diff options
Diffstat (limited to 'dev-python/scipy')
| -rw-r--r-- | dev-python/scipy/Manifest | 2 | ||||
| -rw-r--r-- | dev-python/scipy/scipy-1.12.0.ebuild | 151 |
2 files changed, 153 insertions, 0 deletions
diff --git a/dev-python/scipy/Manifest b/dev-python/scipy/Manifest index dba1d48952de..287b7ed1fd6e 100644 --- a/dev-python/scipy/Manifest +++ b/dev-python/scipy/Manifest @@ -1,7 +1,9 @@ DIST scipy-1.11.3.tar.gz 56335652 BLAKE2B 2b35c24522b2bd498b4ebe84a854c8ec1e62917e7b899b3e3526abb9780c1e56f8e776a3bb1eab1bedb17a273fac881e5ffdaac808084a4f5a5f97428bff1029 SHA512 6491c4e479d9f4f02e677396a25ddca947a0dc6c009fc2ec34c658012a6224c0b535f14045bb011fbde9973ea987d184574ed64e6760c31798ec860eb0896fcf DIST scipy-1.11.4.tar.gz 56336202 BLAKE2B a2091a1edb54eb73c2de6ed8c62a7e571f37b247c9af50947aa97b739342c96b87b20a82b1a238c859fa532c84249cbadde228366dcea3555e9a506c1ae55031 SHA512 2eb403f6de9723b411d948b8e1b5457078704c605b8e760d42362c82d802e167eaaf701ddb8b480af2bdf2efe4dbf66fcc4e97321519bb8dab19b0e2a8976beb +DIST scipy-1.12.0.tar.gz 56811768 BLAKE2B 03c142274f1466747935fa54fab427f3a48c1642406211fa1a0f8ad5e0f194baecf76182e0448a0fb647063871483239cd876ce431cd9406e396e6170912ab64 SHA512 376ed94c4caaf782814bb07047fff0b363f7b608a0399697c6e862432333cbe6d3abb351730a574a3f077b3cdd9cb7474090a460baffcfbd5546bcfee309b6e7 DIST scipy-html-1.11.0.zip 50421508 BLAKE2B cb5e4a4f8817a80f54ae73b4a47ba22d2438df46ebfe27ef5fdc2695fdd983226f4ccae925bf82b15d01ced4f4b6807384ecadac5e1aa7700aa887ad06b7d065 SHA512 33718bbd5e828687d93fccc441a53b6a2e8f54ac4952d3b69d4c4668f55cb6ef5aba33df9acda20b2400effa5ae71767b2a5602a365ad2045a6edd24ff89c253 DIST scipy-html-1.11.2.zip 50435722 BLAKE2B 460c67509a8bf50986f866ee2f90e634af21ddd71508efeef5681c2ee2130c3f79b4b428bc21277bfb310bb45ccad1fb38221ada43620055377cdc4839b9d1e5 SHA512 986a6e37f9e01dc4925ef22af6ff660bae1e4b66e57270262974c207dfb70285e3f8f548774d6e81d5f457b9198c0ba1c06e6d689fe5d54fdea878c1e5a7f797 EBUILD scipy-1.11.3-r1.ebuild 3646 BLAKE2B 4b1ad2969bce3110bb1734c3ed19393c6aa381205924c1f4a914ef31c63ee267660f67503b20f739fe8012d9dd4755f8ba11637bab7c41e2bb86c47098bf9f4c SHA512 b2cbf391998945662d69515dfb275837067bd9e011e038c0f63ae9314e4d3b2d22f9658f70a61a7b493e99cfdc3454e16367b7793d05f2c02b53943f6cc70fe4 EBUILD scipy-1.11.4.ebuild 3658 BLAKE2B b7c48e8a930fb4316e872fc79674dc01e4d108f96eed892996b2b2ce3f1bc935a50cd21a1b9a17e72ac7e23ae5fdff202d3b9c24bf0d883516381225939ba326 SHA512 d5382769130b623ce7e80f16074bc6bff21078c1431d53081c4a2ff6372950c7123850ac9e464f1697047e76fdbf5e31c4317ce4ce50e0a8d78d082ec279cc71 +EBUILD scipy-1.12.0.ebuild 3621 BLAKE2B ff96f550275f3a4a34548977a2d260c7fbd8126a41a7a3a75cff528f35d048db3aa7be83e26d47b814e61c7543332f168b0e3d2c97359ab55a9fb33d0dd6111f SHA512 4a0742d8e5547db2599c052e6964a4ebef08fb4b92528c5344d746319044b1de75c40a973056e1ca3b35b1aad0ef289e7482690c1ceedc9b8f20a2cc1352fd35 MISC metadata.xml 953 BLAKE2B a09ea1325a175e349fbc3ca77c5e7b373538ea01147e8544f44b7d4e0c55fbbc2012431fcfe9a3457e82d295e4b5630df1ed69c48ef3462ed9b157af30a1e09a SHA512 74a21c6e1a9bef95b3d74a9513c59d302f473725c04fa32a9991b6108113c0f4b78179ce4a628140e7aa870c24ca60bddf7a00063b6b73dd45110112311371d8 diff --git a/dev-python/scipy/scipy-1.12.0.ebuild b/dev-python/scipy/scipy-1.12.0.ebuild new file mode 100644 index 000000000000..2a9cb0843716 --- /dev/null +++ b/dev-python/scipy/scipy-1.12.0.ebuild @@ -0,0 +1,151 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +FORTRAN_NEEDED=fortran +DISTUTILS_EXT=1 +DISTUTILS_USE_PEP517=meson-python +PYTHON_COMPAT=( pypy3 python3_{10..12} ) +PYTHON_REQ_USE="threads(+)" + +inherit flag-o-matic fortran-2 distutils-r1 + +DESCRIPTION="Scientific algorithms library for Python" +HOMEPAGE=" + https://scipy.org/ + https://github.com/scipy/scipy/ + https://pypi.org/project/scipy/ +" + +if [[ ${PV} == *9999* ]] ; then + inherit git-r3 + + # Need submodules, so git for now. + EGIT_REPO_URI="https://github.com/scipy/scipy" + EGIT_BRANCH="maintenance/$(ver_cut 1-2).x" + EGIT_SUBMODULES=( '*' ) +else + inherit pypi + + # Upstream is often behind with doc updates + #DOC_PV=${PV} + DOC_PV=1.11.2 + + SRC_URI+=" + doc? ( + https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip + )" + + if [[ ${PV} != *rc* ]] ; then + KEYWORDS="~amd64 ~arm ~arm64 ~loong ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86" + fi +fi + +LICENSE="BSD LGPL-2" +SLOT="0" +IUSE="doc +fortran test-rust" + +# umfpack is technically optional but it's preferred to have it available. +DEPEND=" + >=dev-python/numpy-1.21.6[lapack,${PYTHON_USEDEP}] + sci-libs/arpack:= + sci-libs/umfpack + virtual/cblas + >=virtual/lapack-3.8 +" +RDEPEND=" + ${DEPEND} + dev-python/pillow[${PYTHON_USEDEP}] +" +BDEPEND=" + dev-lang/swig + >=dev-python/cython-0.29.35[${PYTHON_USEDEP}] + >=dev-python/meson-python-0.12.1[${PYTHON_USEDEP}] + >=dev-python/pybind11-2.10.4[${PYTHON_USEDEP}] + >=dev-build/meson-1.1.0 + !kernel_Darwin? ( dev-util/patchelf ) + virtual/pkgconfig + doc? ( app-arch/unzip ) + fortran? ( dev-python/pythran[${PYTHON_USEDEP}] ) + test? ( + dev-python/hypothesis[${PYTHON_USEDEP}] + ) + test-rust? ( + dev-python/pooch[${PYTHON_USEDEP}] + ) +" + +EPYTEST_XDIST=1 +distutils_enable_tests pytest + +src_unpack() { + default + + if use doc; then + unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die + fi +} + +python_configure_all() { + # https://github.com/scipy/scipy/pull/19857 + # Fixed in 1.13.0 + filter-lto + DISTUTILS_ARGS=( + -Dblas=blas + -Dlapack=lapack + -Duse-pythran=$(usex fortran true false) + ) +} + +python_test() { + cd "${BUILD_DIR}/install$(python_get_sitedir)" || die + + local EPYTEST_DESELECT=( + # Network + scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all + scipy/datasets/tests/test_data.py::TestDatasets::test_ascent + scipy/datasets/tests/test_data.py::TestDatasets::test_face + scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram + + # Precision issue with diff. blas? + scipy/optimize/tests/test__basinhopping.py::Test_Metropolis::test_gh7799 + + # Crashes with assertion, not a regression + # https://github.com/scipy/scipy/issues/19321 + scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object + + # timeouts + scipy/sparse/linalg/tests/test_propack.py::test_examples + # hang or incredibly slow + scipy/optimize/tests/test_lsq_linear.py::TestBVLS::test_large_rank_deficient + scipy/optimize/tests/test_lsq_linear.py::TestTRF::test_large_rank_deficient + ) + local EPYTEST_IGNORE=() + + if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then + EPYTEST_IGNORE+=( + scipy/datasets/tests/test_data.py + ) + fi + + case ${EPYTHON} in + pypy3) + EPYTEST_DESELECT+=( + # fd leaks in tests + # https://github.com/scipy/scipy/issues/19553 + scipy/fft/_pocketfft/tests/test_real_transforms.py + # TODO + 'scipy/special/tests/test_data.py::test_boost[<Data for expi: expinti_data_long_ipp-expinti_data_long>]' + ) + ;; + esac + + epytest scipy +} + +python_install_all() { + use doc && local HTML_DOCS=( "${WORKDIR}"/html/. ) + + distutils-r1_python_install_all +} |