gentoo resync : 14.07.2018

author: V3n3RiX <venerix@redcorelinux.org> 2018-07-14 21:08:53 +0100
committer: V3n3RiX <venerix@redcorelinux.org> 2018-07-14 21:08:53 +0100
commit: f33a88393b1c8086dea7cb5b5d84f0e3aa891c83 (patch)
tree: 4d9c542a9eafae4e2d389147a63e2d14c93f223f /metadata/md5-cache/sci-chemistry
parent: 8376ef56580626e9c0f796d5b85b53a0a1c7d5f5 (diff)
160 files changed, 0 insertions, 2057 deletions
diff --git a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.3.1 b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.3.1
deleted file mode 100644
index 74d5415d5360..000000000000
--- a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.3.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=>=dev-python/matplotlib-0.91.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/RecSQL-0.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=sci-libs/scipy-0.9[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Python framework for Gromacs
-EAPI=5
-HOMEPAGE=https://orbeckst.github.com/GromacsWrapper/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=dev-python/matplotlib-0.91.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/RecSQL-0.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=sci-libs/scipy-0.9[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/orbeckst/GromacsWrapper/archive/release-0.3.1.tar.gz -> GromacsWrapper-0.3.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	3be1ab44131e8c0bbdaa75823008444b	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=391de03515f3c8a5dd2933589fd4195a
diff --git a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.3.2 b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.3.2
deleted file mode 100644
index cc412568f7e5..000000000000
--- a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.3.2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=>=dev-python/matplotlib-0.91.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/RecSQL-0.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=sci-libs/scipy-0.9[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Python framework for Gromacs
-EAPI=5
-HOMEPAGE=https://orbeckst.github.com/GromacsWrapper/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=dev-python/matplotlib-0.91.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/RecSQL-0.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=sci-libs/scipy-0.9[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/orbeckst/GromacsWrapper/archive/release-0.3.2.tar.gz -> GromacsWrapper-0.3.2.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	3be1ab44131e8c0bbdaa75823008444b	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=33af38381822cf4cbc69c643ed3b6525
diff --git a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.5.1 b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.5.1
deleted file mode 100644
index bbca8a149a23..000000000000
--- a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.5.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=>=dev-python/matplotlib-0.91.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/RecSQL-0.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=sci-libs/scipy-0.9[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Python framework for Gromacs
-EAPI=6
-HOMEPAGE=https://orbeckst.github.com/GromacsWrapper/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=dev-python/matplotlib-0.91.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/RecSQL-0.3[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=sci-libs/scipy-0.9[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/orbeckst/GromacsWrapper/archive/release-0.5.1.tar.gz -> GromacsWrapper-0.5.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	3be1ab44131e8c0bbdaa75823008444b	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=6474bf6d012709e361f4b195d481caef
diff --git a/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0 b/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0
deleted file mode 100644
index a2a036669874..000000000000
--- a/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-biology/biopython[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/GridDataFormats[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/netcdf4-python[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/mmtf-python[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/gsd[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/mock[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/duecredit[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] test? ( dev-python/nose[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-DESCRIPTION=A python library to analyze and manipulate molecular dynamics trajectories
-EAPI=6
-HOMEPAGE=https://www.mdanalysis.org
-IUSE=test python_targets_python2_7 python_targets_python3_5 python_targets_python3_6
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-biology/biopython[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/GridDataFormats[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/netcdf4-python[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/mmtf-python[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/gsd[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/mock[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/duecredit[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
