diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
66 files changed, 65 insertions, 65 deletions
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index c4b096652215..29922b189b2e 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] app-admin/webapp-config SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 unpacker 2e16b7d5aafeda049669c53c05ce03c9 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 60f2eb31dec733d05e8114cc078ebc33 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 8eed4e2982026c684ff7c19cd4c88ed0 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 unpacker 697382d119fd3d195f110b7979184285 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp cbf94d7383f416c5ead4634aa89916a9 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=088b19055886b41078acab0f96df204a diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 index 644a7964373d..ebf31290889a 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 @@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(- REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz -_eclasses_=distutils-r1 d540d96908dd5622f3dfa41d167e632d eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 e91901adfcf0640d2daa4dc863ff5377 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index cfe2904ee76f..ed8016a028dd 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -10,5 +10,5 @@ PROPERTIES=live RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 -_eclasses_=distutils-r1 d540d96908dd5622f3dfa41d167e632d eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 e91901adfcf0640d2daa4dc863ff5377 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multibuild d26d81f242cb193d899a72bca423d0bd multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex a04711e5c76b..145c9cc60fe9 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4 index 0eeeb119a2cf..4be426098a3b 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.3.4 +++ b/metadata/md5-cache/sci-biology/abyss-2.3.4 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9a708eff89b221551fbb0bcc299ccfa3 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r4 b/metadata/md5-cache/sci-biology/amap-2.2-r4 index cedcc0204ba3..c5c61b928fe3 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r4 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 262d853e2dd1056dc103b953dfc113b9 java-pkg-opt-2 e5029f11aa150c447c7e006015f84356 java-utils-2 fe178a2da6b16798a2363acc5543dffa ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver 1a0a60ad07c8b32d2faba2d085dc0f24 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff java-ant-2 5cf479aa9e0ac9cc55899f2762c2aaa0 java-pkg-opt-2 a71433e535af8faae0c0f6c861a32054 java-utils-2 5faae27f317e090a61b74f53f5e0cbc9 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=857434504156a8892f1335babe24f9f0 diff --git a/metadata/md5-cache/sci-biology/augustus-3.4.0-r1 b/metadata/md5-cache/sci-biology/augustus-3.4.0-r1 index 579136e11c05..3904c332d135 100644 --- a/metadata/md5-cache/sci-biology/augustus-3.4.0-r1 +++ b/metadata/md5-cache/sci-biology/augustus-3.4.0-r1 @@ -10,5 +10,5 @@ LICENSE=Artistic RDEPEND=dev-db/sqlite:3 dev-db/mysql++ dev-db/mysql-connector-c dev-libs/boost:= sci-biology/bamtools sci-biology/samtools:0 sci-libs/gsl sci-libs/htslib sci-libs/suitesparse sci-mathematics/lpsolve sys-libs/zlib SLOT=0 SRC_URI=https://github.com/Gaius-Augustus/Augustus/archive/refs/tags/v3.4.0.tar.gz -> augustus-3.4.0.tar.gz -_eclasses_=docs 7c38d94fa7c1b4235fe571dc09e018df +_eclasses_=docs 8ed2a8a28ff109e7a3582c9abb7fe327 _md5_=f3105666a60b7910f0197729974b53d5 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index 31af53a32104..5e828e1666d4 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 75b95dc4ec4b..e5bd683c54a0 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -8,5 +8,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 git-r3 b9ac6f96d2a88edb5b351df634dc5e53 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.13 b/metadata/md5-cache/sci-biology/bcftools-1.13 index bd3e43a7dcea..dbde7ac87797 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.13 +++ b/metadata/md5-cache/sci-biology/bcftools-1.13 @@ -11,5 +11,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.13/bcftools-1.13.tar.bz2 -_eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 3c5721adc30f98c39739c5970a4762d8 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a7d6aa14a25dfbfd5fa4547dea06070c diff --git a/metadata/md5-cache/sci-biology/bcftools-1.15 b/metadata/md5-cache/sci-biology/bcftools-1.15 index 3eca78c35f9b..8bcef8e78168 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.15 +++ b/metadata/md5-cache/sci-biology/bcftools-1.15 @@ -11,5 +11,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.15/bcftools-1.15.tar.bz2 -_eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 3c5721adc30f98c39739c5970a4762d8 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=2b2091a43195aec58a417e5334bfa2fc diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index f9d919be7efe..4e78c5c4f2c5 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 54666a8fa603df658d9284845fc3d755 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-any-r1 9006edf4b9c90f9ba1dc9ea9fee1b0bd python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=14bf1e3697276975f4e8b47a297b1bf5 diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 3a9dea62a73e..0e8da3ce52a3 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index b9441f250422..aea3bb0b89a8 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index 25d7850f1727..0f54a65b4059 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=distutils-r1 d540d96908dd5622f3dfa41d167e632d eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 e91901adfcf0640d2daa4dc863ff5377 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild d26d81f242cb193d899a72bca423d0bd multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=6e4b8600d4f3c3ac26b099a9c4577ca0 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 index 10bc7efe4295..f9e3f340b466 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9-r1 @@ -13,5 +13,5 @@ REQUIRED_USE=minimal? ( !graphviz ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 readme.gentoo-r1 eebd0164fe61f4f7b64a683e83fdceb1 +_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 8eed4e2982026c684ff7c19cd4c88ed0 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 _md5_=e2bc1ba3ce7d3071e3bfff1ff59b93fa diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 index 