diff options
| author | V3n3RiX <venerix@koprulu.sector> | 2022-11-21 01:03:25 +0000 |
|---|---|---|
| committer | V3n3RiX <venerix@koprulu.sector> | 2022-11-21 01:03:25 +0000 |
| commit | d32022e7301aef2b3f52f6b7a3de81c6e03ffcaf (patch) | |
| tree | 4e64fbab713348c061644255d893ff91f2d8b1e5 /sci-biology | |
| parent | 92f98ae772a60a2fa63efbda2f915da957a3b3b8 (diff) | |
gentoo auto-resync : 21:11:2022 - 01:03:25
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/Manifest.gz | bin | 20005 -> 20002 bytes | |||
| -rw-r--r-- | sci-biology/hmmer/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/hmmer/hmmer-2.3.2-r5.ebuild | 5 |
3 files changed, 5 insertions, 2 deletions
diff --git a/sci-biology/Manifest.gz b/sci-biology/Manifest.gz Binary files differindex 797289a75e5b..744adfe22363 100644 --- a/sci-biology/Manifest.gz +++ b/sci-biology/Manifest.gz diff --git a/sci-biology/hmmer/Manifest b/sci-biology/hmmer/Manifest index 3e02058f5767..79c67879328d 100644 --- a/sci-biology/hmmer/Manifest +++ b/sci-biology/hmmer/Manifest @@ -4,6 +4,6 @@ AUX hmmer-3.1_beta2-fix-perl-shebangs.patch 8605 BLAKE2B c0c78fed780b43df960dc24 AUX hmmer-3.1_beta2-makefile.patch 3679 BLAKE2B e258b23bda9d0515891f1d571b94f9ef48499f25ce6cb52c3d1bcd0a28bc527f335cb25ece944afb33e4824438315cc9986243fb13e07eb128d7859e0a77f4b1 SHA512 bebd36deee48d4a043a1d84233ccbc93de8e44b5f7f57bf24a551b53a6f3dbfb3166861555755744d0abb4fce871d7c19fa8887c08115b7d8f61ca5ad38c3cc6 DIST hmmer-2.3.2.tar.gz 1024933 BLAKE2B 34fdc7b24b28d653022c80a63b2fd8376c15c961e1550a04cb310943d165575a2721cc5e4cb516335f57414f8621b7e62c4e30ee1f107bb714e40c59ed37d418 SHA512 5abf9c304de38b183a5beab7a5cfc75c3774ff6e161b7b8e55a0eae9fd156dbb7ed95d216c16d3c585c494bb69e3a9fdfabfb5dc729b7050a4d1be95c74df7d7 DIST hmmer-3.1b2.tar.gz 5965253 BLAKE2B 38d1d6fb43aa814c0e3ddc551469ebd6b967f181c45df3802598f31abef10998595218167555a8862c0d2caa9118d9a7f1c22b673b6d596665f797ba903093f5 SHA512 64c8a840cb62160a1c13a20e64f42d297edb7969425d5047eefd8ee9f992d66612d62843523e8f33a2c38568ce1b0a9df23dd1d3ecf6773007f6db12d4cc4771 -EBUILD hmmer-2.3.2-r5.ebuild 1736 BLAKE2B 9ab5016f9a29c9d2dc22ed0456a064f14ea91c22d7a226aeeec02ad2c6766effb4a9933487aed37b335a113ab012829eb8aa583770e2ff01e934347445060a90 SHA512 18eb7ecb918ce4786ee1556fc641d1ca89c9255aa6009ea8b5d524752bad5046eeb50de9b0d5637b4c59cec624879d0c0f07698f5fe370aed7a25610aa377cca +EBUILD hmmer-2.3.2-r5.ebuild 1843 BLAKE2B ecea0f3370698641b3ddc5c572f9386bacc2547fab72889d79fd910052edd14bd4a2447b8a9183290a5c0be4f313735bbab8e1bd67d1c4275a6d036fe2fae3dc SHA512 3109f304c6f48b7d924eeadd416fa3e9c3e662f2380b4ce1da283d80a47de9fda4585966e8f29c47dd89914e7e03bf0f9966f828d45a13befb0f035e89cb2978 EBUILD hmmer-3.1_beta2-r1.ebuild 1140 BLAKE2B a5a0a26f2461edc08101505fa600383952501083111e828b4a0484a2c895acb63b3784247ea3a9b4fb10a13089a84f09f9721b4835cbb7b5479f0877e62c84aa SHA512 65889b5afe47d60abdd7ebb4d098510e8f25979e442df2a88d6327ab2fffc6d056fa6f96f32c0d37614473bc961c1e60fc3e194e535c5b6816b3c420816c5ea9 MISC metadata.xml 262 BLAKE2B adaacf2ac22ce09f8b1b68f538773c1e2101156181ff302eca2ce1280ee5d45db4eb302a8eee1bbead5e55942443dd16ef924cfbfdc95a1658dc6a9f460468a2 SHA512 ac924b6b530d96645f173d40f7a2bf0e3abbf49048ebf7fadcea3dd553cd25504f0e68a103395de1fb59a2e5e11497dcead601be01cc6f0295ccbc4155f67e3f diff --git a/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild b/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild index b9f77b9dfce8..b305820faff3 100644 --- a/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild +++ b/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild @@ -3,7 +3,7 @@ EAPI=8 -inherit toolchain-funcs +inherit flag-o-matic toolchain-funcs DESCRIPTION="Sequence analysis using profile hidden Markov models" HOMEPAGE="http://hmmer.org/" @@ -23,6 +23,9 @@ PATCHES=( ) src_configure() { + # required to expose pthread_setconcurrency(), #882279 + append-cppflags -D_XOPEN_SOURCE=500 + # prevent stray environmental variable # from causing issues in the test phase unset TMPDIR |