-SLOT=0
-SRC_URI=mirror://pypi/M/MDAnalysis/MDAnalysis-0.18.0.tar.gz
-_eclasses_=distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=18dcf311ec7bbdd23b9c0402adabe534
diff --git a/metadata/md5-cache/sci-chemistry/Manifest.gz b/metadata/md5-cache/sci-chemistry/Manifest.gz
deleted file mode 100644
index da47e4f8ff98..000000000000
--- a/metadata/md5-cache/sci-chemistry/Manifest.gz
+++ /dev/null
diff --git a/metadata/md5-cache/sci-chemistry/ParmEd-2.7.3 b/metadata/md5-cache/sci-chemistry/ParmEd-2.7.3
deleted file mode 100644
index 4bb0e861cd0d..000000000000
--- a/metadata/md5-cache/sci-chemistry/ParmEd-2.7.3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-DESCRIPTION=Parameter/topology editor and molecular simulator
-EAPI=6
-HOMEPAGE=https://parmed.github.io/ParmEd/html/index.html
-IUSE=python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2
-RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
-SLOT=0
-SRC_URI=https://github.com/ParmEd/ParmEd/archive/2.7.3.tar.gz -> ParmEd-2.7.3.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	3be1ab44131e8c0bbdaa75823008444b	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=bd0aae20d1121c134defe3190961693a
diff --git a/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 b/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2
deleted file mode 100644
index f86aef233028..000000000000
--- a/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=virtual/pkgconfig doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-DESCRIPTION=Evaluation of electrostatic properties of nanoscale biomolecular systems
-EAPI=5
-HOMEPAGE=http://www.poissonboltzmann.org/apbs/
-IUSE=debug doc examples fast +fetk iapbs mpi openmp python tools python_targets_python2_7
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=dev-cpp/eigen:3 dev-libs/maloc[mpi=] virtual/blas sys-libs/readline fetk? ( sci-libs/fetk sci-libs/amd sci-libs/umfpack sci-libs/superlu ) mpi? ( virtual/mpi ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-REQUIRED_USE=iapbs? ( fetk ) mpi? ( !python ) python? ( tools fetk iapbs python_targets_python2_7 ) python_targets_python2_7
-SLOT=0
-SRC_URI=https://github.com/Electrostatics/apbs-pdb2pqr/archive/74fcb8676de69ed04ddab8976a8b05a6caaf4d65.zip -> apbs-1.4.1.zip
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=b04838eb8d0fe55b17589c3ab6d29280
diff --git a/metadata/md5-cache/sci-chemistry/aqua-3.2-r3 b/metadata/md5-cache/sci-chemistry/aqua-3.2-r3
deleted file mode 100644
index ac60c726011a..000000000000
--- a/metadata/md5-cache/sci-chemistry/aqua-3.2-r3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install nofetch prepare setup
-DEPEND=app-shells/tcsh virtual/fortran
-DESCRIPTION=Program suite in this distribution calculates restraint violations
-EAPI=6
-HOMEPAGE=http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html
-IUSE=doc examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=procheck
-RDEPEND=sci-chemistry/procheck virtual/fortran
-RESTRICT=fetch
-SLOT=0
-SRC_URI=aqua3.2.tar.gz doc? ( aqua-3.2-nmr_manual.tar.gz )
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=868759d8f308e88b1f25a24237a4b29a
diff --git a/metadata/md5-cache/sci-chemistry/aria-2.3.2_p20130826 b/metadata/md5-cache/sci-chemistry/aria-2.3.2_p20130826
deleted file mode 100644
index 2aea3ee99566..000000000000
--- a/metadata/md5-cache/sci-chemistry/aria-2.3.2_p20130826
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=install nofetch setup test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix dev-lang/tk:0= >=dev-python/numpy-1.1[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+),tk] >=sci-chemistry/cns-1.2.1-r7[aria,openmp] >=sci-chemistry/ccpn-2.2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/clashlist sci-chemistry/procheck sci-libs/clashscore-db
-DESCRIPTION=Automated NOE assignment and NMR structure calculation
-EAPI=5
-HOMEPAGE=http://aria.pasteur.fr/
-IUSE=examples python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=cns
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix dev-lang/tk:0= >=dev-python/numpy-1.1[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+),tk] >=sci-chemistry/cns-1.2.1-r7[aria,openmp] >=sci-chemistry/ccpn-2.2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/clashlist sci-chemistry/procheck sci-libs/clashscore-db
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=fetch
-SLOT=0
-SRC_URI=http://aria.pasteur.fr/archives/aria2.3.2_08.26.2013.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=3618f8495068d3edb53c83c9dca1db93
diff --git a/metadata/md5-cache/sci-chemistry/autodock-4.2.6 b/metadata/md5-cache/sci-chemistry/autodock-4.2.6
deleted file mode 100644
index 4e7a2b442f11..000000000000
--- a/metadata/md5-cache/sci-chemistry/autodock-4.2.6
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare setup test
-DEPEND=test? ( || ( >=dev-lang/python-2.7.5-r2:2.7 ) ) >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=A suite of automated docking tools
-EAPI=5
-HOMEPAGE=http://autodock.scripps.edu/
-IUSE=examples openmp test
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-SLOT=0
-SRC_URI=http://autodock.scripps.edu/downloads/autodock-registration/tars/dist426/autodocksuite-4.2.6-src.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-any-r1	6faea633ae2f79f6d55dcfd431b79fbf	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=237a416a34f2866e72cbf3f6e1457f06
diff --git a/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2 b/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2
deleted file mode 100644
index e82d89d42ec3..000000000000
--- a/metadata/md5-cache/sci-chemistry/autodock_vina-1.1.2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=dev-libs/boost[threads]
-DESCRIPTION=Program for drug discovery, molecular docking and virtual screening
-EAPI=5
-HOMEPAGE=http://vina.scripps.edu/
-IUSE=debug
-KEYWORDS=amd64 x86
-LICENSE=Apache-2.0
-RDEPEND=dev-libs/boost[threads]
-SLOT=0
-SRC_URI=http://vina.scripps.edu/download/autodock_vina_1_1_2.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=5cede7d56a643e731ae4d39e6f4cba3d
diff --git a/metadata/md5-cache/sci-chemistry/avogadro2-1.90.0_p20180211 b/metadata/md5-cache/sci-chemistry/avogadro2-1.90.0_p20180211
deleted file mode 100644
index 241a2ff5105e..000000000000
--- a/metadata/md5-cache/sci-chemistry/avogadro2-1.90.0_p20180211
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=dev-cpp/eigen:3 test? ( dev-qt/qttest:5 ) sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Advanced molecule editor and visualizer 2
-EAPI=6
-HOMEPAGE=https://www.openchemistry.org/
-IUSE=doc rpc test vtk
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD GPL-2+
-RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 >=sci-libs/avogadrolibs-1.90.0_p20180211[qt5,vtk?] sci-libs/hdf5:= rpc? ( sci-chemistry/molequeue )
-RESTRICT=test
-SLOT=0
-SRC_URI=https://github.com/OpenChemistry/avogadroapp/archive/d5e1f827be7e9d1cc6755fd68a2b42b0b1d2ec32.tar.gz -> avogadro2-1.90.0_p20180211.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=391c91cbb9b9fd9d096fa536ad81fa48
diff --git a/metadata/md5-cache/sci-chemistry/azara-2.8-r5 b/metadata/md5-cache/sci-chemistry/azara-2.8-r5
deleted file mode 100644
index 12a012749ee4..000000000000
--- a/metadata/md5-cache/sci-chemistry/azara-2.8-r5
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare
-DEPEND=x11-libs/libX11 x11-libs/motif:0 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] xpm? ( x11-libs/libXpm )
-DESCRIPTION=A suite of programmes to process and view NMR data
-EAPI=5
-HOMEPAGE=http://www.bio.cam.ac.uk/azara/
-IUSE=xpm X python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux
-LICENSE=AZARA
-RDEPEND=x11-libs/libX11 x11-libs/motif:0 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] xpm? ( x11-libs/libXpm )
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=http://www.bio.cam.ac.uk/ccpn/download/azara/azara-2.8-src.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=61397fa3a1756dbcec5590340b3bf4e1
diff --git a/metadata/md5-cache/sci-chemistry/ball-1.5.0_pre20180419 b/metadata/md5-cache/sci-chemistry/ball-1.5.0_pre20180419
deleted file mode 100644
index ee7b1104fb63..000000000000
--- a/metadata/md5-cache/sci-chemistry/ball-1.5.0_pre20180419
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=dev-cpp/eigen:3 dev-libs/boost:= dev-qt/qtcore:5 dev-qt/qtnetwork:5 dev-qt/qtxml:5 media-libs/glew:0= virtual/opengl x11-libs/libX11 cuda? ( dev-util/nvidia-cuda-toolkit ) fftw? ( sci-libs/fftw:3.0=[threads?] ) gui? ( dev-qt/qtgui:5 dev-qt/qtopengl:5 dev-qt/qtprintsupport:5 dev-qt/qttest:5 dev-qt/qtwidgets:5 ) lpsolve? ( sci-mathematics/lpsolve ) mpi? ( virtual/mpi ) openbabel? ( sci-chemistry/openbabel:= ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) svm? ( sci-libs/libsvm:= ) webengine? ( dev-qt/qtwebchannel:5 dev-qt/qtwebengine:5[widgets] ) sys-devel/bison virtual/yacc doc? ( app-doc/doxygen[dot] ) gui? ( dev-qt/linguist-tools:5 ) python? ( dev-python/sip ) sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Biochemical Algorithms Library
-EAPI=6
-HOMEPAGE=https://github.com/BALL-Project/ball
-IUSE=cuda doc +fftw +gui lpsolve mpi openbabel +python svm test threads webengine python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=LGPL-2 fftw? ( GPL-3 ) openbabel? ( GPL-3 )
-RDEPEND=dev-cpp/eigen:3 dev-libs/boost:= dev-qt/qtcore:5 dev-qt/qtnetwork:5 dev-qt/qtxml:5 media-libs/glew:0= virtual/opengl x11-libs/libX11 cuda? ( dev-util/nvidia-cuda-toolkit ) fftw? ( sci-libs/fftw:3.0=[threads?] ) gui? ( dev-qt/qtgui:5 dev-qt/qtopengl:5 dev-qt/qtprintsupport:5 dev-qt/qttest:5 dev-qt/qtwidgets:5 ) lpsolve? ( sci-mathematics/lpsolve ) mpi? ( virtual/mpi ) openbabel? ( sci-chemistry/openbabel:= ) python? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) svm? ( sci-libs/libsvm:= ) webengine? ( dev-qt/qtwebchannel:5 dev-qt/qtwebengine:5[widgets] )
-REQUIRED_USE=python? ( python_targets_python2_7 ) threads? ( fftw ) webengine? ( gui )
-RESTRICT=test
-SLOT=0
-SRC_URI=https://github.com/BALL-Project/ball/archive/e80b5e2021a72faa36bf9e35207998d4590f2cf4.tar.gz -> ball-1.5.0_pre20180419.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=add5ac25948a2c546744c631b54a616d
diff --git a/metadata/md5-cache/sci-chemistry/bkchem-0.14.0_pre2-r2 b/metadata/md5-cache/sci-chemistry/bkchem-0.14.0_pre2-r2