5a8da3f85173..945635e972a3 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 +_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 8eed4e2982026c684ff7c19cd4c88ed0 _md5_=014aeb00c18e1619bc28c3cc890bf145 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 index 3ce0de4c127b..adc700ac1060 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9-r1 @@ -11,5 +11,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:= RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 readme.gentoo-r1 eebd0164fe61f4f7b64a683e83fdceb1 +_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 8eed4e2982026c684ff7c19cd4c88ed0 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 _md5_=062cfc681671741bdf0ce203cd9f0854 diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 index 9d8225a25d6b..3e1bdae67a5f 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9-r1 @@ -11,5 +11,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test !test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module bd9574a79c5f0a347a9ea3db5ad9ca72 readme.gentoo-r1 eebd0164fe61f4f7b64a683e83fdceb1 +_eclasses_=multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 8eed4e2982026c684ff7c19cd4c88ed0 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 _md5_=89a50a53d48e4dddb7f36a35c0407fdb diff --git a/metadata/md5-cache/sci-biology/biopython-1.79 b/metadata/md5-cache/sci-biology/biopython-1.79 index 427e6d79a4e8..c601508ae17c 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.79 +++ b/metadata/md5-cache/sci-biology/biopython-1.79 @@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.79.tar.gz -_eclasses_=distutils-r1 d540d96908dd5622f3dfa41d167e632d multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature 30ce9dec2b8943338c9b015bd32bac6a python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 e91901adfcf0640d2daa4dc863ff5377 multibuild d26d81f242cb193d899a72bca423d0bd multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature d524f291c80f9d21ad80fe978e3ca760 python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=4e2a43ec127b152970bd1c43306e9418 diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2 index d0390ad6b093..c253ec608dbd 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r2 +++ b/metadata/md5-cache/sci-biology/blat-34-r2 @@ -8,4 +8,4 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 -_md5_=cfc86b588e33e0935a06563d2a9c19c0 +_md5_=9fb0b819fe1d2fa16c86c748d885fc84 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.4.4 b/metadata/md5-cache/sci-biology/bowtie-2.4.4 index b6d183784cd2..46bd642eb9b1 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.4.4 +++ b/metadata/md5-cache/sci-biology/bowtie-2.4.4 @@ -11,5 +11,5 @@ RDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) p REQUIRED_USE=cpu_flags_x86_sse2 ^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.4.4/bowtie2-2.4.4-source.zip -_eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 3c5721adc30f98c39739c5970a4762d8 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a169406c93e64d9cae6cbb8ad262f62b diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index 20ee9b5e6030..30c3bdc48449 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ade45d2e283bc5fcc7eef16725e18ae diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index 68a840461d00..5d4af9fd54ef 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index 2b3eabdd435d..05e8ef674f92 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index c2b53af3291d..a92dc746cfe4 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index 66417c3e702f..81db5a8f412e 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index 8795c1abe908..9506f6697039 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index b545f53aec9e..40ce694b9946 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index c73ee208d6d4..4c5487683ecd 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=95026ca22c2bacedf52a70b4428e7753 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index 1454f153f029..23143f7c9b47 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index 95953264c1fe..e78a602bdd9d 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index d955f15722e5..b3a64869d696 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=b6d66fbfe89f6c64f635551357dc90f4 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index d1aa8fc78f95..996437573e64 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=93c762366f9cfe8fbfdffd0fdc0483d5 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index 59be57a74f69..54fa2b4fba0f 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index 491c2fd4a82b..643200fe18d4 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index 9fa033a9195c..43a78ccc59cf 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index 0dcefc37cbab..9a3d2180a806 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 index 21a0db8553a2..c8c86bfe52d7 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 @@ -11,5 +11,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 readme.gentoo-r1 eebd0164fe61f4f7b64a683e83fdceb1 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9856dbbe227d34ba8fd5a46c30dc912f diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 673e09fcfb0c..ad2631814121 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=683d1e7f9daeda6cd20b92117330ea81 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index 6014f088edb1..c223fe6b6813 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=05c99b447503c7a3fae4594cd126939a diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 85baf5421536..8876d65d8666 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=b4fcbc714ea460615318f4baa4bc347a diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index 75a19a52f07b..7ca73c4e634f 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -10,4 +10,4 @@ RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz _eclasses_=flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 -_md5_=8b14cc52861a94b12ee8505f2306234d +_md5_=741f3be1a17b816aabab39443236f37b diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index 994b8534f962..b0404e7a4b38 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 index bbfa93dd8337..59fb040acfda 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 @@ -8,5 +8,5 @@ LICENSE=AGPL-3 RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c3bb0edd6b01a31019cf5fd59e22122a diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 43d1b34eda57..65d57d82a78f 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,4 +8,4 @@ RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz _eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 -_md5_=f30d3e570cfa5c3e8efb2a7c44bc15e7 +_md5_=a7e8ed9c8bc30ed68f4fc465709c2e3d diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index b0a3bbff7d58..24e1574027b2 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index 988925272788..0634239cb904 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -11,5 +11,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 index 2ad6f2ef8738..1f8b9b4d7cff 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=867c9b9e4eee26ad2a76ff6ff0594f52 diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index 61e5806f39e0..283813a57b48 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index 05a2495f8ba3..51777a47231f 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index d337086e8e1a..2d37cdd4c56a 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 0e4e11890415..7166a83cda7e 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,4 +7,4 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz _eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-snapshot 19dc666868420457132a7514d4621476 wrapper 4251d4c84c25f59094fd557e0063a974 -_md5_=73304a1404ed3e3b66ccd621d32cd6db +_md5_=986f3a07cbf0dd1e4d247e0f7a43eb56 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 7dfbbdc416e3..3e5a299ac977 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 a85daa133d055abaa5ec7504ab4a4c27 multilib de4beb52bfa93c4c5d96792a6b5e1784 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d multilib de4beb52bfa93c4c5d96792a6b5e1784 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2a931ea6d0536a0cb3441d235f5d2d6b diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 798b862af35c..5b53e8cec9ba 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,4 +10,4 @@ RDEPEND=sys-libs/ncurses:= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:= SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 -_md5_=934b64005f56b5809a9cbbdf69aab63b +_md5_=5905565f0c29b3c7b9098cfb7a50e760 diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index 39cd50e73e7f..7145d77a6b17 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -10,5 +10,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 6b88b7e663ec..4d1aa1c9ae46 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -10,4 +10,4 @@ RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip _eclasses_=multilib de4beb52bfa93c4c5d96792a6b5e1784 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 -_md5_=e839f5daef081dde4b2d3e0417010738 +_md5_=419587bbc06b4b3717534c9c0148238b diff --git a/metadata/md5-cache/sci-biology/pysam-0.17.0 b/metadata/md5-cache/sci-biology/pysam-0.17.0 index f0eeb0c00d8b..33e04e0e5d1a 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.17.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.17.0 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.17.0.tar.gz -> pysam-0.17.0.tar.gz -_eclasses_=distutils-r1 d540d96908dd5622f3dfa41d167e632d multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 python-utils-r1 d3d7da5aff94a677154819e0cb95ee36 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=distutils-r1 e91901adfcf0640d2daa4dc863ff5377 multibuild d26d81f242cb193d899a72bca423d0bd multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 8638751691200e941f26fe0ac3aef1d1 python-utils-r1 dfa3a38467793e97fcf791b156510654 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=5afaf93aeaee2506b60aa22aac9b3a2c diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 index 3f4ed9c61a6f..4057787f8291 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seq REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d26d81f242cb193d899a72bca423d0bd multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=8796fa7c1594d16d8a9b96920de5cf2b diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index fce49c854575..3c9ba78d4e62 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=79bf85e28c26de53181c27b102f90252 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index e8ffa99a0ce5..a22e28a727b1 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 7e8a20d3bacea0e3ecf6e96fb72180aa +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6 _md5_=14493f936bb599dd7faec748cece70f3 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 57c0a2566352..f0c478b9e7ac 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake 9f12546ab831b81c615d90e6b9e34e68 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils a4dab848a4490e8e48cf0baab3e61bc2 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils 4f29a8b760a594a212abe9c2ba957c31 +_eclasses_=cmake 3c38df051095289667b6f09ebd0cc149 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multilib de4beb52bfa93c4c5d96792a6b5e1784 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils fef481272d4a8e136a7d8a0fb1329384 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e _md5_=421c75fd545cd9d38575321e00aeab36 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index 21fc53c7b75f..e75469117c27 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp 60f2eb31dec733d05e8114cc078ebc33 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 webapp cbf94d7383f416c5ead4634aa89916a9 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index f25dfc9ed640..d7bd0fb4f83c 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 perl-functions fea344a91ebf37efadf172c6a3de5a72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 perl-functions fea344a91ebf37efadf172c6a3de5a72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=82adffd84f2a93745e683b498b79fbe8 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index 0ad052d6f83b..f28cc53418fd 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -10,5 +10,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 perl-functions fea344a91ebf37efadf172c6a3de5a72 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e flag-o-matic a500d7cc40da3de38c361e889153bdf7 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib de4beb52bfa93c4c5d96792a6b5e1784 perl-functions fea344a91ebf37efadf172c6a3de5a72 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index efcd16568537..88da497e7a0f 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools 6cc26735fa9dd59e8c62880beda05b6e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools ed3ef2014ee93d24bde80f0c0ea9732e desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib de4beb52bfa93c4c5d96792a6b5e1784 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |