diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r-- | metadata/md5-cache/sci-biology/GBrowse-2.48-r1 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/Manifest.gz | bin | 33111 -> 33124 bytes | |||
-rw-r--r-- | metadata/md5-cache/sci-biology/bamtools-2.5.1 | 6 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/bamtools-9999 | 6 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/express-0.9.5-r1 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/express-1.5.1 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/fasttree-2.1.7 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/fasttree-2.1.8 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/kallisto-0.43.1 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/kallisto-9999 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/seqan-1.4.2-r1 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/seqan-2.2.0-r1 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/seqan-2.4.0 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/seqan-9999 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/uchime-4.2.40 | 2 | ||||
-rw-r--r-- | metadata/md5-cache/sci-biology/ucsc-genome-browser-260 | 2 |
16 files changed, 19 insertions, 19 deletions
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index ae950b5feded..b5fbc5bada06 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15 SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 6ae2395d7f341093c36057cb4f69101a _md5_=bccaeef3292f6df307fc14fb5a2a74b2 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex ff66752aced9..3acd31d41fac 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.1 b/metadata/md5-cache/sci-biology/bamtools-2.5.1 index fb7cd053ee47..3f7602f05548 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.1 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= virtual/pkgconfig sys-devel/make >=dev-util/cmake-3.9.6 +DEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6 DESCRIPTION=A programmer's API and an end-user's toolkit for handling BAM files EAPI=6 HOMEPAGE=https://github.com/pezmaster31/bamtools @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.1 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.1.tar.gz -> bamtools-2.5.1.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 -_md5_=2f7d6b2856395f0920d7b682b6bbad56 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_md5_=283ed3269c843bce2ee0a9cefad79fe0 diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 5205c4143daf..1da7d439b7d0 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test unpack -DEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= virtual/pkgconfig sys-devel/make >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1 +DEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1 DESCRIPTION=A programmer's API and an end-user's toolkit for handling BAM files EAPI=6 HOMEPAGE=https://github.com/pezmaster31/bamtools @@ -7,5 +7,5 @@ IUSE=static-libs LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 -_md5_=2f7d6b2856395f0920d7b682b6bbad56 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_md5_=283ed3269c843bce2ee0a9cefad79fe0 diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index 6d4e5060cfc0..89b039986839 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=6d15a446bfc7659cceaabe3567001583 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 6d77aada5a37..381c0d1e47cf 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=a2d4ea80b964801c45f62ae737430d6d diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index 0b38330fda02..0ce9bb5ad2a9 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=20d72299931c8f8e092006a9b668182c diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index ffcda8d68db4..8bdf39139a61 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=f2b648d93a4c0ca58285574958cde15a diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1 index d2bbb00223d0..dff8302fa305 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.43.1 +++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1 @@ -8,5 +8,5 @@ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999 index c2cd5505dbcb..9a8dba3f49cd 100644 --- a/metadata/md5-cache/sci-biology/kallisto-9999 +++ b/metadata/md5-cache/sci-biology/kallisto-9999 @@ -6,5 +6,5 @@ HOMEPAGE=http://pachterlab.github.io/kallisto/ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index c22e8ce6fe6c..14e91e7d9c13 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=1b7be060ecec73f1e66596a71b90a92a diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 index 2342d0ba90ad..d70041a8ee57 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 26ca8a8bd95d6a74122c08ba98a4ee72 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=aaf78a04252c5e6c2b92b04c7211b73c diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0 b/metadata/md5-cache/sci-biology/seqan-2.4.0 index e31a780a9ef2..5e535c856350 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/s REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=ca34cde2b2fc2f8692469a016bc077f6 diff --git a/metadata/md5-cache/sci-biology/seqan-9999 b/metadata/md5-cache/sci-biology/seqan-9999 index 30941314eed7..4804b1db9d2a 100644 --- a/metadata/md5-cache/sci-biology/seqan-9999 +++ b/metadata/md5-cache/sci-biology/seqan-9999 @@ -8,5 +8,5 @@ LICENSE=BSD GPL-3 RDEPEND=app-arch/bzip2:= sys-libs/zlib:= !!sci-biology/seqan:2.0 !!sci-biology/seqan:2.1 !!sci-biology/seqan:2.2 REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 git-r3 af51ccfceeb403ab80f1bf9209d372c8 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 python-any-r1 6faea633ae2f79f6d55dcfd431b79fbf python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=954c2a9b05e60f6a61eb27c1cc720117 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 66cf23eab5df..b44fe4a61d37 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake-utils 49cd471f02483798c5068698836b7429 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=cmake-utils 57384a259cf0c7985ce651b2c0865405 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 eapi7-ver d97a56a62c7df8614afddcb25f5ff00f epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 ninja-utils d2e7e7d290428bb25c56dcf2502badc1 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=6adcbb8c658bdc3c40f797c61f5c58b0 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 index b3a9e45ec1b3..5bc028ed6726 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 @@ -10,5 +10,5 @@ RDEPEND=app-arch/unzip !<sci-biology/ucsc-genome-browser-223 mysql? ( virtual/my REQUIRED_USE=server? 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