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authorV3n3RiX <venerix@redcorelinux.org>2017-10-09 18:53:29 +0100
committerV3n3RiX <venerix@redcorelinux.org>2017-10-09 18:53:29 +0100
commit4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch)
treeba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-chemistry/openbabel-perl
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-chemistry/openbabel-perl')
-rw-r--r--sci-chemistry/openbabel-perl/Manifest10
-rw-r--r--sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch108
-rw-r--r--sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-gcc-6_and_7-backport.patch13
-rw-r--r--sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch41
-rw-r--r--sci-chemistry/openbabel-perl/metadata.xml18
-rw-r--r--sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild72
-rw-r--r--sci-chemistry/openbabel-perl/openbabel-perl-2.4.1.ebuild70
7 files changed, 332 insertions, 0 deletions
diff --git a/sci-chemistry/openbabel-perl/Manifest b/sci-chemistry/openbabel-perl/Manifest
new file mode 100644
index 000000000000..430fc44ecbdd
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/Manifest
@@ -0,0 +1,10 @@
+AUX openbabel-perl-2.3.2-bindings_only.patch 4557 SHA256 5ccb04d28bcbaf190275581fb66729b6a06c59b2e4a10e288bd90251f06f66a5 SHA512 475600513f188f2e3dee711ab2073954511b7d71c0af222dc9fe121bcbd4821d0ab32934d5035452ad4820d0dd750899995696c20504769b25cad7ef2d27aa5e WHIRLPOOL c573a123b43c67324b04a1283b2b567ed589f619dc2a22c1f4937edab82a2da40d74f56e52cb2d9418477c7713fd1f450dfd2f6b4563f745717a5a417a67975b
+AUX openbabel-perl-2.3.2-gcc-6_and_7-backport.patch 635 SHA256 49f9fc47d1c864d501a266c4d1d7251d5921ce64f1de33a7679d369938bd8490 SHA512 e1b4402f34d01ced5b4caaa184b4e5544cf47893cfe7958054052b05a57dc34b4d44239a212c7d909f29b9366b83b6df74993f844a20f23748c01272ec093081 WHIRLPOOL 8789037e71722ee28d8769eadc574edf2d7d80e8e01f6a8475b18fd4ed0314757bd02854eacf375f7c23ca20b9ec8cc9a40797b51ad3fe64921440549a49cd3d
+AUX openbabel-perl-2.3.2-trunk_cmake.patch 2335 SHA256 20692e07e436c610b0d18f6a28ebaef342b43053b3b1dd57cc23b0c87fe5dedf SHA512 9f42cb3c8aff7eb765790fd3a7f259d8076ebce11f3c2e324a9568a94d948583455db90a8714cdcbd6b6a74087167ada9ec19261862233823d0792bc79302f30 WHIRLPOOL 766f7f1eec840021cc7fe29e94a45a839966bb4726578c72d341dcb9047bb71eec50df72de1072888d158b4ff69b7ee2c8c88a97e1569fb4f4024c8de3d26213
+DIST openbabel-2.3.2.tar.gz 20509105 SHA256 4eaca26679aa6cc85ebf96af19191472ac63ca442c36b0427b369c3a25705188 SHA512 d0e1f8b758ffdd65ec6c31d988bffe3279355e286ce69fad12c5905b3b832e2b73ee95b1061b1576aba1ee9fe4da5e31ec30350c473be17493c657dc80caf919 WHIRLPOOL 74eff18b73d24c8f702e5573a58ba6afba8402e9ce8782de95dc0568575a7d2d632dbc8e8a98b3cd25efdfa7379494f7dcd449342c81ddf73f42a387bce77aaa
+DIST openbabel-2.4.1.tar.gz 11618304 SHA256 204136582cdfe51d792000b20202de8950218d617fd9c6e18cee36706a376dfc SHA512 427e678f0a911bd27b9a8a05e60b6e09f113be4e5dd180daaf80c28d06368e52b57501261755ab3817a8d31f2754db24471fd0ceee706d029386d6f70800e9c6 WHIRLPOOL 88e333b47118449e1edba2b164af77ac7fac9c60e2965b5d6657ba8cf981845f49f6bac9427515ebbdf62668fddf38ae2422c4e107b98df46922c5bba860b216
