gentoo resync : 10.04.2018

8 files changed, 36 insertions, 22 deletions

diff --git a/metadata/md5-cache/sci-libs/Manifest.gz b/metadata/md5-cache/sci-libs/Manifest.gz
index 1429b0b44359..6bd704e64140 100644
--- a/metadata/md5-cache/sci-libs/Manifest.gz
+++ b/metadata/md5-cache/sci-libs/Manifest.gz
diff --git a/metadata/md5-cache/sci-libs/avogadrolibs-0.9.0 b/metadata/md5-cache/sci-libs/avogadrolibs-0.9.0
deleted file mode 100644
index 98c90aff3c89..000000000000
--- a/metadata/md5-cache/sci-libs/avogadrolibs-0.9.0
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-cpp/eigen:3 test? ( dev-cpp/gtest ) sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Advanced molecule editor and visualizer 2 - libraries
-EAPI=6
-HOMEPAGE=http://www.openchemistry.org/
-IUSE=doc hdf5 opengl qt5 static-plugins test vtk
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD GPL-2+
-RDEPEND=>=sci-chemistry/molequeue-0.7 sci-libs/chemkit hdf5? ( sci-libs/hdf5:= ) opengl? ( dev-qt/qtopengl:5 media-libs/glew ) qt5? ( dev-qt/qtconcurrent:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 ) vtk? ( sci-libs/vtk )
-REQUIRED_USE=qt5? ( opengl )
-SLOT=0
-SRC_URI=https://github.com/OpenChemistry/avogadrolibs/archive/0.9.0.tar.gz -> avogadrolibs-0.9.0.tar.gz
-_eclasses_=cmake-utils	d2f8cff68b90b869ef9d460c6f3c4e2e	desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	flag-o-matic	02908f00f002f0f07c5b74783d778325	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	ebb2eaddc6331c4fa000b8eb8f6fe074	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	ce21313503c41896ebcd7d58b0607e37	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=ada0057e624380ec4e2a74db24e75272
diff --git a/metadata/md5-cache/sci-libs/avogadrolibs-1.91.0_pre20180406 b/metadata/md5-cache/sci-libs/avogadrolibs-1.91.0_pre20180406
new file mode 100644
index 000000000000..20a5937b077b
--- /dev/null
+++ b/metadata/md5-cache/sci-libs/avogadrolibs-1.91.0_pre20180406
@@ -0,0 +1,14 @@
+DEFINED_PHASES=compile configure install prepare test unpack
+DEPEND=dev-libs/jsoncpp:= >=sci-chemistry/molequeue-0.7 archive? ( app-arch/libarchive ) hdf5? ( sci-libs/hdf5:= ) qt5? ( dev-qt/qtconcurrent:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 media-libs/glew:0= virtual/opengl ) vtk? ( sci-libs/vtk[qt5] ) dev-cpp/eigen:3 test? ( dev-cpp/gtest ) sys-devel/make >=dev-util/cmake-3.9.6
+DESCRIPTION=Advanced molecule editor and visualizer 2 - libraries
+EAPI=6
+HOMEPAGE=https://www.openchemistry.org/
+IUSE=archive doc hdf5 qt5 static-plugins test vtk
+KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
+LICENSE=BSD GPL-2+
+RDEPEND=dev-libs/jsoncpp:= >=sci-chemistry/molequeue-0.7 archive? ( app-arch/libarchive ) hdf5? ( sci-libs/hdf5:= ) qt5? ( dev-qt/qtconcurrent:5 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 media-libs/glew:0= virtual/opengl ) vtk? ( sci-libs/vtk[qt5] )
+REQUIRED_USE=vtk? ( qt5 )
+SLOT=0
+SRC_URI=https://github.com/OpenChemistry/avogadrolibs/archive/f414794a168712f72884cdcfba818def5f42e721.tar.gz -> avogadrolibs-1.91.0_pre20180406.tar.gz vtk? ( https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern )
+_eclasses_=cmake-utils	d2f8cff68b90b869ef9d460c6f3c4e2e	desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	flag-o-matic	02908f00f002f0f07c5b74783d778325	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	ebb2eaddc6331c4fa000b8eb8f6fe074	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	ce21313503c41896ebcd7d58b0607e37	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
+_md5_=a59e198b145d7a73c0c893627f2a4530
diff --git a/metadata/md5-cache/sci-libs/chemkit-0.1-r2 b/metadata/md5-cache/sci-libs/chemkit-0.1-r2
index 192c86d8360d..b31c65f8760d 100644
--- a/metadata/md5-cache/sci-libs/chemkit-0.1-r2
+++ b/metadata/md5-cache/sci-libs/chemkit-0.1-r2
@@ -2,7 +2,7 @@ DEFINED_PHASES=compile configure install prepare setup test
 DEPEND=dev-cpp/eigen:3 dev-libs/boost:= dev-libs/rapidxml media-libs/glu sci-libs/inchi sci-libs/lemon virtual/opengl examples? ( x11-libs/libX11 x11-libs/libXext ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) sys-devel/make >=dev-util/cmake-3.9.6 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost )
 DESCRIPTION=Library for chemistry applications
 EAPI=6
-HOMEPAGE=http://www.chemkit.org/
+HOMEPAGE=https://github.com/kylelutz/chemkit
 IUSE=examples python test python_targets_python2_7 test
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=BSD PSF-2.2
@@ -12,4 +12,4 @@ RESTRICT=test
 SLOT=0
 SRC_URI=mirror://sourceforge/project/chemkit/chemkit-0.1.tar.gz
 _eclasses_=cmake-utils	d2f8cff68b90b869ef9d460c6f3c4e2e	desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	flag-o-matic	02908f00f002f0f07c5b74783d778325	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	ebb2eaddc6331c4fa000b8eb8f6fe074	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	317a2557b4d7319a7418225f65accf77	python-utils-r1	c9de01becf9df3f8c10aeec3dc693f5d	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	ce21313503c41896ebcd7d58b0607e37	virtualx	3a3c4637ea6d5a2113707a644766337c	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=811a9d22b9cf670fce86c09991851f42
+_md5_=01cb1233fea53bbe4d0d1aade5ff7adc
diff --git a/metadata/md5-cache/sci-libs/libnova-0.15.0 b/metadata/md5-cache/sci-libs/libnova-0.15.0
index 405dd5c542bb..4d6c63c1edf4 100644
--- a/metadata/md5-cache/sci-libs/libnova-0.15.0
+++ b/metadata/md5-cache/sci-libs/libnova-0.15.0
@@ -4,9 +4,9 @@ DESCRIPTION=Celestial Mechanics and Astronomical Calculation Library
 EAPI=5
 HOMEPAGE=http://libnova.sourceforge.net/
 IUSE=doc examples static-libs
-KEYWORDS=amd64 ~hppa ~ppc ~ppc64 x86 ~amd64-linux ~x86-linux
+KEYWORDS=amd64 ~hppa ~ppc ppc64 x86 ~amd64-linux ~x86-linux
 LICENSE=LGPL-2
 SLOT=0
 SRC_URI=mirror://sourceforge/libnova/libnova-0.15.0.tar.gz
 _eclasses_=autotools	4842e626555a9a4344f34cef2e190b67	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	libtool	0081a71a261724730ec4c248494f044d	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=50e0643422e70e556a6416515ec22fc2
+_md5_=0d88e3fb39a3deab3f5d4b7b82d118c9
diff --git a/metadata/md5-cache/sci-libs/orocos_kdl-1.4.0 b/metadata/md5-cache/sci-libs/orocos_kdl-1.4.0
new file mode 100644
index 000000000000..b1418ea1e728
--- /dev/null
+++ b/metadata/md5-cache/sci-libs/orocos_kdl-1.4.0
@@ -0,0 +1,14 @@
+DEFINED_PHASES=compile configure install prepare test
+DEPEND=dev-cpp/eigen:3 test? ( dev-util/cppunit ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6
+DESCRIPTION=Kinematics and Dynamics Library (KDL)
+EAPI=5
+HOMEPAGE=http://www.orocos.org/kdl
+IUSE=doc test examples models
+KEYWORDS=~amd64 ~arm ~x86
+LICENSE=LGPL-2.1
+RDEPEND=dev-cpp/eigen:3
+REQUIRED_USE=examples? ( models )
+SLOT=0/14
+SRC_URI=https://github.com/orocos/orocos_kinematics_dynamics/archive/v1.4.0.tar.gz -> orocos_kinematics_dynamics-1.4.0.tar.gz
+_eclasses_=cmake-utils	d2f8cff68b90b869ef9d460c6f3c4e2e	desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	flag-o-matic	02908f00f002f0f07c5b74783d778325	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	ebb2eaddc6331c4fa000b8eb8f6fe074	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	ce21313503c41896ebcd7d58b0607e37	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
+_md5_=7d8a61ce35b24c50f2ca2ad89345a2eb
diff --git a/metadata/md5-cache/sci-libs/orocos_kdl-9999 b/metadata/md5-cache/sci-libs/orocos_kdl-9999
index 0900ac4813f6..5b0a0113b890 100644
--- a/metadata/md5-cache/sci-libs/orocos_kdl-9999
+++ b/metadata/md5-cache/sci-libs/orocos_kdl-9999
@@ -7,6 +7,6 @@ IUSE=doc test examples models
 LICENSE=LGPL-2.1
 RDEPEND=dev-cpp/eigen:3
 REQUIRED_USE=examples? ( models )
-SLOT=0
+SLOT=0/14
 _eclasses_=cmake-utils	d2f8cff68b90b869ef9d460c6f3c4e2e	desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	flag-o-matic	02908f00f002f0f07c5b74783d778325	git-r3	25b08efef07cea6bcd45b8c6dcce2782	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	ebb2eaddc6331c4fa000b8eb8f6fe074	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	ce21313503c41896ebcd7d58b0607e37	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=50510226efb306edacd211dd5aa8fdb6
+_md5_=7d8a61ce35b24c50f2ca2ad89345a2eb
diff --git a/metadata/md5-cache/sci-libs/szip-2.1-r2 b/metadata/md5-cache/sci-libs/szip-2.1-r2
index 7da8971ab5ca..b0e42ed960d2 100644
--- a/metadata/md5-cache/sci-libs/szip-2.1-r2
+++ b/metadata/md5-cache/sci-libs/szip-2.1-r2
@@ -3,10 +3,10 @@ DESCRIPTION=Extended-Rice lossless compression algorithm implementation
 EAPI=6
 HOMEPAGE=http://www.hdfgroup.org/doc_resource/SZIP/
 IUSE=static-libs
-KEYWORDS=alpha amd64 ~arm ~arm64 ~hppa ia64 ~ppc ~ppc64 sparc x86 ~x86-fbsd ~amd64-linux ~x86-linux
+KEYWORDS=alpha amd64 ~arm ~arm64 ~hppa ia64 ~ppc ppc64 sparc x86 ~x86-fbsd ~amd64-linux ~x86-linux
 LICENSE=szip
 RDEPEND=!sci-libs/libaec[szip]
 SLOT=0/2
 SRC_URI=ftp://ftp.hdfgroup.org/lib-external/szip/2.1/src/szip-2.1.tar.gz
 _eclasses_=desktop	2ccd1dd1dd7bfb8795eea024a4f91bb6	epatch	8233751dc5105a6ae8fcd86ce2bb0247	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	63392afb034aad67f17fa129019eb4d9	ltprune	2770eed66a9b8ef944714cd0e968182e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	885c7d8dd70a58825f3d17e35a3cd1e9	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=d09f2ba773c1cc65563880958f79c90f
+_md5_=655603044533948d66403b7671cdc36f