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author | V3n3RiX <venerix@redcorelinux.org> | 2021-06-15 14:57:03 +0100 |
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committer | V3n3RiX <venerix@redcorelinux.org> | 2021-06-15 14:57:03 +0100 |
commit | d18bf1e01b65ee4bf0c804e2843b282d3d4e5d7c (patch) | |
tree | 4a95cbc6ffdf13bad6ecbc7f8d5af99631984123 /sci-chemistry/theseus/theseus-3.3.0.ebuild | |
parent | e748ba9741f6540f4675c23e3e37b73e822c13a4 (diff) |
gentoo resync : 15.06.2021
Diffstat (limited to 'sci-chemistry/theseus/theseus-3.3.0.ebuild')
-rw-r--r-- | sci-chemistry/theseus/theseus-3.3.0.ebuild | 69 |
1 files changed, 0 insertions, 69 deletions
diff --git a/sci-chemistry/theseus/theseus-3.3.0.ebuild b/sci-chemistry/theseus/theseus-3.3.0.ebuild deleted file mode 100644 index dd9c0b802edc..000000000000 --- a/sci-chemistry/theseus/theseus-3.3.0.ebuild +++ /dev/null @@ -1,69 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit multilib toolchain-funcs - -DESCRIPTION="Maximum likelihood superpositioning and analysis of macromolecular structures" -HOMEPAGE="http://www.theseus3d.org/" -SRC_URI="http://www.theseus3d.org/src/${PN}_${PV}.tar.gz" - -SLOT="0" -LICENSE="GPL-3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -RDEPEND=" - sci-libs/gsl - || ( - sci-biology/muscle - sci-biology/probcons - sci-biology/mafft - sci-biology/t-coffee - sci-biology/kalign - sci-biology/clustalw:2 - )" -DEPEND="${RDEPEND} - virtual/pkgconfig" - -S="${WORKDIR}"/${PN}_src/ - -src_prepare() { - cat >> make.inc <<- EOF - ARCH = $(tc-getAR) - ARCHFLAGS = -rvs - RANLIB = $(tc-getRANLIB) - LOCALLIBDIR = "${EPREFIX}/usr/$(get_libdir) - SYSLIBS = $($(tc-getPKG_CONFIG) --libs gsl) -lpthread - LIBS = -ldistfit -lmsa -ldssplite -ldltmath -lDLTutils -ltheseus - LIBDIR = -L./lib - INSTALLDIR = "${ED}"/usr/bin - OPT = - WARN = - CFLAGS = ${CFLAGS} -std=c11 \$(WARN) - CC = $(tc-getCC) - EOF - - sed \ - -e 's|theseus:|theseus: libs|g' \ - -e '/-o theseus/s:$(CC):$(CC) ${LDFLAGS}:g' \ - -i Makefile || die - - sed \ - -e 's:/usr/bin/sed:sed:g' \ - -e "s:/usr/local/bin/:/usr/bin/:g" \ - -e "s:/usr/bin/:${EPREFIX}/usr/bin/:g" \ - -i theseus_align || die -} - -src_compile() { - emake ltheseus - default -} - -src_install() { - dobin theseus theseus_align - dodoc theseus_man.pdf README AUTHORS - use examples && insinto /usr/share/${PN} && doins -r examples -} |