diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-visualization/circos | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-visualization/circos')
| -rw-r--r-- | sci-visualization/circos/Manifest | 5 | ||||
| -rw-r--r-- | sci-visualization/circos/circos-0.55-r1.ebuild | 42 | ||||
| -rw-r--r-- | sci-visualization/circos/metadata.xml | 16 |
3 files changed, 63 insertions, 0 deletions
diff --git a/sci-visualization/circos/Manifest b/sci-visualization/circos/Manifest new file mode 100644 index 000000000000..66fa706056e8 --- /dev/null +++ b/sci-visualization/circos/Manifest @@ -0,0 +1,5 @@ +DIST circos-0.55.tgz 10163948 SHA256 3c9f3302b7becb8300d31153d9f8db5552491cb21f5b4cb2f3dc4ca9fd2a362d SHA512 3ebad082acd96b27281e6fcd996fb79022d982a93db59e1f3589a341df7f9855d7554fb92c88c41dc4679e7273d11c0372285a4059ec14a77f11d1d4014db9c1 WHIRLPOOL 4c242fbea59095f24d08eb18c9c9e145e6c7b783581297698a8b21d702019d621709a233bf4ba06928f00ced4eb9e50674f338d12265eaf948533a7ef0a2e251 +EBUILD circos-0.55-r1.ebuild 930 SHA256 8008690a51754cca123d5af1eec0384eda530bdd43dd2da829d702392181b96d SHA512 15d004ce7c0fe3d9f9039e9a9dbb664bf988cd8b7a3db7f8185069227879f594cca779ccec6c8864fd81b6e13bf1d7f587ef3abd273b3d41d95d94c5f4d5e1fd WHIRLPOOL b380d30c2df591b996e22a7aba33d137b0c24fcca27ee3433a43d04d90d5e463fa8b33d1a6c4bb9b5c2764b05b4e5819654477db62099e86f9a5abe00078a606 +MISC ChangeLog 2766 SHA256 410d8c2cabcd45b16bafe49d682f7b1a2ec2e2faf12fb70d6dbb553e877e3c60 SHA512 c2f28b9119e0c97d21f7199ce1d68a0a9dc404112abb79eb26575258596ab135b6bb1868ce8e029f690a788e748e8a513c3b213106c687e9389efab9f13cf9ea WHIRLPOOL 50054cd17952ed34a603abce24495d81f5b37ad883c7ca2f97b6e11975da29ddfc58e6f10999e78e33ba361ce9f39f252919081a0e09665270050bc352ad8b40 +MISC ChangeLog-2015 1069 SHA256 5d79d1c12529044e49c089c5077723aab51e10be39c91c8d8b950f03ecc5a2a5 SHA512 a77186904b64d52271ffad2d4a6151c7d07b1c24e3f5da686401e95dfacc55cd283fcb26c96cc1fde76faa5bf9d8de95700c6bc3375007e32d8b5f01686faf5e WHIRLPOOL 0c61651856504a5aebfb672c3ca12169d5e1d915b73e550b1dd3ead66443c177213540911b47228c98987801624c2c777df400df6d83e0a2cc3f85ad0c648561 +MISC metadata.xml 697 SHA256 11e3650377dc357d8b8b31e0f519e3841933a01e1be9e1a46fa1888e6d8d27e5 SHA512 32c161f3f9ed0df4281de0e7049133eefd48391f6316a1c70f02a0c5e406279834d39029cc72de7d46745f6bbd4690622dc917d0a09556683527de5cb082677b WHIRLPOOL b83ac3c296fdb8928d7acbef3a2ad985a8396682135ecf24a3b9c32babd8c425427792e285cde52228a096c81313e3a31e9c5b8228c4ebb44ef350fdda4dc05e diff --git a/sci-visualization/circos/circos-0.55-r1.ebuild b/sci-visualization/circos/circos-0.55-r1.ebuild new file mode 100644 index 000000000000..bfac5b3544a9 --- /dev/null +++ b/sci-visualization/circos/circos-0.55-r1.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +DESCRIPTION="Circular layout visualization of genomic and other data" +HOMEPAGE="http://mkweb.bcgsc.ca/circos/" +SRC_URI="http://mkweb.bcgsc.ca/circos/distribution/${P}.tgz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" + +DEPEND="dev-perl/Config-General + dev-perl/GD + dev-perl/Math-Bezier + dev-perl/Math-Round + dev-perl/Math-VecStat + dev-perl/Params-Validate + dev-perl/Readonly + dev-perl/Regexp-Common + >=dev-perl/Set-IntSpan-1.11 + dev-perl/Graphics-ColorObject + dev-perl/List-MoreUtils" +RDEPEND="${DEPEND}" + +src_install() { + insinto /opt/${PN} + doins -r */ + + exeinto /opt/${PN}/bin + doexe bin/circos bin/gddiag + + dosym /opt/${PN}/bin/circos /usr/bin/circos + + einstalldocs + local d + while IFS="" read -d $'\0' -r d; do + dodoc "${d}" + done < <(find * -maxdepth 0 -type f -print0) +} diff --git a/sci-visualization/circos/metadata.xml b/sci-visualization/circos/metadata.xml new file mode 100644 index 000000000000..aafe35b94066 --- /dev/null +++ b/sci-visualization/circos/metadata.xml @@ -0,0 +1,16 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> +<longdescription> + Circos visualizes data in a circular layout — this makes Circos + ideal for exploring relationships between objects or + positions. Circos is ideal for creating publication-quality + infographics and illustrations with a high data-to-ink ratio, richly + layered data and pleasant symmetries. You have fine control each element + in the figure to tailor its focus points and detail to your audience. +</longdescription> +</pkgmetadata> |