diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-biology/bioperl-db/files | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-biology/bioperl-db/files')
| -rw-r--r-- | sci-biology/bioperl-db/files/bioperl-db-1.6.9-db.patch | 45 |
1 files changed, 45 insertions, 0 deletions
diff --git a/sci-biology/bioperl-db/files/bioperl-db-1.6.9-db.patch b/sci-biology/bioperl-db/files/bioperl-db-1.6.9-db.patch new file mode 100644 index 000000000000..36698651c7d1 --- /dev/null +++ b/sci-biology/bioperl-db/files/bioperl-db-1.6.9-db.patch @@ -0,0 +1,45 @@ +From d689a1473977b0aa368590ba1f913521e4f466c7 Mon Sep 17 00:00:00 2001 +From: Kent Fredric <kentfredric@gmail.com> +Date: Tue, 18 Jul 2017 16:02:26 +1200 +Subject: [PATCH] Allow custom host/port configurations + +--- + Build.PL | 4 ++-- + t/DBTestHarness.pm | 4 ++-- + 2 files changed, 4 insertions(+), 4 deletions(-) + +diff --git a/Build.PL b/Build.PL +index ecc402e..a61190f 100755 +--- a/Build.PL ++++ b/Build.PL +@@ -97,9 +97,9 @@ sub biosql_conf { + or die "Error: could not write to config file '$config_file'\n"; + + my %config = (driver => $drivers[0], +- host => '127.0.0.1', ++ host => $ENV{GENTOO_DB_HOSTNAME} || '127.0.0.1', + user => 'root', +- port => 3306, ++ port => $ENV{GENTOO_DB_PORT} || undef, + password => '', + dbname => 'bioseqdb', + database => 'biosql', +diff --git a/t/DBTestHarness.pm b/t/DBTestHarness.pm +index b660429..91e0c54 100755 +--- a/t/DBTestHarness.pm ++++ b/t/DBTestHarness.pm +@@ -47,9 +47,9 @@ my $counter=0; + # Default settings as a hash + my $dflt = { + 'driver' => 'mysql', +- 'host' => 'localhost', ++ 'host' => $ENV{GENTOO_DB_HOST} || 'localhost', + 'user' => 'root', +- 'port' => undef, ++ 'port' => $ENV{GENTOO_DB_PORT} || undef, + 'password' => '', + 'schema_sql' => ['../biosql-schema/sql/biosqldb-mysql.sql'], + 'database' => 'biosql', +-- +2.13.1 + |