+EBUILD openbabel-perl-2.3.2.ebuild 1637 SHA256 e17a865b1f898e8df9b5257072b17218b3bd5652fdfa06e17e861e2669b72070 SHA512 1e6337cf0e5838b85250b8ffd2c1492591a88c4ba975084092065d379a76b356bf558b1b546bc294b486a9b4475f19ebcc2c4a23695c823946476090c16bf8a1 WHIRLPOOL 450d0348bcd1a8a0af335d5c457d20f6728ac55c0bce81d16e2721fea8f4aa34bcafbc6517d7bd46dea7273f4aa73b6e24d3c83d2bb0b96eaa299d0c4a753ab7
+EBUILD openbabel-perl-2.4.1.ebuild 1567 SHA256 ab3943a279de596ef26ecf2e8b84486cb418e7a53daca8e7b5b5889b3cf2740d SHA512 46b6bb68dea80fc17625850ca66f4e90af334099f6d724ea28def4950ff400653212476d79d52d9e8b037f611bca751793695ffa530289ec68384139c98ca72d WHIRLPOOL 09c0cbc8f55c7bae87282f5b2be2506ebaca172a6cb0689f372a621496fb40871df7b9e2939f15b628022aa1ddc87a5cc3f05a618a1aaecfee896dbba91957ad
+MISC ChangeLog 2902 SHA256 0623acf0c451c7a2d370588dbd9bf47b1f855bf1f65b0880e83e3d32081fdba5 SHA512 e595628bce359fd2a109f3b9f67fcf01e6bdef9369eb9842678fbe1c9393185d0cf81cda78645c4fb0acbe0e82d377ff1db8ef8ddb294101d027f9f22d8760a8 WHIRLPOOL b7247336838319b4b80ede05e03c268f54e76812245f3b4dd66135e0da7b4e46426ca4f5df4c0cc7e698bbddfa8366a9f7a57bca63bd20002ead12f0bbddc480
+MISC ChangeLog-2015 2484 SHA256 e3be062bded30d8606a8fc3a1177b635885a53ec93a89069e520787d03075a74 SHA512 f06d9c71a1221e54151d9139487b76a6aee21e28fcff852cd2137595973bb335e76c3e21269fc9ae832f18acffd99c8a2a47ad92487c6b613fdd3793a25f6ecd WHIRLPOOL e4586a3b3fda10ddac9d5e743a593c8b929a85846e0182c2593e17f9be9a9a10d08c655d7741f974da55f1cd7c7a908f890a1f4249cfc88599de5205f2e4394f
+MISC metadata.xml 735 SHA256 ac781461bfe74b655f72b911700b3e3281c836b5dce045c774d94688cb49cea6 SHA512 62052b0e677a52adba98961185e5b83525c652e260ebad1b820ed19b071a1f6476cca550ec0c570a5faf0cbad7189cadb78ac8d6de077fbf15e346b7c66e4cf7 WHIRLPOOL 05a0c16c873dea1dd9a39c013a195da0a1adc4886e67ab9628dceddef0ebf86183d404bba4042286be6b9f55988c4fce7d15f85b71baf391e8f49087e8eaac96
diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch
new file mode 100644
index 000000000000..92e126a77d86
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-bindings_only.patch
@@ -0,0 +1,108 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 449f4b4..1c9ad00 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -252,7 +252,8 @@ if(NOT MSVC)
+ }
+ " SCANDIR_NEEDS_CONST)
+
+- set(OB_MODULE_PATH "${CMAKE_INSTALL_PREFIX}/${OB_PLUGIN_INSTALL_DIR}")
++ set(OB_MODULE_PATH "${CMAKE_INSTALL_PREFIX}/${OB_PLUGIN_INSTALL_DIR}"
++ CACHE PATH "Set to system install for bindings only build")
+ add_definitions(-DOB_MODULE_PATH="\\"${OB_MODULE_PATH}\\"")
+
+ # Add some visibility support when using GCC
+@@ -380,7 +381,8 @@ if(UNIX AND BUILD_SHARED)
+ if(APPLE)
+ set(CMAKE_INSTALL_NAME_DIR ${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR})
+ else()
+- set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}")
++ set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}"
++ CACHE PATH "Set sane rpath")
+ set(CMAKE_SKIP_BUILD_RPATH FALSE)
+ set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
+ set(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
+@@ -477,6 +479,13 @@ endif()
+ # Should the language bindings be regenereted?
+ option(RUN_SWIG "Generate language bindings with SWIG" OFF)
+
++# Build bindings only
++option(BINDINGS_ONLY "Build bindings only" OFF)
++
++# Point to library if building bindings only
++set(BABEL_SYSTEM_LIBRARY ${BABEL_LIBRARY}
++ CACHE PATH "Point to openbabel library if building bindings only")
++
+ # Should all bindings be built?
