diff options
author | V3n3RiX <venerix@koprulu.sector> | 2024-03-31 02:13:53 +0100 |
---|---|---|
committer | V3n3RiX <venerix@koprulu.sector> | 2024-03-31 02:13:53 +0100 |
commit | 95f4ecedd41206e678e2ddec24f8382ba2287dd1 (patch) | |
tree | cda4312d875acc2990aeb49d104c9451aae1666d /sci-biology/emboss/emboss-6.6.0-r2.ebuild | |
parent | a40f8cd35ca0e91929e52f40825a390bd16a626c (diff) |
gentoo auto-resync : 31:03:2024 - 02:13:53
Diffstat (limited to 'sci-biology/emboss/emboss-6.6.0-r2.ebuild')
-rw-r--r-- | sci-biology/emboss/emboss-6.6.0-r2.ebuild | 71 |
1 files changed, 0 insertions, 71 deletions
diff --git a/sci-biology/emboss/emboss-6.6.0-r2.ebuild b/sci-biology/emboss/emboss-6.6.0-r2.ebuild deleted file mode 100644 index 79d3034a0985..000000000000 --- a/sci-biology/emboss/emboss-6.6.0-r2.ebuild +++ /dev/null @@ -1,71 +0,0 @@ -# Copyright 1999-2024 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit autotools emboss-r3 readme.gentoo-r1 - -DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package" -SRC_URI=" - ftp://emboss.open-bio.org/pub/${PN^^}/${P^^}.tar.gz - https://dev.gentoo.org/~soap/distfiles/${P}-patches-r1.tar.xz" -S="${WORKDIR}/${P^^}" - -LICENSE+=" Apache-2.0 GPL-3+ CC-BY-3.0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="minimal" - -RDEPEND=" - !dev-build/cons - !games-action/xbomber -" -PDEPEND=" - !minimal? ( - sci-biology/aaindex - sci-biology/cutg - sci-biology/primer3 - sci-biology/prints - sci-biology/prosite - sci-biology/rebase - )" - -PATCHES=( - "${WORKDIR}"/patches/${P}-fix-build-system.patch - "${WORKDIR}"/patches/${P}-FORTIFY_SOURCE-fix.patch - "${WORKDIR}"/patches/${P}-plplot-declarations.patch - "${WORKDIR}"/patches/${P}-qa-implicit-declarations.patch - "${WORKDIR}"/patches/${P}-C99-bool.patch - "${WORKDIR}"/patches/${P}-Wimplicit-function-declaration.patch -) - -src_prepare() { - default - eautoreconf -} - -src_install() { - emboss-r3_src_install - - readme.gentoo_create_doc - - # Install env file for setting libplplot and acd files path. - newenvd - 22emboss <<- EOF - # ACD files location - EMBOSS_ACDROOT="${EPREFIX}/usr/share/EMBOSS/acd" - EMBOSS_DATA="${EPREFIX}/usr/share/EMBOSS/data" - EOF - - # Remove useless dummy files - find "${ED}"/usr/share/EMBOSS -name dummyfile -delete \ - || die "Failed to remove dummy files" - - # Move the provided codon files to a different directory. This will avoid - # user confusion and file collisions on case-insensitive file systems (see - # bug #115446). This change is documented in "README.gentoo". - mv "${ED}"/usr/share/EMBOSS/data/CODONS{,.orig} \ - || die "Failed to move CODON directory" -} - -pkg_postinst() { - readme.gentoo_print_elog -} |