deleted file mode 100644
index 51e9e3a7a22e..000000000000
--- a/metadata/md5-cache/sci-chemistry/bkchem-0.14.0_pre2-r2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=cairo? ( dev-python/pycairo[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Chemical drawing program
-EAPI=5
-HOMEPAGE=http://bkchem.zirael.org/
-IUSE=cairo python_targets_python2_7
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=cairo? ( dev-python/pycairo[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=http://bkchem.zirael.org/download/bkchem-0.14.0-pre2.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=f1633240a6e979c6aa07d3004b8f8a09
diff --git a/metadata/md5-cache/sci-chemistry/bodr-10 b/metadata/md5-cache/sci-chemistry/bodr-10
deleted file mode 100644
index 707a250a1e7e..000000000000
--- a/metadata/md5-cache/sci-chemistry/bodr-10
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=configure prepare
-DEPEND=dev-libs/libxslt
-DESCRIPTION=The Blue Obelisk Data Repository listing element and isotope properties
-EAPI=5
-HOMEPAGE=https://sourceforge.net/projects/bodr
-KEYWORDS=~amd64 ~x86 ~ppc-macos
-LICENSE=MIT
-SLOT=0
-SRC_URI=mirror://sourceforge/bodr/bodr-10.tar.bz2
-_md5_=659ed1b6d9656c9b9ac73eb1e2b9e2e7
diff --git a/metadata/md5-cache/sci-chemistry/bodr-9-r1 b/metadata/md5-cache/sci-chemistry/bodr-9-r1
deleted file mode 100644
index 7443e10569f1..000000000000
--- a/metadata/md5-cache/sci-chemistry/bodr-9-r1
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=configure prepare
-DEPEND=dev-libs/libxslt
-DESCRIPTION=The Blue Obelisk Data Repository listing element and isotope properties
-EAPI=5
-HOMEPAGE=https://sourceforge.net/projects/bodr
-KEYWORDS=~amd64 ~x86 ~ppc-macos
-LICENSE=MIT
-SLOT=0
-SRC_URI=mirror://sourceforge/bodr/bodr-9.tar.bz2
-_md5_=659ed1b6d9656c9b9ac73eb1e2b9e2e7
diff --git a/metadata/md5-cache/sci-chemistry/burrow-owl-1.5.1 b/metadata/md5-cache/sci-chemistry/burrow-owl-1.5.1
deleted file mode 100644
index fdf1a20897f5..000000000000
--- a/metadata/md5-cache/sci-chemistry/burrow-owl-1.5.1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-libs/g-wrap dev-libs/glib:2 dev-scheme/guile[networking,regex] dev-scheme/guile-cairo dev-scheme/guile-gnome-platform sci-libs/starparse x11-libs/gtk+:2 dev-util/indent virtual/pkgconfig doc? ( app-doc/doxygen ) >=app-portage/elt-patches-20170422 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost )
-DESCRIPTION=Visualize multidimensional nuclear magnetic resonance (NMR) spectra
-EAPI=5
-HOMEPAGE=http://burrow-owl.sourceforge.net/
-IUSE=doc examples static-libs test
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=dev-libs/g-wrap dev-libs/glib:2 dev-scheme/guile[networking,regex] dev-scheme/guile-cairo dev-scheme/guile-gnome-platform sci-libs/starparse x11-libs/gtk+:2
-SLOT=0
-SRC_URI=mirror://sourceforge/burrow-owl/burrow-owl-1.5.1.tar.gz examples? ( mirror://sourceforge/burrow-owl/burrow-demos.tar )
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	virtualx	3a3c4637ea6d5a2113707a644766337c
-_md5_=5f0bc5f8fea2aeba8ccde1148ad9f789
diff --git a/metadata/md5-cache/sci-chemistry/cara-bin-1.8.4-r1 b/metadata/md5-cache/sci-chemistry/cara-bin-1.8.4-r1
deleted file mode 100644
index ae2f9994fd3e..000000000000
--- a/metadata/md5-cache/sci-chemistry/cara-bin-1.8.4-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install
-DESCRIPTION=Analysis of NMR spectra and Computer Aided Resonance Assignment
-EAPI=5
-HOMEPAGE=http://www.nmr.ch
-IUSE=lua
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=CARA
-RDEPEND=!prefix? ( >=media-libs/fontconfig-2.10.92[abi_x86_32(-)] >=media-libs/freetype-2.5.0.1[abi_x86_32(-)] >=x11-libs/libICE-1.0.8-r1[abi_x86_32(-)] >=x11-libs/libSM-1.2.1-r1[abi_x86_32(-)] >=x11-libs/libX11-1.6.2[abi_x86_32(-)] >=x11-libs/libXcursor-1.1.14[abi_x86_32(-)] >=x11-libs/libXext-1.3.2[abi_x86_32(-)] >=x11-libs/libXi-1.7.2[abi_x86_32(-)] >=x11-libs/libXrandr-1.4.2[abi_x86_32(-)] >=x11-libs/libXrender-0.9.8[abi_x86_32(-)] ) virtual/libstdc++ lua? ( dev-lang/lua )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www.cara.nmr-software.org/downloads/cara_1.8.4_linux.gz https://dev.gentoo.org/~jlec/distfiles//Start1.2.cara.xz
-_md5_=a3db6a9ce9e58ca7b5d739c5f5cba2ec
diff --git a/metadata/md5-cache/sci-chemistry/ccpn-2.4.1_p150226 b/metadata/md5-cache/sci-chemistry/ccpn-2.4.1_p150226
deleted file mode 100644
index 3cff08532195..000000000000
--- a/metadata/md5-cache/sci-chemistry/ccpn-2.4.1_p150226
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.1*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-DESCRIPTION=The Collaborative Computing Project for NMR
-EAPI=5
-HOMEPAGE=http://www.ccpn.ac.uk/v2-software/software
-IUSE=+opengl python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=|| ( CCPN LGPL-2.1 )
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.1*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www-old.ccpn.ac.uk/download/ccpnmr/analysis2.4.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/ccpn-update-2.4.1-150226.patch.xz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	portability	2b88d3ecc35035a3b8ab628b49cafb0e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=a4f8d026829b291c8cdfd8ad9fa487ae