+ option(ALL_BINDINGS "Build all languages bindings" OFF)
+
+diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt
+index 16e9000..8f92e91 100644
+--- a/scripts/CMakeLists.txt
++++ b/scripts/CMakeLists.txt
+@@ -92,16 +92,30 @@ if (DO_PYTHON_BINDINGS)
+ endif(RUN_SWIG)
+
+ add_library(bindings_python MODULE ${openbabel_SOURCE_DIR}/scripts/python/openbabel-python.cpp)
+- target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_LIBRARY})
++ if(BINDINGS_ONLY)
++ target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_SYSTEM_LIBRARY})
++ else()
++ target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_LIBRARY})
++ endif()
++
+ if(NOT WIN32)
+ set_target_properties(bindings_python PROPERTIES
+ OUTPUT_NAME _openbabel
+ PREFIX ""
+ SUFFIX .so )
+- add_dependencies(bindings_python openbabel)
+- install(TARGETS bindings_python LIBRARY DESTINATION ${LIB_INSTALL_DIR})
+- install(FILES ${openbabel_SOURCE_DIR}/scripts/python/openbabel.py DESTINATION ${LIB_INSTALL_DIR})
+- install(FILES ${openbabel_SOURCE_DIR}/scripts/python/pybel.py DESTINATION ${LIB_INSTALL_DIR})
++ if(NOT BINDINGS_ONLY)
++ add_dependencies(bindings_python openbabel)
++ endif()
++
++ install(TARGETS bindings_python
++ LIBRARY DESTINATION ${LIB_INSTALL_DIR}
++ COMPONENT bindings_python)
++ install(FILES ${openbabel_SOURCE_DIR}/scripts/python/openbabel.py
++ DESTINATION ${LIB_INSTALL_DIR}
++ COMPONENT bindings_python)
++ install(FILES ${openbabel_SOURCE_DIR}/scripts/python/pybel.py
++ DESTINATION ${LIB_INSTALL_DIR}
++ COMPONENT bindings_python)
+ else(NOT WIN32)
+ set_target_properties(bindings_python PROPERTIES
+ OUTPUT_NAME _openbabel
+@@ -231,13 +245,25 @@ if (DO_PERL_BINDINGS)
+ endif (RUN_SWIG)
+
+ add_library(bindings_perl MODULE ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp)
+- target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_LIBRARY} ${PERL_EXTRA_LINK_FLAGS})
++ if(BINDINGS_ONLY)
++ target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_SYSTEM_LIBRARY} ${PERL_EXTRA_LINK_FLAGS})
++ else()
++ target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_LIBRARY} ${PERL_EXTRA_LINK_FLAGS})
++ endif()
++
+ set_target_properties(bindings_perl PROPERTIES
+ PREFIX ""
+ OUTPUT_NAME OpenBabel)
+- add_dependencies(bindings_perl openbabel)
+- install(TARGETS bindings_perl LIBRARY DESTINATION ${LIB_INSTALL_DIR})
+- install(FILES ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm DESTINATION ${LIB_INSTALL_DIR})
++ if(NOT BINDINGS_ONLY)
++ add_dependencies(bindings_perl openbabel)
++ endif()
++
++ install(TARGETS bindings_perl
++ LIBRARY DESTINATION ${LIB_INSTALL_DIR}/auto/Chemistry/OpenBabel/
++ COMPONENT bindings_perl)
++ install(FILES ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm
++ DESTINATION ${LIB_INSTALL_DIR}/Chemistry/
++ COMPONENT bindings_perl)
+
+ endif (DO_PERL_BINDINGS)
+
diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-gcc-6_and_7-backport.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-gcc-6_and_7-backport.patch
new file mode 100644
index 000000000000..e23dc6020ee5
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-gcc-6_and_7-backport.patch
@@ -0,0 +1,13 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 0ee545cf..7f4b944e 100755
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -239,7 +239,7 @@ check_type_size(clock_t CLOCK_T)
+ # Get the GCC version - from KDE4 cmake files
+ if(CMAKE_COMPILER_IS_GNUCXX)
+ exec_program(${CMAKE_C_COMPILER} ARGS --version OUTPUT_VARIABLE _gcc_version_info)
+- string(REGEX MATCH "[345]\\.[0-9]\\.[0-9]" _gcc_version "${_gcc_version_info}")
++ string(REGEX MATCH "[34567]\\.[0-9]\\.[0-9]" _gcc_version "${_gcc_version_info}")
+ # gcc on mac just reports: "gcc (GCC) 3.3 20030304 ..." without the
+ # patch level, handle this here:
+ if (NOT _gcc_version)
diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch
new file mode 100644
index 000000000000..b72a622a3afb
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.2-trunk_cmake.patch
@@ -0,0 +1,41 @@
+diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt
+index e7298ce..16e9000 100644
+--- a/scripts/CMakeLists.txt
++++ b/scripts/CMakeLists.txt
+@@ -231,36 +239,6 @@ if (DO_PERL_BINDINGS)
+ install(TARGETS bindings_perl LIBRARY DESTINATION ${LIB_INSTALL_DIR})
+ install(FILES ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm DESTINATION ${LIB_INSTALL_DIR})
+
+- set(PERL_INSTALLDIRS_TEXT "")
+- if (OBPERL_INSTALLDIRS)
+- set(PERL_INSTALLDIRS_TEXT "INSTALLDIRS=${OBPERL_INSTALLDIRS}")
+- endif (OBPERL_INSTALLDIRS)
+-
+- if (NOT MSVC)
+- add_custom_target(pre_bindings_perl ALL
+- # Create the scripts/perl directory; we cannot do this inside
+- # bindings_perl as the WORKING_DIRECTORY needs to already exist!
+- COMMAND ${CMAKE_COMMAND} -E make_directory ${openbabel_BINARY_DIR}/scripts/perl
+- )
+- add_custom_target(bindings_perl ALL
+- COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/Makefile.PL ${openbabel_BINARY_DIR}/scripts/perl
+- COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm ${openbabel_BINARY_DIR}/scripts/perl
+- COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp ${openbabel_BINARY_DIR}/scripts/perl
+- COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc SRC_DIR=${openbabel_SOURCE_DIR} OBJ_DIR=${openbabel_BINARY_DIR} ${PERL_EXECUTABLE} ${openbabel_BINARY_DIR}/scripts/perl/Makefile.PL ${PERL_PREFIX_TEXT} ${PERL_INSTALLDIRS_TEXT}
+- COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc make
+- DEPENDS openbabel ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp
+- WORKING_DIRECTORY ${openbabel_BINARY_DIR}/scripts/perl
+- )
+- add_dependencies(bindings_perl pre_bindings_perl openbabel)
+- install(CODE "execute_process(COMMAND make install DESTDIR=\$ENV{DESTDIR} WORKING_DIRECTORY ${openbabel_BINARY_DIR}/scripts/perl)")
+-
+- else (NOT MSVC)
+- add_library(bindings_perl MODULE ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp)
+- target_link_libraries(bindings_perl ${PERL_LIBRARY} ${BABEL_LIBRARY})
+- set_target_properties(bindings_perl PROPERTIES
+- OUTPUT_NAME openbabel_perl )
+- endif(NOT MSVC)
+-
+ endif (DO_PERL_BINDINGS)
+
+ ###################
diff --git a/sci-chemistry/openbabel-perl/metadata.xml b/sci-chemistry/openbabel-perl/metadata.xml
new file mode 100644
index 000000000000..e549fb694ab7
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/metadata.xml
@@ -0,0 +1,18 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="project">
+ <email>sci-chemistry@gentoo.org</email>
+ <name>Gentoo Chemistry Project</name>
+ </maintainer>
+ <longdescription>
+OpenBabel is a chemical toolbox designed to speak the many languages of
+chemical data. It's an open, collaborative project allowing anyone to
+search, convert, analyze, or store data from molecular modeling, chemistry,
+solid-state materials, biochemistry, or related areas.
+This package enables to access OpenBabel library from Perl programs.
+</longdescription>
+ <upstream>
+ <remote-id type="sourceforge">openbabel</remote-id>
+ </upstream>
+</pkgmetadata>
diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild
new file mode 100644
index 000000000000..1f6b5d8005a2
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/openbabel-perl-2.3.2.ebuild
@@ -0,0 +1,72 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=5
+
+inherit cmake-utils eutils perl-module
+
+DESCRIPTION="Perl bindings for OpenBabel"
+HOMEPAGE="http://openbabel.sourceforge.net/"
+SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
+
+KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
+SLOT="0"
+LICENSE="GPL-2"
+IUSE=""
+
+RDEPEND="
+ dev-lang/perl:=
+ ~sci-chemistry/openbabel-${PV}"
+DEPEND="${RDEPEND}
+ >=dev-util/cmake-2.4.8
+ >=dev-lang/swig-2"
+
+S="${WORKDIR}/openbabel-${PV}"
+
+PATCHES=(
+ "${FILESDIR}"/${P}-trunk_cmake.patch
+ "${FILESDIR}"/${P}-bindings_only.patch
+ "${FILESDIR}"/${P}-gcc-6_and_7-backport.patch
+)
+
+src_prepare() {
+ sed \
+ -e '/__GNUC__/s:== 4:>= 4:g' \
+ -i include/openbabel/shared_ptr.h || die
+ epatch "${PATCHES[@]}"
+ perl_set_version
+}
+
+src_configure() {
+ local mycmakeargs=(
+ -DCMAKE_INSTALL_RPATH=
+ -DBINDINGS_ONLY=ON
+ -DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so"
+ -DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}"
+ -DLIB_INSTALL_DIR="${D}/${VENDOR_ARCH}"
+ -DPERL_BINDINGS=ON
+ -DRUN_SWIG=ON
+ )
+
+ cmake-utils_src_configure
+}
+
+src_compile() {
+ cmake-utils_src_compile bindings_perl
+}
+
+src_test() {
+ mkdir "${CMAKE_BUILD_DIR}/$(get_libdir)/Chemistry"
+ cp \
+ "${CMAKE_USE_DIR}/scripts/perl/OpenBabel.pm" \
+ "${CMAKE_BUILD_DIR}/$(get_libdir)/Chemistry/"
+ for i in "${CMAKE_USE_DIR}"/scripts/perl/t/*; do
+ einfo "Running test: ${i}"
+ perl -I"${CMAKE_BUILD_DIR}/$(get_libdir)" "${i}" || die
+ done
+}
+
+src_install() {
+ cd "${CMAKE_BUILD_DIR}"
+ cmake -DCOMPONENT=bindings_perl -P cmake_install.cmake
+}
diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.4.1.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.4.1.ebuild
new file mode 100644
index 000000000000..1e01e9007b7b
--- /dev/null
+++ b/sci-chemistry/openbabel-perl/openbabel-perl-2.4.1.ebuild
@@ -0,0 +1,70 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+inherit cmake-utils perl-module
+
+DESCRIPTION="Perl bindings for OpenBabel"
+HOMEPAGE="http://openbabel.sourceforge.net/"
+SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
+
+KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
+SLOT="0/5"
+LICENSE="GPL-2"
+IUSE=""
+
+RDEPEND="
+ dev-lang/perl:=
+ ~sci-chemistry/openbabel-${PV}"
+DEPEND="${RDEPEND}
+ >=dev-util/cmake-2.4.8
+ >=dev-lang/swig-2"
+
+S="${WORKDIR}/openbabel-${PV}"
+
+PATCHES=(
+ "${FILESDIR}"/${PN}-2.3.2-gcc-6_and_7-backport.patch
+)
+
+src_prepare() {
+ sed \
+ -e '/__GNUC__/s:== 4:>= 4:g' \
+ -i include/openbabel/shared_ptr.h || die
+ default
+ perl_set_version
+}
+
+src_configure() {
+ local mycmakeargs=(
+ -DCMAKE_INSTALL_RPATH=
+ -DBINDINGS_ONLY=ON
+ -DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so"
+ -DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}"
+ -DLIB_INSTALL_DIR="${D}/${VENDOR_ARCH}"
+ -DPERL_BINDINGS=ON
+ -DRUN_SWIG=ON
+ )
+
+ cmake-utils_src_configure
+}
+
+src_compile() {
+ cmake-utils_src_compile bindings_perl
+}
+
+src_test() {
+ mkdir "${CMAKE_BUILD_DIR}/$(get_libdir)/Chemistry" || die
+ cp \
+ "${CMAKE_USE_DIR}/scripts/perl/OpenBabel.pm" \
+ "${CMAKE_BUILD_DIR}/$(get_libdir)/Chemistry/" || die
+ for i in "${CMAKE_USE_DIR}"/scripts/perl/t/*; do
+ einfo "Running test: ${i}"
+ perl -I"${CMAKE_BUILD_DIR}/$(get_libdir)" "${i}" || die
+ done
+}
+
+src_install() {
+ cd "${CMAKE_BUILD_DIR}" || die
+ cmake -DCOMPONENT=bindings_perl -P cmake_install.cmake
+}