diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
132 files changed, 131 insertions, 131 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index e86c2abbb5b1..f03905e9e4f2 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/tcl:0 dev-lang/tk:0 RESTRICT=mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bf78ab8abbdb34e4f7d5c8a0b4429c0f diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index ee83ee8a9df0..0bf1b55ec9f6 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15 SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 webapp a76ebd3cb5649737496e8238992dd7ca _md5_=bccaeef3292f6df307fc14fb5a2a74b2 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index 596281d297d4..fe21f0bff16b 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -8,5 +8,5 @@ LICENSE=GPL-3+ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 ) SLOT=0 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 git-r3 52a888802d25387c2c74cb845d1219bc multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 git-r3 fec09a83ae965b041b47f5ff7c8ba29a multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=baebb3e5c138076f90cdaad5bc41573f diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex c184f817a4a9..c5063ed7384e 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 index 2d5072455e07..e2045c76b171 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 +++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=!sci-biology/allpaths !sci-biology/vaal SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=89ad1ab9497c178e43302814589f5f26 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3 index 4c0634652876..d05d5e5f7301 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r3 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6bd792e8b76c06ee993b88f83e48b907 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r3 b/metadata/md5-cache/sci-biology/amos-3.1.0-r3 index d0044b53c278..627b858df161 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r3 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r3 @@ -10,5 +10,5 @@ RDEPEND=qt4? ( dev-qt/qtcore:4 ) python_targets_python2_7? ( >=dev-lang/python-2 REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=df778f6981c64e06ab2354697c3fc4a6 diff --git a/metadata/md5-cache/sci-biology/arb-5.1-r1 b/metadata/md5-cache/sci-biology/arb-5.1-r1 index c44c07cca1d6..0a0a326ebd22 100644 --- a/metadata/md5-cache/sci-biology/arb-5.1-r1 +++ b/metadata/md5-cache/sci-biology/arb-5.1-r1 @@ -9,5 +9,5 @@ LICENSE=arb RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11-libs/libXaw x11-libs/libXpm x11-libs/motif:0 opengl? ( media-libs/glew media-libs/freeglut || ( media-libs/mesa[motif] ( media-libs/mesa x11-libs/libGLw ) ) ) sci-visualization/gnuplot SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.1/arbsrc.tgz -> arb-5.1.tgz mirror://gentoo/arb-5.1-glibc2.10.patch.bz2 https://dev.gentoo.org/~jlec/arb-5.1-linker.patch.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=55cafcf3d37a81cfa2273ca02c35bb00 diff --git a/metadata/md5-cache/sci-biology/arb-5.2 b/metadata/md5-cache/sci-biology/arb-5.2 index 8a2d215e3afb..2758369f37d6 100644 --- a/metadata/md5-cache/sci-biology/arb-5.2 +++ b/metadata/md5-cache/sci-biology/arb-5.2 @@ -9,5 +9,5 @@ LICENSE=arb RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11-libs/libXaw x11-libs/libXpm x11-libs/motif:0 opengl? ( media-libs/glew media-libs/freeglut || ( media-libs/mesa[motif] ( media-libs/mesa x11-libs/libGLw ) ) ) sci-visualization/gnuplot SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.2/arbsrc.tgz -> arb-5.2.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.2-linker.patch.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=f0ab0e2c5ca080655274968b7915db12 diff --git a/metadata/md5-cache/sci-biology/arb-5.3 b/metadata/md5-cache/sci-biology/arb-5.3 index 718eca60b523..bda9022ac66f 100644 --- a/metadata/md5-cache/sci-biology/arb-5.3 +++ b/metadata/md5-cache/sci-biology/arb-5.3 @@ -9,5 +9,5 @@ LICENSE=arb RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11-libs/libXaw x11-libs/libXpm x11-libs/motif:0 opengl? ( media-libs/glew media-libs/freeglut || ( media-libs/mesa[motif] ( media-libs/mesa x11-libs/libGLw ) ) ) sci-visualization/gnuplot SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.3/arbsrc.tgz -> arb-5.3.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.3-linker.patch.xz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bf2908058bcd4bfbaa7c0eb481d7c999 diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 556b1ae883b5..f31bb89e26f0 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=5660f556708e8c3b5d43c9ef832e66ec diff --git a/metadata/md5-cache/sci-biology/bamtools-2.4.2 b/metadata/md5-cache/sci-biology/bamtools-2.4.2 index 77e15c5d268d..a6cca3e4f589 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.4.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.4.2 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.4.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.4.2.tar.gz -> bamtools-2.4.2.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=3909e5231807b2e0a56168032dda99a5 diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 388e34d8548e..85a4e9c1d252 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -6,5 +6,5 @@ HOMEPAGE=https://github.com/pezmaster31/bamtools LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 git-r3 52a888802d25387c2c74cb845d1219bc ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 git-r3 fec09a83ae965b041b47f5ff7c8ba29a ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=3909e5231807b2e0a56168032dda99a5 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 index 8ac98d5e6f87..46a9b90ae2c0 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-java/junit:4 dev-java/jebl:0 dev-java/matrix-toolkits-java dev-java/commons-math:2 dev-java/jdom-jaxen:1.0 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/beast-mcmc-1.7.5.tar.xz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=ff6d5ad394902a1137f7b3a310e2da17 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-9999 b/metadata/md5-cache/sci-biology/beast-mcmc-9999 index b26937a98b42..503193d98fcf 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-9999 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-9999 @@ -7,5 +7,5 @@ IUSE=elibc_FreeBSD elibc_FreeBSD LICENSE=LGPL-3 RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-java/junit:4 dev-java/jebl:0 dev-java/matrix-toolkits-java dev-java/commons-math:2 dev-java/jdom-jaxen:1.0 >=dev-java/java-config-2.2.0-r3 SLOT=0 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e subversion a5d5826a85609611f098c0553eb24cc1 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e subversion a5d5826a85609611f098c0553eb24cc1 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=8ad11964919894b7a04467aea903b1c3 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0 index 480ef90dcf6c..067dc8b41041 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.26.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=76f5a1f39ff7b393994b8a22dc4a192f diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index d81d5f501e99..449bdd330aff 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-perl/XML-Simple SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=abc362f15c5107d96bedfb879ea0375f diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 index c9eb07ef6313..8cc99db1dfaa 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4 @@ -10,5 +10,5 @@ RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(- REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=4bf8773b4c6c512c3e616bf999994904 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index f4cfa897bcca..f1a48c3bc149 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=be22a76392a6e5c121e4b6d388045faa diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1 index 4b3525b25e64..bdbf59a8fef8 100644 --- a/metadata/md5-cache/sci-biology/bioperl-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2 PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-db-9999 ) network? ( >=sci-biology/bioperl-network-9999 ) run? ( >=sci-biology/bioperl-run-9999 ) RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)] SLOT=0 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=210415961127105f0fc625670ba9e423 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index a9290a159eb9..fe354e7bc1b9 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=2470d7ecf1b6ff1902a8d74057748480 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 index f5e6e8de7993..532f83039e97 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 @@ -6,5 +6,5 @@ HOMEPAGE=http://www.bioperl.org/ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)] SLOT=0 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=fd4229be06b3975302e9e37ca35601d2 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index 00553d57b165..4f1272eed1b6 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)] SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=cb366a6a0c6cf3c12320c2d6d3551abe diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 index ba26bf2d5401..fe5a9bc9355d 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 @@ -7,5 +7,5 @@ IUSE=test LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)] SLOT=0 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=025cd5fa89be402f3296160dbf755c8b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index 1c8895b23bda..ffa5bd57aa4a 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=9caec4e5b47cbf306a1689903f2a018a diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 index 076f25d9f091..ce85ed0d22df 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/XML-Twig dev-perl/IO-String dev-perl/IPC-Run ) dev-lang/perl:=[-build(-)] RESTRICT=test SLOT=0 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=26abe4f8477c1a1c22bd8515484ce1c1 diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68 index 53a57ff3bbec..b28f134cd424 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.68 +++ b/metadata/md5-cache/sci-biology/biopython-1.68 @@ -10,5 +10,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 ) SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=4a82fa47ce713f463d26f604da0ee94a diff --git a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 index 715ad7eb5578..3a576daf96db 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 @@ -10,5 +10,5 @@ RDEPEND=ruby_targets_ruby22? ( dev-ruby/libxml[ruby_targets_ruby22] ) ruby_targe REQUIRED_USE=|| ( ruby_targets_ruby22 ) SLOT=0 SRC_URI=http://bioruby.org/archive/bioruby-1.4.3.0001.