diff --git a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2 b/metadata/md5-cache/sci-chemistry/ccpn-2.4.2
deleted file mode 100644
index ba91e07e2159..000000000000
--- a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-DESCRIPTION=The Collaborative Computing Project for NMR
-EAPI=5
-HOMEPAGE=http://www.ccpn.ac.uk/v2-software/software
-IUSE=+opengl python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=|| ( CCPN LGPL-2.1 )
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www-old.ccpn.ac.uk/download/ccpnmr/analysis2.4.2.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	portability	2b88d3ecc35035a3b8ab628b49cafb0e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=e900682ef2dda7306d89814e41121f85
diff --git a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150325 b/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150325
deleted file mode 100644
index 4ca7bfa16723..000000000000
--- a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150325
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-DESCRIPTION=The Collaborative Computing Project for NMR
-EAPI=5
-HOMEPAGE=http://www.ccpn.ac.uk/v2-software/software
-IUSE=+opengl python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=|| ( CCPN LGPL-2.1 )
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www-old.ccpn.ac.uk/download/ccpnmr/analysis2.4.2.tar.gz https://dev.gentoo.org/~jlec/distfiles/ccpn-update-2.4.2-150325.patch.xz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	portability	2b88d3ecc35035a3b8ab628b49cafb0e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=a4f8d026829b291c8cdfd8ad9fa487ae
diff --git a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150413 b/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150413
deleted file mode 100644
index d66791d12d93..000000000000
--- a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150413
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-DESCRIPTION=The Collaborative Computing Project for NMR
-EAPI=5
-HOMEPAGE=http://www.ccpn.ac.uk/v2-software/software
-IUSE=+opengl python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=|| ( CCPN LGPL-2.1 )
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www-old.ccpn.ac.uk/download/ccpnmr/analysis2.4.2.tar.gz https://dev.gentoo.org/~jlec/distfiles/ccpn-update-2.4.2-150413.patch.xz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	portability	2b88d3ecc35035a3b8ab628b49cafb0e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=a4f8d026829b291c8cdfd8ad9fa487ae
diff --git a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150421 b/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150421
deleted file mode 100644
index 2485dd2fcb67..000000000000
--- a/metadata/md5-cache/sci-chemistry/ccpn-2.4.2_p150421
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-DESCRIPTION=The Collaborative Computing Project for NMR
-EAPI=5
-HOMEPAGE=http://www.ccpn.ac.uk/v2-software/software
-IUSE=+opengl python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=|| ( CCPN LGPL-2.1 )
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[ssl,tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-lang/tk:0=[threads] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-tcltk/tix =sci-libs/ccpn-data-2.4.2*[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-biology/psipred x11-libs/libXext x11-libs/libX11 opengl? ( media-libs/freeglut dev-python/pyglet[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www-old.ccpn.ac.uk/download/ccpnmr/analysis2.4.2.tar.gz https://dev.gentoo.org/~jlec/distfiles/ccpn-update-2.4.2-150421.patch.xz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	portability	2b88d3ecc35035a3b8ab628b49cafb0e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=a4f8d026829b291c8cdfd8ad9fa487ae
diff --git a/metadata/md5-cache/sci-chemistry/chemex-0.6.1 b/metadata/md5-cache/sci-chemistry/chemex-0.6.1
deleted file mode 100644
index 5f48605bedcd..000000000000
--- a/metadata/md5-cache/sci-chemistry/chemex-0.6.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=>=dev-python/matplotlib-1.1[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=sci-libs/scipy-0.11[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/setuptools[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-DESCRIPTION=Program to fit chemical exchange induced shift and relaxation data
-EAPI=6
-HOMEPAGE=https://github.com/gbouvignies/chemex
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64
-LICENSE=BSD
-RDEPEND=>=dev-python/matplotlib-1.1[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=sci-libs/scipy-0.11[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-REQUIRED_USE=python_targets_python2_7
-SLOT=0
-SRC_URI=https://github.com/gbouvignies/chemex/archive/0.6.1.tar.gz -> chemex-0.6.1.tar.gz
-_eclasses_=distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	multilib	97f470f374f2e94ccab04a2fb21d811e	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=03312f8f2369be320c6294d4180a3c42
diff --git a/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r2 b/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r2
deleted file mode 100644
index aae3f41beacb..000000000000
