diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-libs/htslib | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-libs/htslib')
| -rw-r--r-- | sci-libs/htslib/Manifest | 5 | ||||
| -rw-r--r-- | sci-libs/htslib/htslib-1.5.ebuild | 37 | ||||
| -rw-r--r-- | sci-libs/htslib/metadata.xml | 11 |
3 files changed, 53 insertions, 0 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest new file mode 100644 index 000000000000..03d729ae2d3b --- /dev/null +++ b/sci-libs/htslib/Manifest @@ -0,0 +1,5 @@ +DIST htslib-1.5.tar.bz2 1051132 SHA256 a02b515ea51d86352b089c63d778fb5e8b9d784937cf157e587189cb97ad922d SHA512 fd58552ddbd178f9797123fdaf47914ccd0e2aefd055fc6557ac8f479c600775616107cfa871c3acd93079f45974a19f443941a79f2acfd2a8c2983ef35b8917 WHIRLPOOL fb7026c26816db6746006d1b5ade235ce10181a633c9bab8ed3d9f72aaa152d0b68fd69d8988d69fef2bd2d57f9676de0761b2577ef0dd1d334da5d028cb64ee +EBUILD htslib-1.5.ebuild 769 SHA256 b6d7dc3d9fc707a1d18f5157d4bb7589e5541424f46460ef9dbc38b7b06822eb SHA512 e5df03c2dfa5088743674af125f7464a6e2add8d9c092060d7ddfc914cac4cff16d65eabb35ca3c199290461b92f7424a4347fded4f76dce763801b2b70f91c2 WHIRLPOOL a099d967b3cf780b3bce8aa8be9a016f2a0cfeae3212c6de37129e56e0ec691a8f825a30081cb4e1dadc99cee954896f34658daafbc354c4f8f1977c1d4737c6 +MISC ChangeLog 2816 SHA256 29bb0a3893413645602a369cae4c5eea0017bb2d8bb145a2debed426f1ed54e3 SHA512 753eccc9e6fbed3655add25379760e605fe280b75fe46ecbb7b59045ef39a225c54d80eb5d4a3d2999db45bad687dfa11769c27e33ae99ae4ebc074deadca18c WHIRLPOOL 979d98bc8e8f68a452451563fed6da037099e75d0dd941bc9d7fb1f7fde6871af69ab5bfab1088a16ad0fb12887eb5b12c6cc0f5ea3bdb1276ef86569f116511 +MISC ChangeLog-2015 1160 SHA256 73ce61e91f307b805648f5a76f694a6be2e4bba9a07d175d80740b5d6d1cc11b SHA512 d35ebd96c9e5279128f823e55a4a7eb027a622c5f73f21cae3b151ea3f7d679ccea22057902dae21558a2ae57fb7aff865dca217b3fae7a6224418c55bbef239 WHIRLPOOL f407acf8a7d7ea3c988f227e871df7e549238d1e3c14f84b9f2672c7274b7142ebc6ee024233bdf4b19f5a8d7e0c41d4331a542899749f1e5b56e34d91628b25 +MISC metadata.xml 349 SHA256 2b207b1089e4524124ade2610609ccb62e9916556681e30816be2977103227c5 SHA512 9108691a0c4c68ececa5e93d1719b4a6fc42c423c0b7dca3c037007873a40c86a44610c54139c6868391bb903d509b0202a87640d7114815d07ef62e478ffce7 WHIRLPOOL f293efbaf02dd19229edb93b9a1de22b9b784402d1070b1da9acef285ff36d82d14785bf13ed3147a10a61f528879371957f1285b60f4613aa49e2839f3c19f0 diff --git a/sci-libs/htslib/htslib-1.5.ebuild b/sci-libs/htslib/htslib-1.5.ebuild new file mode 100644 index 000000000000..d9957ce3a171 --- /dev/null +++ b/sci-libs/htslib/htslib-1.5.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +DESCRIPTION="C library for high-throughput sequencing data formats" +HOMEPAGE="http://www.htslib.org/" +SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2" + +SLOT="0/2" +LICENSE="MIT" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="+bzip2 curl +lzma static-libs" + +RDEPEND=" + bzip2? ( app-arch/bzip2 ) + curl? ( net-misc/curl ) + lzma? ( app-arch/xz-utils )" +DEPEND="${RDEPEND}" + +src_configure() { + econf \ + --disable-gcs \ + --disable-plugins \ + --disable-s3 \ + $(use_enable bzip2 bz2) \ + $(use_enable curl libcurl) \ + $(use_enable lzma) +} + +src_install() { + default + + if ! use static-libs; then + find "${D}" -name '*.a' -delete || die + fi +} diff --git a/sci-libs/htslib/metadata.xml b/sci-libs/htslib/metadata.xml new file mode 100644 index 000000000000..5b953af488ad --- /dev/null +++ b/sci-libs/htslib/metadata.xml @@ -0,0 +1,11 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">samtools</remote-id> + </upstream> +</pkgmetadata> |