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng 1a95cd8be181598c8171cf918aa225d9 ruby-utils f8a0644cb27ba724df27b2a20a739b53 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng 1a95cd8be181598c8171cf918aa225d9 ruby-utils f8a0644cb27ba724df27b2a20a739b53 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=0bff0c3e2db3a9967274e417280ca082 diff --git a/metadata/md5-cache/sci-biology/bioruby-1.5.1 b/metadata/md5-cache/sci-biology/bioruby-1.5.1 index b1eb4a132913..0af4772950b8 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.5.1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.5.1 @@ -10,5 +10,5 @@ RDEPEND=ruby_targets_ruby22? ( dev-ruby/libxml[ruby_targets_ruby22] ) ruby_targe REQUIRED_USE=|| ( ruby_targets_ruby22 ruby_targets_ruby23 ) SLOT=0 SRC_URI=mirror://rubygems/bio-1.5.1.gem -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng 1a95cd8be181598c8171cf918aa225d9 ruby-utils f8a0644cb27ba724df27b2a20a739b53 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem cf1343b57e8029745950b4b147ff4d3a ruby-ng 1a95cd8be181598c8171cf918aa225d9 ruby-utils f8a0644cb27ba724df27b2a20a739b53 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=279e084b7a2a210af63381996d8b6488 diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2 b/metadata/md5-cache/sci-biology/bowtie-1.1.2 index d652aea16e3e..4605d4c62a96 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~x64-macos LICENSE=Artistic SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d123eea345ef4aa6c2c174df53575eeb diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 index 612f2a99df29..b2dbc2a582d1 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=tbb? ( dev-cpp/tbb ) SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=069dc133bc01cabadeda1e327034b7a7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.6 b/metadata/md5-cache/sci-biology/bowtie-2.2.6 index edee1f172dc2..7d24aa8908b2 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.6 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.6 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=dev-lang/perl SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.6/bowtie2-2.2.6-source.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9a4ea0d94d151da708192284a1117dd7 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 index 8dbc07175206..8f81bed2d179 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bbe0ae10275a73485487e08f19f4ac1b diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 index 610631393cca..9ce39021c17f 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz -_eclasses_=base 983774947da124fb7d542ce25a218bb1 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c qt4-r2 b7985a3197fbc3a22d059f19904e735b toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=base 983774947da124fb7d542ce25a218bb1 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c qt4-r2 b7985a3197fbc3a22d059f19904e735b toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8348b4854d048ec19d5706f2d0461a2c diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r2 b/metadata/md5-cache/sci-biology/clustalx-2.1-r2 index 7cd8633bd4c0..5f9271270072 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r2 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=660b3463bc17c65cb8772961e042a81c diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index 6144368130fa..2d9fa74de350 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d533d3bc63ad3989cce879478db9de97 diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index 0caebdc919d2..7243707b0fde 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.62.0:= python_targets REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=183887a425454e50269f2be3e9af5b7e diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 index af17f98104c5..88b57765b200 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=aadd3cbbb875bbc0d53d08117691ad8e diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4 index e84d5a357059..065e43ec5742 100644 --- a/metadata/md5-cache/sci-biology/diya-1.0_rc4 +++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal? ( sci-biology/mummer sci-biology/glimmer sci-biology/trnascan-se sci-biology/infernal ) dev-lang/perl:=[-build(-)] SLOT=0 SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=5d4639d7c08c43e2c2208492508fd56c diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index 6a9426c70b14..42b44e18d890 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4166ba28131fdf70907b31300aa4c08b diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index af847b04e4cb..6a7a8e87d21d 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=ef491b452e56be12961f62b16961f4f1 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index 1b18968b6099..8924ca2b4d04 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index beadb2d9dbb2..5b32b4f386c2 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9f8b2caa273f4ae3b0463e6de6782660 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index 5fd35bc2f60d..fcea0bc7e72a 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=920906439fbc5278460201b23a615736 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index a8b6b167a906..c5f43263a8e9 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d82c7c44ec76fa5d6165769a73e5df9a diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index a68908bc2d8e..1c648e9291e5 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1b156bed7ea031aeb5464836dd987f18 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index de88752f3fc2..b5c1db68fb5d 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=83d02ae22d4e1864669639d9289cd112 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index 98f1756044d6..2405cdee86e7 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=73b0c29964ea3506d18ef6b6c8df70e1 diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 index e5cf8a797969..cc6b6eea708b 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b18db6d7a2159272c7b69d34a14dc9b5 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index 6a51503cf255..b36b2321e9e9 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=84df94b7c4b0f044de45cef524cbf453 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index dc618e64aa4d..213793760624 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 freedist RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=00620d36fbf4790dc2ecfb240ba9816c diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index 5708b99e5b3d..3adef37678fe 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4cb685046b5a39b624eb3467b815c2c4 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index aa6c7c900bfd..b85c44157136 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=634d624be78f958ed7fca02e7dc43bd4 diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index 47734a4ec707..9dabc91e74ad 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e50220ee11093554b589c1f9f53e7c09 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index 84599e5ee23d..d5e5bfe226a6 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d257de40bcdb33c0735daac8a5f15fda diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index 6b6fc73a55dc..4d20c2726745 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -10,5 +10,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=99a47266a2a8f2fd0a874111491146e2 diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index 539bc4e0c16d..c5cf35b73916 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6d15a446bfc7659cceaabe3567001583 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 123fbb488116..15160015fdf7 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=a2d4ea80b964801c45f62ae737430d6d diff --git a/metadata/md5-cache/sci-biology/fasta-35.4.10 b/metadata/md5-cache/sci-biology/fasta-35.4.10 index c719ffd1ed07..3c844394463f 100644 --- a/metadata/md5-cache/sci-biology/fasta-35.4.10 +++ b/metadata/md5-cache/sci-biology/fasta-35.4.10 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~ppc x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta3/fasta-35.4.10.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bc70246741c824a5b11b9e292d26c372 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index 2b082f6b6a3a..479d6e8ad9c9 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7b46f81d2659e9120c49874e774b5ca0 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index a3395db2c6b5..0de004431187 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=20d72299931c8f8e092006a9b668182c diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index 45fdf0c31e5b..070d4a0ca179 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=f2b648d93a4c0ca58285574958cde15a diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 index a9310a08b956..7c0a07dc955a 100644 --- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 +++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=finchtv SLOT=0 SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=08355830f28d1052c2ab527b82a8dd68 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r2 b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r2 index 644de934f3ed..519aa2ccffdc 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r2 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r2 @@ -9,5 +9,5 @@ RDEPEND=app-arch/bzip2 sys-devel/gcc sys-libs/glibc sys-libs/zlib RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.4/fahclient_7.4.4-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.4/fahclient_7.4.4-64bit-release.tar.bz2 ) -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e systemd 34815d3b76e745c5ca33eec9f95074c2 toolchain-funcs 185a06792159ca143528e7010368e8af user 8bc2845510e2109af75e3eeac607ec81 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e systemd 34815d3b76e745c5ca33eec9f95074c2 toolchain-funcs 185a06792159ca143528e7010368e8af user 8bc2845510e2109af75e3eeac607ec81 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=86f961609a642ab48b8d01340679c697 diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4 index cb0429446e59..e70a4148989a 100644 --- a/metadata/md5-cache/sci-biology/gatk-2.4 +++ b/metadata/md5-cache/sci-biology/gatk-2.4 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af vcs-snapshot 03289f51c769cf409d200d2d628cdd6e versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af vcs-snapshot 03289f51c769cf409d200d2d628cdd6e versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=8afea474ed6c1f4ad5ac6d6a18c49542 diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999 index a977d44c92a3..f92cd225c2d0 100644 --- a/metadata/md5-cache/sci-biology/gatk-9999 +++ b/metadata/md5-cache/sci-biology/gatk-9999 @@ -7,5 +7,5 @@ IUSE=elibc_FreeBSD elibc_FreeBSD LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 git-2 195a672bfaf52d868442171c9469bbb6 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 git-2 195a672bfaf52d868442171c9469bbb6 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=df4fa840e567320d0f100f0073200f23 diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index c05a5c2579e6..989d57c3f3a8 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e28918ff8ca46c8b8254e4e36f8d0bcf diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 index d74704924190..162c25ec134c 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 +++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 @@ -7,5 +7,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=fda3f095f34da47d12e170b3c40dfd67 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 8ecbaec294b2..f33297f41f45 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -7,5 +7,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=http://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1a77df881e0fba38094c344e97b529a5 diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index a09eb9691b99..86ec9d786a1e 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=addae30e588a0c7a05baea53d553af0f diff --git a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 index 9ea6427bde5b..46e89029026f 100644 --- a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 +++ b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=gmap SLOT=0 SRC_URI=http://research-pub.gene.com/gmap/src/gmap-gsnap-2015-12-31.v5.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=398e7f0670f5bd07e45f2780d7fe03cf diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 index 0e4cb317c39c..cfb1772a029f 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.7.3 ) >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d8bbf59f45f0b32b55de88f3c5233883 diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 index 7a94abaa4d02..b4c83ef57569 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.8.1 ) >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d8bbf59f45f0b32b55de88f3c5233883 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 index 1fa642f352dc..bde045df5408 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=416e64f4b9f8268c7d795c45e35bacf7 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.43.1 b/metadata/md5-cache/sci-biology/kallisto-0.43.1 index 03a423cc2bb8..2c7f4e97f9d3 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.43.1 +++ b/metadata/md5-cache/sci-biology/kallisto-0.43.1 @@ -8,5 +8,5 @@ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.43.1.tar.gz -> kallisto-0.43.1.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/kallisto-9999 b/metadata/md5-cache/sci-biology/kallisto-9999 index 5b4b18aad2ba..9a6c4b75fb47 100644 --- a/metadata/md5-cache/sci-biology/kallisto-9999 +++ b/metadata/md5-cache/sci-biology/kallisto-9999 @@ -6,5 +6,5 @@ HOMEPAGE=http://pachterlab.github.io/kallisto/ LICENSE=BSD RDEPEND=sci-libs/hdf5:= sys-libs/zlib:= SLOT=0 -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 git-r3 52a888802d25387c2c74cb845d1219bc ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 git-r3 fec09a83ae965b041b47f5ff7c8ba29a ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=b5fc562bf49e70db44b86bc5702ae9f2 diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230 index 0603b3edac10..c13d58f98b67 100644 --- a/metadata/md5-cache/sci-biology/last-230 +++ b/metadata/md5-cache/sci-biology/last-230 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/archive/last-230.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=5da658e6779591b0d1b9ad3413a0e7b2 diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050 index 73d318e7b6a8..1153e19874ef 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.050 +++ b/metadata/md5-cache/sci-biology/mafft-7.050 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=10435da51da43a9bd92e9e337fb92445 diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215 index ab542137a750..872ab7953457 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.215 +++ b/metadata/md5-cache/sci-biology/mafft-7.215 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=26a81f4b6b0ff69fbc3eba8869681491 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index a384c29bd7c4..f3109b39bc97 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4701ed0cbf5fff28c6de7c8b01e134af diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312 index 14bdee8e40aa..2f5625421bc2 100644 --- a/metadata/md5-cache/sci-biology/mcl-08.312 +++ b/metadata/md5-cache/sci-biology/mcl-08.312 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135 index 8371ae522c64..a4d697f69564 100644 --- a/metadata/md5-cache/sci-biology/mcl-12.135 +++ b/metadata/md5-cache/sci-biology/mcl-12.135 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index a465d0bd0620..b7f922836afc 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index a3eecbec084f..75a459a00b3d 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4e9fc8a550640febbc0b71544c16618c diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 80037e580ce1..7c7dfec0e07c 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af vcs-snapshot 03289f51c769cf409d200d2d628cdd6e +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af vcs-snapshot 03289f51c769cf409d200d2d628cdd6e _md5_=e8bd620c581af022566733e65d479626 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index a675b81c7a9e..e3ff9fcd2b2c 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=http://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=abcc03749068210ba5c44ba0b4a85e27 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 index fa670c1248d4..86bee26e8717 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a082c9b1f1b5f9fa9b85e23eb7009a6d diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 2bf7583b7964..1db7157f62ad 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a944448f568e57bb9f221cd1f437ab09 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23 index af6c97964038..6634b2bb958a 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23 +++ b/metadata/md5-cache/sci-biology/mummer-3.23 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c256f298b416306c1be7005e7877f7b9 diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 12581639213a..bee62425ea20 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=500ff424aff8c56744362bc87a3ff285 diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 index 9a4e12a3f757..ebe579f69ae8 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt ) SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=770169ddfbcde7c5fbe57bff9b10ca14 diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1 index