--- a/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=gnome-base/gnome-mime-data x11-misc/shared-mime-info dev-util/intltool dev-util/desktop-file-utils dev-libs/libxslt media-gfx/imagemagick[xml,png,svg] media-gfx/inkscape virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=A collection of data files to add support for chemical MIME types
-EAPI=5
-HOMEPAGE=http://chemical-mime.sourceforge.net/
-KEYWORDS=amd64 x86
-LICENSE=LGPL-2.1
-RDEPEND=gnome-base/gnome-mime-data x11-misc/shared-mime-info
-SLOT=0
-SRC_URI=mirror://sourceforge/chemical-mime/chemical-mime-data-0.1.94.tar.bz2
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fdo-mime	995b19d3f30e956b4e1bc5a91fdc4ea7	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=05c326368174a5f93dea291b476ac17f
diff --git a/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r3 b/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r3
deleted file mode 100644
index 4411f55ffb4b..000000000000
--- a/metadata/md5-cache/sci-chemistry/chemical-mime-data-0.1.94-r3
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=configure postinst postrm preinst prepare
-DEPEND=gnome-base/gnome-mime-data x11-misc/shared-mime-info dev-util/intltool dev-util/desktop-file-utils dev-libs/libxslt || ( gnome-base/librsvg media-gfx/imagemagick[xml,png,svg] ) media-gfx/imagemagick[png] virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 dev-util/desktop-file-utils x11-misc/shared-mime-info
-DESCRIPTION=A collection of data files to add support for chemical MIME types
-EAPI=6
-HOMEPAGE=http://chemical-mime.sourceforge.net/
-KEYWORDS=amd64 arm x86
-LICENSE=LGPL-2.1
-RDEPEND=gnome-base/gnome-mime-data x11-misc/shared-mime-info
-SLOT=0
-SRC_URI=mirror://sourceforge/chemical-mime/chemical-mime-data-0.1.94.tar.bz2
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	libtool	0081a71a261724730ec4c248494f044d	multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	xdg	6cd76cc914c1a759dee032778487b57f	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=1487b2e6f40664c22cb2b54cc15c7fcc
diff --git a/metadata/md5-cache/sci-chemistry/chemtool-1.6.13 b/metadata/md5-cache/sci-chemistry/chemtool-1.6.13
deleted file mode 100644
index 3396e8ae759a..000000000000
--- a/metadata/md5-cache/sci-chemistry/chemtool-1.6.13
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-libs/glib:2 media-gfx/transfig x11-libs/gtk+:2 x11-libs/libX11 x11-libs/pango emf? ( media-libs/libemf ) virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=A GTK program for drawing organic molecules
-EAPI=4
-HOMEPAGE=http://ruby.chemie.uni-freiburg.de/~martin/chemtool/
-IUSE=emf gnome nls
-KEYWORDS=amd64 ppc x86
-LICENSE=GPL-2
-RDEPEND=dev-libs/glib:2 media-gfx/transfig x11-libs/gtk+:2 x11-libs/libX11 x11-libs/pango emf? ( media-libs/libemf )
-SLOT=0
-SRC_URI=http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-1.6.13.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=0419d3fd05ddf3d1ba49544e92c6f6e4
diff --git a/metadata/md5-cache/sci-chemistry/chemtool-1.6.14 b/metadata/md5-cache/sci-chemistry/chemtool-1.6.14
deleted file mode 100644
index 5c210a3012a6..000000000000
--- a/metadata/md5-cache/sci-chemistry/chemtool-1.6.14
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-libs/glib:2 media-gfx/transfig x11-libs/gtk+:2 x11-libs/libX11 x11-libs/pango emf? ( media-libs/libemf ) virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=A GTK program for drawing organic molecules
-EAPI=5
-HOMEPAGE=http://ruby.chemie.uni-freiburg.de/~martin/chemtool/
-IUSE=emf gnome nls
-KEYWORDS=~amd64 ~ppc ~x86
-LICENSE=GPL-2
-RDEPEND=dev-libs/glib:2 media-gfx/transfig x11-libs/gtk+:2 x11-libs/libX11 x11-libs/pango emf? ( media-libs/libemf )
-SLOT=0
-SRC_URI=http://ruby.chemie.uni-freiburg.de/~martin/chemtool/chemtool-1.6.14.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=e9b083053d5fe0e1f7cf3a6f14238366
diff --git a/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1 b/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1
deleted file mode 100644
index 0bc226fa0e11..000000000000
--- a/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=install prepare
-DEPEND=>=sci-chemistry/cluster-1.3.081231-r1 sci-chemistry/probe
-DESCRIPTION=Build lists of van der Waals clashes from an input PDB file
-EAPI=4
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/index.php
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=richardson
-RDEPEND=>=sci-chemistry/cluster-1.3.081231-r1 sci-chemistry/probe
-SLOT=0
-SRC_URI=mirror://gentoo/molprobity-3.17.tgz
-_md5_=a77e7433a491d66a2fbf450027a02d66
diff --git a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231 b/metadata/md5-cache/sci-chemistry/cluster-1.3.081231
deleted file mode 100644
index da3bf68bb4f7..000000000000
--- a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=Build lists of collections of interacting items
-EAPI=4
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/index.php
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=richardson
-SLOT=0
-SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/cluster/cluster.1.3.081231.src.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=8d18d1acbf26b98dedd17ce5f26b5f45
