diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
40 files changed, 39 insertions, 39 deletions
diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 index 641d99666fc0..27177abcc5e1 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 +++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz -_eclasses_=distutils-r1 2d32e797ee29a8ffdd452f4a85860666 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 ba15b8b81f30ca448294d759a9f7902c toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=distutils-r1 2d32e797ee29a8ffdd452f4a85860666 flag-o-matic ad475baa777c9978fa035216c8264a10 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 ba15b8b81f30ca448294d759a9f7902c toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index 957675dd7e98..17e32a67309e 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_10(-)?,python_targets_python3_11 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 2d32e797ee29a8ffdd452f4a85860666 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 git-r3 27e13c09a4c7e4c78ac812f74727e676 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 ba15b8b81f30ca448294d759a9f7902c toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=distutils-r1 2d32e797ee29a8ffdd452f4a85860666 flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 27e13c09a4c7e4c78ac812f74727e676 multibuild bddcb51b74f4a76724ff7cf8e7388869 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 3c6cd0f418ba702c186a9865b85e704d python-utils-r1 ba15b8b81f30ca448294d759a9f7902c toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=29d76005d4f5d0a05fc0182fba12f7f5 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex d145f0320260..738e7f52efb9 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index 47a69ffdf12f..f0a8951d66ed 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index ee0ad418c160..806efe46f9c6 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -9,5 +9,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 git-r3 27e13c09a4c7e4c78ac812f74727e676 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 git-r3 27e13c09a4c7e4c78ac812f74727e676 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index 16fdc0e99802..295a2dda184e 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index 1661ee375dba..37d305d4dc4e 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index 3bc59a0c88c8..60991e9cb356 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index a0e1b23fbe0a..8bd520366da4 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index b70ce023ebad..24bd4e453901 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index 372a83da8697..5ee923785922 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index 1f905f26c9e8..2be1cba43406 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=95026ca22c2bacedf52a70b4428e7753 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index 7a8f484d1f7a..bb4b870d37b9 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index be5a1538bb0c..0519a77b32d3 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index 4ad2916a4415..ebf560233df8 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=b6d66fbfe89f6c64f635551357dc90f4 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index 9d63c3fd700f..1e08908bd221 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=93c762366f9cfe8fbfdffd0fdc0483d5 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index 47ace25070b7..1c03d8705250 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index 9073f0c12b40..7d67e6abade5 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index c734009ba05a..9f1cf3aaefec 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index c42e5266702f..28358d625556 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 index 767676cba279..6a14d58f3059 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 @@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=9856dbbe227d34ba8fd5a46c30dc912f diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 21bbc995c229..9233fa0ad086 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -10,5 +10,5 @@ LICENSE=Artistic RDEPEND=dev-libs/boost:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=eb3d3db6cbf83564b8ecca377c50dd20 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index c2f5e15b7e1c..bd0386f1a5f6 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -10,5 +10,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=741f3be1a17b816aabab39443236f37b diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index f93eb60bf972..671120fc07ff 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -10,5 +10,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 index 4bfa808ff093..a965ffb9541a 100644 --- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 +++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RESTRICT=!test? ( test ) SLOT=2 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=766670f9df1a2a937b1b58cf4c63931d diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index 47d61f928ce4..6651dcd0a272 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490 index 2fcb6c5f2405..a3af9a4e8034 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.490 +++ b/metadata/md5-cache/sci-biology/mafft-7.490 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=04971be2bc4044a9c136d12a7e51b23d diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 1b67c3afacc4..6c3531c8149d 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c vcs-snapshot eab6d8533446763c2e9777d8bbd1594e wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c vcs-snapshot eab6d8533446763c2e9777d8bbd1594e _md5_=b275a0e18dbe85d2a2e24cebc796c134 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 54e0e4f1f198..4e6153153632 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=4d1c6c16f8757994256f73d5be45cb8f diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1 index 9a27ad66cc3e..5b0e3baec6d7 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=7103f6fc8a8d965ba2e5b71b09010e1d diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index 6427272364bf..5713848aa492 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -10,5 +10,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 5bddfd5e43fe..cbd5b5924a80 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index b231a8d87dd6..b2238f69f71e 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=327a33751512d78b13d5acd641ba3385 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 index 195024de4166..4f596a45e94f 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=4f19327a55b73328939540ced2179d21 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index a8670b47b188..027659cca411 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wrapper 4a1902f969e5718126434fc35f3a0d9c wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 _md5_=c7a6fb1f3ee6436d674328487c021a24 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 index 69c295086470..351aefbf75db 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl:= SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 index e83682dcc373..1cca22243799 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 +_eclasses_=cmake 7fb5980de96325cbab639f5b2187357c flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 76050953ad5b70d7e09a6ca55558db92 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c xdg-utils baea6080dd821f5562d715887954c9d3 _md5_=d6d5b7ba215fd8eaf51d3847f4051df6 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index 0727b5436dcc..4eadcfc40dfe 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack c61c368a76fdf3a82fdf8dbaebea3804 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib c19072c3cd7ac5cb21de013f7e9832e0 preserve-libs 21162ec96c87041004a75348d97342dd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c +_eclasses_=desktop 021728fdc1b03b36357dbc89489e0f0d edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 2b02655f061dfa25067b543539110259 eqawarn c9847c43b3253a276ae2eabddedab3d7 estack c61c368a76fdf3a82fdf8dbaebea3804 eutils 8f942ebdcf04334697649d4a0bf65a32 flag-o-matic ad475baa777c9978fa035216c8264a10 ltprune 97143780d341cc8d8f1d4c6187a36d29 multilib c19072c3cd7ac5cb21de013f7e9832e0 preserve-libs 21162ec96c87041004a75348d97342dd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 1aad5c010cfdf11d0376c80467b0de4c wrapper 4a1902f969e5718126434fc35f3a0d9c _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index 9c7fbac46096..338bfc7b27af 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -11,5 +11,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=autotools 6ae9a4347149b19a112caa1182d03bde flag-o-matic ad475baa777c9978fa035216c8264a10 gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 9d3a9a889a6fa62ae794f817c156491b multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 64246799d443..d0d54b699ccf 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=flag-o-matic 16483e58fadb0d47b4528f0aa7e171f6 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c +_eclasses_=flag-o-matic ad475baa777c9978fa035216c8264a10 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs 513c31b3346458ed1f3878b57da6d61c _md5_=f48eb0348a1ac91d41dde22d3ced2ea1 |