66d835ec72e021e359bb81eacfe988 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=34f9a1f8b8f239e402200b9b5cb4f3cc diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index 068ea0686ed8..0c0528f672bf 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools c9df06c186913b43eb211100ef5fe2cf desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 4b66d835ec72e021e359bb81eacfe988 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |