diff options
| author | V3n3RiX <venerix@koprulu.sector> | 2022-06-29 12:04:12 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@koprulu.sector> | 2022-06-29 12:04:12 +0100 |
| commit | 0f558761aa2dee1017b4751e4017205e015a9560 (patch) | |
| tree | 037df795519468a25d9362b4e95cdaeb84eb1cf9 /sci-libs/htslib | |
| parent | 752d6256e5204b958b0ef7905675a940b5e9172f (diff) | |
gentoo resync : 29.12.2022
Diffstat (limited to 'sci-libs/htslib')
| -rw-r--r-- | sci-libs/htslib/Manifest | 6 | ||||
| -rw-r--r-- | sci-libs/htslib/htslib-1.13.ebuild | 52 | ||||
| -rw-r--r-- | sci-libs/htslib/htslib-1.15.1.ebuild (renamed from sci-libs/htslib/htslib-1.15.ebuild) | 2 |
3 files changed, 3 insertions, 57 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest index 66510cf1b757..319557fa6017 100644 --- a/sci-libs/htslib/Manifest +++ b/sci-libs/htslib/Manifest @@ -1,5 +1,3 @@ -DIST htslib-1.13.tar.bz2 4226834 BLAKE2B ae1f64e564f0f7bea80ea9d276b5d5b2b04fa3c8bd58f2c68966225b4324962f34d8a26b74267ab90dc530dfced1b9c01702d25918fd7a7c74e13913f00d5007 SHA512 16a3d61c115b71406bc4411a0c1176909166b52c4f7bb11614e398df4defaec4d09763413053e4d0d5916921c866d20019096d8fed866e77f9f1cafbd1e95b16 -DIST htslib-1.15.tar.bz2 4141168 BLAKE2B 20462b01e065b65de2b7df883cf61f9beb9ccca6fa3dc159c0aa7b303daf7c3779938f5eadbd3320e85ec19de105dc55e238c47a922ff6ace6fcaea2b0e95c19 SHA512 b87ce3eaa63a731d812953129f1c9aa857fe896ea9e924b7eb92173d8e624dd45e5582b3a97e7120ff7fe339e4d40148077424029626f50372b3f164093aa6cc -EBUILD htslib-1.13.ebuild 1052 BLAKE2B 1d219220299500bce4aaf8927bde67beba02afda02319527cae8f3aa7ccce131a21c0b27e9eaa0ade634d99d910915108abd48385a9686a95795b74733f3c0ce SHA512 3d5bc8e165e27b5a5f1e0d87c7802e65c2de55bc7754cb13d5bcd5f2c211de37ecd81e8ebfa0377158eea196449d9b71858c08372ab73f30614e6e787af47005 -EBUILD htslib-1.15.ebuild 1052 BLAKE2B dda021a25b1066d6e0f79aabed974ed1d6b96bb78ebbf86741207ae61ee11b1b399895c3863b1bab59669812794a0e13372c4b824612dee4cdad00a0e57aa5b9 SHA512 68f35d2c93c397ec6034468d5a5a10ca5dca42f9954fc6e5ca3583a443014324e1b802b5f42d7851c277f8f1f86c544cf574d32fe813c06e985158a8c1ab0fc9 +DIST htslib-1.15.1.tar.bz2 4141140 BLAKE2B 312f67c8916586199b32b7703b43a9fd365b8af22802bf4d63fc40960c62b956915e7c60bbd777a8b179066608cd3a281929a10b60eef21d6eedb4caf8c147c1 SHA512 69d0c7f3ac50a9b9c579e9b3479b6745fc30d0ac838ff14695cf4e3da593854350e345ed1f4a496931ef57395f3416da4316903488f3e641f1e00fec544f3620 +EBUILD htslib-1.15.1.ebuild 1074 BLAKE2B d04ae956ac6d4819704e8342d9679d0c54274c09da155c6d73d0e889b3db75cfbbae80665e750c0d7387cf9eeeac7642ff31bbe301220cef06915d7081c3aa74 SHA512 6c617b18f47e2823077527653dcf2a6976577efde1481087d5188ce151089edc9a98343ef6ad3864117477c60531694287adae5def956f016d6e105445ae1963 MISC metadata.xml 350 BLAKE2B 6512256a4c692625cb824d90fc8b85942f88db717fd265548b97a5b535158fc65e1f2e74df4ebd3c2a259dfd3a4244a13493fc410b1663b8054b29a14995787d SHA512 926efc676b0619ae901253f2207c8ba948ebe3db560377a55edecd9cd58cd2ec806bcdff875e9c5c9a170921c44818271e8ddd691fe1a84ed651f7aca75265ec diff --git a/sci-libs/htslib/htslib-1.13.ebuild b/sci-libs/htslib/htslib-1.13.ebuild deleted file mode 100644 index cfd9cfb3263e..000000000000 --- a/sci-libs/htslib/htslib-1.13.ebuild +++ /dev/null @@ -1,52 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit toolchain-funcs - -DESCRIPTION="C library for high-throughput sequencing data formats" -HOMEPAGE="http://www.htslib.org/" -SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0/3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="+bzip2 curl +lzma" - -RDEPEND=" - sys-libs/zlib - bzip2? ( app-arch/bzip2 ) - curl? ( net-misc/curl ) - lzma? ( app-arch/xz-utils )" -DEPEND="${RDEPEND}" - -src_prepare() { - default - - # upstream injects LDFLAGS into the .pc file, - # which is a big nono for QA - sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \ - -i htslib.pc.in || die -} - -src_configure() { - econf \ - --disable-gcs \ - --disable-plugins \ - --disable-s3 \ - $(use_enable bzip2 bz2) \ - $(use_enable curl libcurl) \ - $(use_enable lzma) -} - -src_compile() { - emake AR="$(tc-getAR)" -} - -src_install() { - default - - # doesn't use libtool, can't disable static libraries - find "${ED}" -name '*.a' -delete || die -} diff --git a/sci-libs/htslib/htslib-1.15.ebuild b/sci-libs/htslib/htslib-1.15.1.ebuild index e651576d8a81..c4bd910685de 100644 --- a/sci-libs/htslib/htslib-1.15.ebuild +++ b/sci-libs/htslib/htslib-1.15.1.ebuild @@ -7,7 +7,7 @@ inherit toolchain-funcs DESCRIPTION="C library for high-throughput sequencing data formats" HOMEPAGE="http://www.htslib.org/" -SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2" +SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" LICENSE="MIT" SLOT="0/3" |