diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-biology/unafold | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-biology/unafold')
| -rw-r--r-- | sci-biology/unafold/Manifest | 5 | ||||
| -rw-r--r-- | sci-biology/unafold/metadata.xml | 8 | ||||
| -rw-r--r-- | sci-biology/unafold/unafold-3.8-r1.ebuild | 27 |
3 files changed, 40 insertions, 0 deletions
diff --git a/sci-biology/unafold/Manifest b/sci-biology/unafold/Manifest new file mode 100644 index 000000000000..ff0522bee054 --- /dev/null +++ b/sci-biology/unafold/Manifest @@ -0,0 +1,5 @@ +DIST unafold-3.8.tar.bz2 282418 SHA256 7552724ce82ad8618167ec0524d8c931ac4383314669322c8424cafc06c2bf38 SHA512 4c83cf0122e4d4ec2b713833adb11eb608b0f880f5b68114aefd8c7fa980c8d02f9a6cfc0c88cd640b4457e65954b05189118e8ac5ed207b2f9910738ca71a6c WHIRLPOOL 9fd5744e66d8669817433b5427fc671ac5185760ffaf0682a7938fc5542f24cbe7b08f7722c7135cd3197af2d748740e0ca35a70a5f6c40a4a5d5aaa806ed923 +EBUILD unafold-3.8-r1.ebuild 589 SHA256 a0483fe9069ef4cde39ee2669da9f611996b4e3b6feeb0cec99529089c53b9e3 SHA512 4b025f8e4b52ef5e833d299973d44e5846000c45b7f36f200dc14414cb1367188f228e8fba23782f19475a38eb6f6d1cf8ca053b5d70f8b573aee69da7fc71b9 WHIRLPOOL ca9b77fa995b1fbdff8fa0db79db45b01690f7acc0e2e95885c0964b495da70f2cfadfcc6c352a55aed4134f601d167c664300ca0950f2eaf3818dc7422aa4ba +MISC ChangeLog 2480 SHA256 b82760c0782b0cf2d63fa7262ebc67acfebc94bafdf670ae0c3efa8a317f8d3d SHA512 52f440da912fd1ede230984fa5748085e20bebbf2e484e7f28b165e2ed7f4ea28895e557d1122e844ba3da7d9b754c29e4f334b8f6b1698b18090163dd4da194 WHIRLPOOL 920c020275a5767432eacbe749a6dda767944ea0ac896270ac7c0f0a207f800e5aef2ac131487b113d9f94ed9dc70005660226104af5de14e4fba92c9b397794 +MISC ChangeLog-2015 677 SHA256 affcd65b3c6d414a960ec6c4f7052f189add7c83da5f91623383cf15b3f8e607 SHA512 f0c77df86c9f95155c0fd724b0350a217d5dcf6c83aa7c0d273c39026ad321b7c57d018e7c33891482885c5d6d5d934a45063d542c29ef05c3a70762f20b432a WHIRLPOOL 0f2ea0014e9f678cb1c57e561c281f28be38504979b0b57b662e2bc3f24aeeb623dda839092b3d5ead9f72116850871a6947950526bda44cea79127b9c9fa241 +MISC metadata.xml 267 SHA256 b3535fccca0fc8511c1245214c1a7c105447b35f21093bda132991874ce82d48 SHA512 91ab266d9ab24401bc0fec759c5b6cfcf44a3c5669fc31c7301d79770839bb5dfa0e155d949392ef06176b4a0b2c32b91b1b54b0027f972db61f0a5e54644403 WHIRLPOOL d841a2f928c50434f2e8c65f583ea3aa2d04e5cebd664b1531ab5373260f735219131991000bbb2b21aa3add05dcdce29548b78eac8d8c0eced6dc5505b64e13 diff --git a/sci-biology/unafold/metadata.xml b/sci-biology/unafold/metadata.xml new file mode 100644 index 000000000000..959160fe46b1 --- /dev/null +++ b/sci-biology/unafold/metadata.xml @@ -0,0 +1,8 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/unafold/unafold-3.8-r1.ebuild b/sci-biology/unafold/unafold-3.8-r1.ebuild new file mode 100644 index 000000000000..e4fff4e8cabd --- /dev/null +++ b/sci-biology/unafold/unafold-3.8-r1.ebuild @@ -0,0 +1,27 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +inherit flag-o-matic + +DESCRIPTION="Unified Nucleic Acid Folding and hybridization package" +HOMEPAGE="http://mfold.rna.albany.edu/" +SRC_URI="http://dinamelt.bioinfo.rpi.edu/download/${P}.tar.bz2" + +LICENSE="unafold" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="custom-cflags" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_prepare() { + # recommended in README + use custom-cflags || append-flags -O3 + + sed \ + -e 's:hybrid (UNAFold) 3.7:hybrid (UNAFold) 3.8:g' \ + -i tests/hybrid.tml || die +} |