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| author | V3n3RiX <venerix@koprulu.sector> | 2022-03-20 00:40:44 +0000 |
|---|---|---|
| committer | V3n3RiX <venerix@koprulu.sector> | 2022-03-20 00:40:44 +0000 |
| commit | 4cbcc855382a06088e2f016f62cafdbcb7e40665 (patch) | |
| tree | 356496503d52354aa6d9f2d36126302fed5f3a73 /sci-biology/repeatmasker/repeatmasker-4.0.1.ebuild | |
| parent | fcc5224904648a8e6eb528d7603154160a20022f (diff) | |
gentoo resync : 20.03.2022
Diffstat (limited to 'sci-biology/repeatmasker/repeatmasker-4.0.1.ebuild')
| -rw-r--r-- | sci-biology/repeatmasker/repeatmasker-4.0.1.ebuild | 58 |
1 files changed, 0 insertions, 58 deletions
diff --git a/sci-biology/repeatmasker/repeatmasker-4.0.1.ebuild b/sci-biology/repeatmasker/repeatmasker-4.0.1.ebuild deleted file mode 100644 index bf6097df1f68..000000000000 --- a/sci-biology/repeatmasker/repeatmasker-4.0.1.ebuild +++ /dev/null @@ -1,58 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -MY_PV=${PV//\./-} - -DESCRIPTION="Screen DNA sequences for interspersed repeats and low complexity DNA" -HOMEPAGE="http://repeatmasker.org/" -SRC_URI="http://www.repeatmasker.org/RepeatMasker-open-${MY_PV}.tar.gz" - -LICENSE="OSL-2.1" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND=" - sci-biology/rmblast - sci-biology/trf - sci-biology/repeatmasker-libraries" - -S="${WORKDIR}/RepeatMasker" - -src_configure() { - sed -i -e 's/system( "clear" );//' \ - -e 's|> \($rmLocation/Libraries/RepeatMasker.lib\)|> '${D}'/\1|' "${S}/configure" || die - echo " -env -/usr/share/${PN} -/usr/bin -2 -/opt/rmblast/bin -Y -5" | "${S}/configure" || die "configure failed" - sed -i -e 's|use lib $FindBin::RealBin;|use lib "/usr/share/'${PN}'/lib";|' \ - -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/\1"|' \ - -e '/$REPEATMASKER_DIR/ s|$FindBin::RealBin|/usr/share/'${PN}'|' \ - "${S}"/{DateRepeats,ProcessRepeats,RepeatMasker,DupMasker,RepeatProteinMask,RepeatMaskerConfig.pm,Taxonomy.pm} || die -} - -src_install() { - exeinto /usr/share/${PN} - for i in DateRepeats ProcessRepeats RepeatMasker DupMasker RepeatProteinMask; do - doexe $i - dosym /usr/share/${PN}/$i /usr/bin/$i - done - - dodir /usr/share/${PN}/lib - insinto /usr/share/${PN}/lib - doins "${S}"/*.pm - - insinto /usr/share/${PN} - doins -r util Matrices Libraries taxonomy.dat *.help - keepdir /usr/share/${PN}/Libraries - - dodoc README INSTALL *.help -} |