a05e09bb045e..f0f55b404d99 100644 --- a/metadata/md5-cache/sci-biology/paml-4.4c-r1 +++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=c46d709378282d4ccbb567aaa00ee01a diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index e0cd3d8f4135..a665e732d79a 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -9,5 +9,5 @@ LICENSE=Apache-2.0 RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons-jexl:2 dev-java/ant-core:0 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip ) SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=09627e6bb74ee9997324bde01a56bcbd diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1 index c5ae9fdd9905..dd87e3730b58 100644 --- a/metadata/md5-cache/sci-biology/plink-1.07-r1 +++ b/metadata/md5-cache/sci-biology/plink-1.07-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib lapack? ( virtual/lapack ) SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b659cc5ab8af123ceaf15f1349214345 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 697535fab41c..42f0f66bf3c5 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=570249dc23feeff7b47b3e81df358196 diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 4ec1401d1e30..d90e31ae2245 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -7,5 +7,5 @@ KEYWORDS=~x86 ~amd64 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4f0b8d6c2192465644af4890a995d48a diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.5 b/metadata/md5-cache/sci-biology/primer3-2.3.5 index 9de4d843001f..211c41025a61 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.5 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.5 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ppc ~ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-s LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.5/primer3-2.3.5.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b7f3f26331b5241399cbf40ac9eeeabc diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.6 b/metadata/md5-cache/sci-biology/primer3-2.3.6 index 9b26f6c19de3..fdb7ae8802e1 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.6 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.6 @@ -7,5 +7,5 @@ KEYWORDS=amd64 ppc ~ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-s LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.6/primer3-src-2.3.6.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e95de8dec7345b06ff7fac5c6c009d53 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index 21f001a52b5e..b6562f426d88 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8b3d4a5940e96102e289acad426724d9 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index ebd290cabfbe..5c06713f5c43 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=19a24bd3c543d599d5b3392e66b7022e diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39 index c21de18f4ac4..13d66e7c2bfa 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.39 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.39 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8e866cc812e134cdc7a7837e5b60aa21 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40 index 11eba6beea24..cc045e21db00 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.40 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.40 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b641a6cfd444fa4b83d5963246948636 diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1 index 6ccf97068495..6445adf9c538 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.2.1 @@ -8,5 +8,5 @@ LICENSE=psipred RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=bf7aa50ff789d669fe4846e0e41828d7 diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3 index 266f7b31187e..ae76f76db7a7 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.3 +++ b/metadata/md5-cache/sci-biology/psipred-3.3 @@ -8,5 +8,5 @@ LICENSE=psipred RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d719359ecbbd5c0825e93788cc4f0af1 diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4 index cfdd30b8ef95..7249d0dff83f 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.4 +++ b/metadata/md5-cache/sci-biology/psipred-3.4 @@ -8,5 +8,5 @@ LICENSE=psipred RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=671e20dbd509ebdd9e9c492e2c53b6a1 diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index c68c8738c9c5..2070624476ac 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -8,5 +8,5 @@ LICENSE=psipred RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix 7b6fb2fc216b101b5d97d171925a847c toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=671e20dbd509ebdd9e9c492e2c53b6a1 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 63e4814ef8a8..feaec428df8e 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=f2b8e0b4e5701d9b20bcbf9151c9b868 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index 7eadcf7283f4..7208abb17076 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -8,5 +8,5 @@ LICENSE=OSL-2.1 RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7aa6de8741afab9d848f4cbada44c7ad diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5 index 2cfdef66e81e..98949eabd34d 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.3.5 +++ b/metadata/md5-cache/sci-biology/seaview-4.3.5 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4 index 0c5ff5f5c1e0..ddb40994dcfa 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.5.4 +++ b/metadata/md5-cache/sci-biology/seaview-4.5.4 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6 index e8bdbb226211..98242e09aaf4 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6 +++ b/metadata/md5-cache/sci-biology/seaview-4.6 