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author | V3n3RiX <venerix@koprulu.sector> | 2024-04-23 23:59:27 +0100 |
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committer | V3n3RiX <venerix@koprulu.sector> | 2024-04-23 23:59:27 +0100 |
commit | e3f21c8aff8a76afe3423721c437a088e9232840 (patch) | |
tree | fde2c1906a9787adec106c5d6b708cd60de02c60 /sci-mathematics/petsc/petsc-3.19.1.ebuild | |
parent | 1f00990debeffd0052c194989d0a02baac23eb96 (diff) |
gentoo auto-resync : 23:04:2024 - 23:59:26
Diffstat (limited to 'sci-mathematics/petsc/petsc-3.19.1.ebuild')
-rw-r--r-- | sci-mathematics/petsc/petsc-3.19.1.ebuild | 235 |
1 files changed, 0 insertions, 235 deletions
diff --git a/sci-mathematics/petsc/petsc-3.19.1.ebuild b/sci-mathematics/petsc/petsc-3.19.1.ebuild deleted file mode 100644 index 30f4763b16a3..000000000000 --- a/sci-mathematics/petsc/petsc-3.19.1.ebuild +++ /dev/null @@ -1,235 +0,0 @@ -# Copyright 1999-2024 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -PYTHON_COMPAT=( python3_{10..11} pypy3 ) - -inherit flag-o-matic fortran-2 python-any-r1 toolchain-funcs - -DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation" -HOMEPAGE="https://www.mcs.anl.gov/petsc" -SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${P}.tar.gz" - -LICENSE="BSD-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="afterimage boost complex-scalars debug +examples fftw -fortran hdf5 hypre int64 mpi metis mumps scotch superlu threads X" - -# readd sparse when suitesparse-5.6.0 is in tree -# sparse? ( >=sci-libs/suitesparse-5.6.0 >=sci-libs/cholmod-1.7.0 ) -# $(use_with sparse suitesparse) \ -RDEPEND=" - virtual/blas - virtual/lapack - - afterimage? ( media-libs/libafterimage ) - boost? ( dev-libs/boost ) - fftw? ( sci-libs/fftw:3.0[mpi?] ) - hdf5? ( sci-libs/hdf5[mpi?] ) - hypre? ( >=sci-libs/hypre-2.18.0[int64?,mpi?] ) - metis? ( >=sci-libs/parmetis-4 ) - mpi? ( virtual/mpi[fortran?] ) - mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack ) - scotch? ( sci-libs/scotch[int64?,mpi?] ) - superlu? ( >=sci-libs/superlu-5 ) - X? ( x11-libs/libX11 ) -" -DEPEND=" - ${RDEPEND} - ${PYTHON_DEPS} -" -BDEPEND=" - dev-build/cmake - virtual/pkgconfig -" - -# hypre and superlu curretly exclude each other due to missing linking to hypre -# if both are enabled -REQUIRED_USE=" - afterimage? ( X ) - complex-scalars? ( !hypre !superlu ) - fftw? ( mpi ) - hdf5? ( mpi ) - hypre? ( mpi !superlu ) - mumps? ( mpi scotch ) - scotch? ( mpi ) - superlu? ( !hypre ) -" -PATCHES=( - "${FILESDIR}/${PN}-3.7.0-disable-rpath.patch" - "${FILESDIR}"/${PN}-3.16.0-fix_sandbox_violation.patch -) - -# petsc uses --with-blah=1 and --with-blah=0 to en/disable options -petsc_enable() { - use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0" -} -# add external library: -# petsc_with use_flag libname libdir -# petsc_with use_flag libname include linking_libs -petsc_with() { - local myuse p=${2:-${1}} - if use ${1}; then - myuse="--with-${p}=1" - if [[ $# -ge 4 ]]; then - myuse="${myuse} --with-${p}-include=${EPREFIX}${3}" - shift 3 - myuse="${myuse} --with-${p}-lib=$@" - else - myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}" - fi - else - myuse="--with-${p}=0" - fi - echo ${myuse} -} - -# select between configure options depending on use flag -petsc_select() { - use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4" -} - -src_configure() { - # bug 548498 - # PETSc runs mpi processes during configure that result in a sandbox - # violation by trying to open /proc/mtrr rw. This is not easy to - # mitigate because it happens in libpciaccess.so called by libhwloc.so, - # which is used by libmpi.so. - addpredict /proc/mtrr - # if mpi is built with knem support it needs /dev/knem too - addpredict /dev/knem - - # configureMPITypes with openmpi-2* insists on accessing the scaling - # governor rw. - addpredict /sys/devices/system/cpu/ - - # bug 771711 - # configureMPIEXEC and configureMPITypes access /dev/nvidiactl - addpredict /dev/nvidiactl - - # bug 810841 - addpredict /dev/kfd - - local myopt - - use debug && myopt="debug" || myopt="opt" - - # environmental variables expected by petsc during build - - export PETSC_DIR="${S}" - export PETSC_ARCH="linux-gnu-c-${myopt}" - - if use debug; then - strip-flags - filter-flags -O* - fi - - tc-export AR RANLIB - - # C Support on CXX builds is enabled if possible i.e. when not using - # complex scalars (no complex type for both available at the same time) - - econf \ - scrollOutput=1 \ - AR="${AR}" \ - CFLAGS="${CFLAGS} -fPIC" \ - CPPFLAGS="${CPPFLAGS}" \ - CXXFLAGS="${CXXFLAGS} -fPIC" \ - CXXOPTFLAGS="${CXXFLAGS} -fPIC" \ - FCFLAGS="${FCFLAGS} -fPIC" \ - FFLAGS="${FFLAGS} -fPIC" \ - LDFLAGS="${LDFLAGS}" \ - MAKEFLAGS="${MAKEFLAGS}" \ - RANLIB="${RANLIB}" \ - --prefix="${EPREFIX}/usr/$(get_libdir)/petscdir/" \ - --with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs blas lapack)" \ - --with-cmake:BOOL=1 \ - --with-gnu-compilers \ - --with-imagemagick=0 \ - --with-petsc-arch="${PETSC_ARCH}" \ - --with-precision=double \ - --with-python=0 \ - --with-shared-libraries \ - --with-single-library \ - --with-windows-graphics=0 \ - $(petsc_enable debug debugging) \ - $(petsc_enable fortran) \ - $(petsc_enable mpi) \ - $(petsc_enable mpi mpi-compilers) \ - $(petsc_enable threads pthread) \ - $(petsc_select complex-scalars scalar-type complex real) \ - $(petsc_select mpi cc mpicc $(tc-getCC)) \ - $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \ - $(petsc_with afterimage afterimage /usr/include/libAfterImage -lAfterImage) \ - $(petsc_with hypre hypre /usr/include/hypre -lHYPRE) \ - $(petsc_with superlu superlu /usr/include/superlu -lsuperlu) \ - $(petsc_with scotch ptscotch /usr/include/scotch [-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \ - $(petsc_with mumps scalapack /usr/include/scalapack -lscalapack) \ - $(petsc_with mumps mumps /usr/include [-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \ - $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \ - $(use int64 && echo "--with-index-size=64") \ - $(use_with boost) \ - $(use_with fftw) \ - $(use_with hdf5) \ - $(use_with X x) \ - $(use_with X x11) -} - -src_install() { - emake DESTDIR="${ED}" install - - # - # Clean up the mess: - # - - # put all include directories under a proper subdirectory - mkdir "${ED}"/usr/include || die "mkdir failed (include)" - mv "${ED}"/usr/{$(get_libdir)/petscdir/include,include/petsc} || die "mv failed (include)" - - # put libraries and pkconfig file into proper place - mv "${ED}"/usr/$(get_libdir)/petscdir/lib/{libpetsc*,pkgconfig} \ - "${ED}/usr/$(get_libdir)" || die "mv failed (lib)" - - # move share to proper location - mv "${ED}"/usr/{$(get_libdir)/petscdir/share,share} || die "mv failed (share)" - - # fix pc files: - sed -i \ - -e 's#include$#include/petsc#' \ - -e "s#lib\$#$(get_libdir)#" \ - -e "s#^prefix=.*petscdir\$#prefix=${EPREFIX}/usr#" \ - "${ED}"/usr/$(get_libdir)/pkgconfig/*.pc || die "sed failed (pkgconfig)" - - # recreate a "valid" petscdir: - for i in "${ED}"/usr/$(get_libdir)/*; do - [ $(basename $i) = petscdir ] && continue - ln -s "${EPREFIX}/usr/$(get_libdir)/$(basename $i)" \ - "${ED}/usr/$(get_libdir)/petscdir/lib/$(basename $i)" || die "ln failed (petscdir)" - done - ln -s "${EPREFIX}"/usr/include/petsc/ \ - "${ED}/usr/$(get_libdir)/petscdir/include" || die "ln failed (petscdir)" - mkdir "${ED}/usr/$(get_libdir)/petscdir/share" || die "mkdir fialed (petscdir)" - ln -s "${EPREFIX}"/usr/share/petsc/ \ - "${ED}/usr/$(get_libdir)/petscdir/share/petsc" || die "ln failed (petscdir)" - - # automatically symlink petsc matlab modules: - mkdir -p "${ED}"/usr/share/octave/site/m/ - ln -s "${EPREFIX}"/usr/share/petsc/matlab "${ED}"/usr/share/octave/site/m/petsc || die "ln failed (matlab)" - - if use examples; then - mkdir -p "${ED}"/usr/share/doc/${PF} || die "mkdir failed (examples)" - mv "${ED}"/usr/share/petsc/examples "${ED}"/usr/share/doc/${PF} || die "mv failed (examples)" - ln -s "${EPREFIX}"/usr/share/doc/${PF}/examples "${ED}"/usr/share/petsc/examples || die "ln failed (examples)" - docompress -x /usr/share/doc/${PF}/examples - else - rm -r "${ED}"/usr/share/petsc/examples || die "rm failed (examples)" - fi - - # add PETSC_DIR to environmental variables - cat >> 99petsc <<- EOF - PETSC_DIR=${EPREFIX}/usr/$(get_libdir)/petscdir - EOF - doenvd 99petsc -} |