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11-libs/fltk:1[xft] ) sci-biology/clustalw:2 || ( sci-libs/libmuscle sci-biology/muscle ) sci-biology/phyml SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1a6723f1ab0e67cc0d63dd54a902900f diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index 374c1a9d49cc..d56472634db7 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=b6c214312349c09a0fe901e8d0235a32 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 index 5eb3679fb97e..d9d2f8a87779 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seqan REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=0a4cc55d3cd27897618671fdafc13e2f diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1 index ebd5919634f6..3506e7e18a8d 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.0.1 +++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1 @@ -9,5 +9,5 @@ LICENSE=shrimp RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=33caa30e4cdcb3e86f4b1be8c6c30c46 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index 26f00ac3f41e..03d123e5cc62 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -10,5 +10,5 @@ RDEPEND=!sci-mathematics/cado-nfs python_targets_python2_7? ( >=dev-lang/python- REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=98a7a2b9765ad5e245b1b7b9be67060b diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index 42ed5e1dff06..48bb78da9c8c 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -7,5 +7,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d73db26f06440dc2c2a1e25befe5d490 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 index 6cac4bdd54e5..ebc0c87a0bcf 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_11.00.8cbe486/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a1771c6229fc2548e173d5592657c1b5 diff --git a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 index cf510aaa2c23..ee9ba0eff872 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align virtual/fortran SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_9.03.r1318/T-COFFEE_distribution_Version_9.03.r1318.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=369169186d5a67fbb6f2de9ebbc8fd6e diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 index 7206be51b2a1..1545ba128244 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=efee8069c83c578acac8e57b429ad985 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index aa6b4a768139..7e96d108f074 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=6f933fde60eb23f0e50fbe5e137bbc7e diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 88188d7c2b66..dad2a7bd0225 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af wxwidgets 04e063b0eff26daaea83d859dd9d6e05 +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af wxwidgets 04e063b0eff26daaea83d859dd9d6e05 _md5_=ce129f3e61a849cfd3654e5a9fa4b17a diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 7257798f23bc..958ee1c6c627 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils f9fb12e2dbe2e0c9c17f030bae85eb02 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6adcbb8c658bdc3c40f797c61f5c58b0 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 index 8bdbd79cfd0d..8a4b8780a2bb 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 @@ -10,5 +10,5 @@ RDEPEND=app-arch/unzip !<sci-biology/ucsc-genome-browser-223 mysql? ( virtual/my REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af webapp a76ebd3cb5649737496e8238992dd7ca _md5_=e8bc8c4496d6c751b8f8452324e059f4 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index c5d8576f33c2..cfec22e2f877 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=f6e357557efc2f86eab0adadd32142ce diff --git a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 index 229eebbc6a41..687f8d1179d8 100644 --- a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 +++ b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=dev-lang/perl !sci-biology/ncbi-tools++ SLOT=0 SRC_URI=ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/12_0_0/ncbi_cxx--12_0_0.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=bc882208706b78e231cbfd78c7b5799e diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 9496278e0fbf..7f9d3e2fa911 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c40169dc993f3444a3e2f41ad69a920d diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 index 72bb471e967e..464d850e07c2 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 +++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=89c605a4c416ef8207f85201e0494734 diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 71465b5aba69..a9da16b9f84a 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b46e328f5bece618fd1f41cde92b68c0 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index 2140abd30f6e..47ee0c3d3049 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=1e58c830b49ced05ae9960fcc2dead13 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index e2774ee89910..1e755b0eea65 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz -_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b2a6486af275e75c6365ab7eeba1e0bd diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 index 092ab79ca038..9d2c97f96cb7 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=6ebc94c9eb0083edd0308af8a336afe0 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index af74e8caa815..e4d3aca677e9 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -9,5 +9,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 227b041a120d309fdefbebb3b8c1dfa9 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=3fc50009d15dddcf126bbf0735404920 |