diff --git a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1 b/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1
deleted file mode 100644
index f3ff68579d5e..000000000000
--- a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=Build lists of collections of interacting items
-EAPI=5
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/index.php
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=richardson
-SLOT=0
-SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/cluster/cluster.1.3.081231.src.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=08b47969621aa7aec0ce1305311b8854
diff --git a/metadata/md5-cache/sci-chemistry/cns-1.2.1-r8 b/metadata/md5-cache/sci-chemistry/cns-1.2.1-r8
deleted file mode 100644
index 4fe4f6b822ef..000000000000
--- a/metadata/md5-cache/sci-chemistry/cns-1.2.1-r8
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install nofetch postinst prepare setup test
-DEPEND=app-shells/tcsh virtual/fortran
-DESCRIPTION=Crystallography and NMR System
-EAPI=5
-HOMEPAGE=http://cns.csb.yale.edu/
-IUSE=aria openmp
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=cns
-RDEPEND=app-shells/tcsh virtual/fortran
-RESTRICT=fetch test
-SLOT=0
-SRC_URI=cns_solve_1.21_all-mp.tar.gz aria? ( aria2.3.2.tar.gz )
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=5916cc396ab6f9cc576a6b6ad324cca0
diff --git a/metadata/md5-cache/sci-chemistry/cns-1.3_p7-r1 b/metadata/md5-cache/sci-chemistry/cns-1.3_p7-r1
deleted file mode 100644
index 11ecb267d151..000000000000
--- a/metadata/md5-cache/sci-chemistry/cns-1.3_p7-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install nofetch postinst prepare setup test
-DEPEND=app-shells/tcsh virtual/fortran
-DESCRIPTION=Crystallography and NMR System
-EAPI=5
-HOMEPAGE=http://cns.csb.yale.edu/
-IUSE=aria openmp
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=cns
-RDEPEND=app-shells/tcsh virtual/fortran
-RESTRICT=fetch
-SLOT=0
-SRC_URI=cns_solve_1.3_all.tar.gz aria? ( aria2.3.1.tar.gz )
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=37e7e7a3bac4cfcc2fd11c1701ec9719
diff --git a/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1 b/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1
deleted file mode 100644
index 9b350468b959..000000000000
--- a/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test unpack
-DEPEND=sci-libs/libccp4 sci-libs/clipper >=sci-libs/coot-data-2 >=sci-libs/gsl-1.3 sci-libs/fftw:2.1= sci-libs/mmdb:2 sci-libs/monomer-db sci-libs/ssm sci-chemistry/reduce sci-chemistry/probe gnome-base/libgnomecanvas gnome-base/librsvg:2 media-libs/libpng:0= media-libs/freeglut x11-libs/gtk+:2 x11-libs/goocanvas:0 x11-libs/gtkglext virtual/opengl <dev-scheme/guile-2 dev-scheme/net-http dev-scheme/guile-gui >=dev-scheme/guile-lib-0.1.6 dev-scheme/guile-www >=x11-libs/guile-gtk-2.1 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-db/sqlite:3 dev-libs/boost:0=[python,python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-libs/glib:2 >=dev-libs/gmp-4.2.2-r2:0= dev-python/pygobject:2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/pygtk:2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=net-misc/curl-7.19.6 net-dns/libidn sys-libs/readline:0= virtual/pkgconfig >=sys-devel/libtool-2.4-r2 dev-lang/swig sys-devel/bc test? ( dev-scheme/greg ) >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Crystallographic Object-Oriented Toolkit
-EAPI=5
-HOMEPAGE=https://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/
-IUSE=+openmp static-libs test python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=sci-libs/libccp4 sci-libs/clipper >=sci-libs/coot-data-2 >=sci-libs/gsl-1.3 sci-libs/fftw:2.1= sci-libs/mmdb:2 sci-libs/monomer-db sci-libs/ssm sci-chemistry/reduce sci-chemistry/probe gnome-base/libgnomecanvas gnome-base/librsvg:2 media-libs/libpng:0= media-libs/freeglut x11-libs/gtk+:2 x11-libs/goocanvas:0 x11-libs/gtkglext virtual/opengl <dev-scheme/guile-2 dev-scheme/net-http dev-scheme/guile-gui >=dev-scheme/guile-lib-0.1.6 dev-scheme/guile-www >=x11-libs/guile-gtk-2.1 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-db/sqlite:3 dev-libs/boost:0=[python,python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-libs/glib:2 >=dev-libs/gmp-4.2.2-r2:0= dev-python/pygobject:2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/pygtk:2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=net-misc/curl-7.19.6 net-dns/libidn sys-libs/readline:0=
-REQUIRED_USE=python_targets_python2_7
-SLOT=0
-SRC_URI=http://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/source/releases/coot-0.8.2.tar.gz test? ( https://dev.gentoo.org/~jlec/distfiles/coot-0.8.2-greg-data.tar.gz )
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=53a3142631832554af71f4dd9435e68a
diff --git a/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r1 b/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r1
deleted file mode 100644
index c412edd9687c..000000000000
--- a/metadata/md5-cache/sci-chemistry/dssp-2.2.1-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=configure install
-DEPEND=dev-libs/boost:=[threads]
-DESCRIPTION=The protein secondary structure standard
-EAPI=6
-HOMEPAGE=http://swift.cmbi.ru.nl/gv/dssp/
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=Boost-1.0
-RDEPEND=dev-libs/boost:=[threads]
-SLOT=0
-SRC_URI=ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/dssp-2.2.1.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=8926af5031d675f7830e47a5da91b75a
diff --git a/metadata/md5-cache/sci-chemistry/easychem-0.6-r1 b/metadata/md5-cache/sci-chemistry/easychem-0.6-r1
deleted file mode 100644
index b231dc5f09f4..000000000000
--- a/metadata/md5-cache/sci-chemistry/easychem-0.6-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=x11-libs/gtk+:2 app-text/ghostscript-gpl media-gfx/pstoedit dev-lang/perl virtual/pkgconfig
-DESCRIPTION=Chemical structure drawing program - focused on presentation
-EAPI=5
-HOMEPAGE=http://easychem.sourceforge.net/
-KEYWORDS=amd64 ~ppc x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=x11-libs/gtk+:2 app-text/ghostscript-gpl media-gfx/pstoedit
-SLOT=0
-SRC_URI=mirror://sourceforge/easychem/easychem-0.6.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=3c80a70aad976144c2b5b6cd1f70ee25
diff --git a/metadata/md5-cache/sci-chemistry/eden-5.3-r2 b/metadata/md5-cache/sci-chemistry/eden-5.3-r2
deleted file mode 100644
index 2a00b5ed6e7e..000000000000
--- a/metadata/md5-cache/sci-chemistry/eden-5.3-r2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=sci-libs/fftw:2.1 sci-libs/gsl python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] virtual/pkgconfig
-DESCRIPTION=A crystallographic real-space electron-density refinement & optimization program
-EAPI=5
-HOMEPAGE=http://www.gromacs.org/pipermail/eden-users/
-IUSE=double-precision python_targets_python2_7
-KEYWORDS=amd64 x86
-LICENSE=GPL-2
-RDEPEND=sci-libs/fftw:2.1 sci-libs/gsl python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=mirror://gentoo/eden_V5.3.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=595d21c1540fa3217d4dc5e435b47495
diff --git a/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2 b/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2
deleted file mode 100644
index 9450cf004a74..000000000000
--- a/metadata/md5-cache/sci-chemistry/elem-1.0.3-r2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install
-DEPEND=x11-libs/xforms
-DESCRIPTION=periodic table of the elements
-EAPI=6
-HOMEPAGE=http://elem.sourceforge.net/
-KEYWORDS=amd64 sparc x86
-LICENSE=GPL-2
-RDEPEND=x11-libs/xforms
-SLOT=0
-SRC_URI=mirror://sourceforge/elem/elem-src-1.0.3-Linux.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=88d38a09d64f6629b940c997f8921d9d
diff --git a/metadata/md5-cache/sci-chemistry/freeon-1.0.10 b/metadata/md5-cache/sci-chemistry/freeon-1.0.10
deleted file mode 100644
index e02555a18d67..000000000000
--- a/metadata/md5-cache/sci-chemistry/freeon-1.0.10
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=prepare setup
-DEPEND=sci-libs/hdf5 virtual/blas virtual/lapack || ( dev-lang/python:3.6 dev-lang/python:3.5 dev-lang/python:3.4 >=dev-lang/python-2.7.5-r2:2.7 ) >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/fortran
-DESCRIPTION=An experimental suite of programs for linear scaling quantum chemistry
-EAPI=6
-HOMEPAGE=http://www.freeon.org
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3
-RDEPEND=sci-libs/hdf5 virtual/blas virtual/lapack virtual/fortran
-SLOT=0
-SRC_URI=http://download.savannah.gnu.org/releases/freeon/freeon-1.0.10.tar.bz2
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-any-r1	6faea633ae2f79f6d55dcfd431b79fbf	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=9ff4a94d61c7eb3a53af3a8a99550371
diff --git a/metadata/md5-cache/sci-chemistry/freeon-1.0.8-r1 b/metadata/md5-cache/sci-chemistry/freeon-1.0.8-r1
deleted file mode 100644
index 6adb0036cb3e..000000000000
--- a/metadata/md5-cache/sci-chemistry/freeon-1.0.8-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=sci-libs/hdf5 virtual/blas virtual/lapack || ( dev-lang/python:3.4 >=dev-lang/python-2.7.5-r2:2.7 ) >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/fortran
-DESCRIPTION=An experimental suite of programs for linear scaling quantum chemistry
-EAPI=5
-HOMEPAGE=http://www.freeon.org
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3
-RDEPEND=sci-libs/hdf5 virtual/blas virtual/lapack virtual/fortran
-SLOT=0
-SRC_URI=http://download.savannah.gnu.org/releases/freeon/freeon-1.0.8.tar.bz2
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-any-r1	6faea633ae2f79f6d55dcfd431b79fbf	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=26e2cd729d127cc032a2600a85eea7de
diff --git a/metadata/md5-cache/sci-chemistry/gabedit-2.4.6 b/metadata/md5-cache/sci-chemistry/gabedit-2.4.6
deleted file mode 100644
index 094ba7698f6b..000000000000
--- a/metadata/md5-cache/sci-chemistry/gabedit-2.4.6
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=dev-libs/glib:2 x11-libs/cairo x11-libs/gdk-pixbuf:2 x11-libs/gtk+:2 x11-libs/gtkglext x11-libs/gl2ps x11-libs/pango virtual/opengl virtual/glu virtual/pkgconfig
-DESCRIPTION=GUI for computational chemistry packages
-EAPI=5
-HOMEPAGE=http://gabedit.sourceforge.net/
-IUSE=openmp
-KEYWORDS=amd64 x86
-LICENSE=MIT
-RDEPEND=dev-libs/glib:2 x11-libs/cairo x11-libs/gdk-pixbuf:2 x11-libs/gtk+:2 x11-libs/gtkglext x11-libs/gl2ps x11-libs/pango virtual/opengl virtual/glu
-SLOT=0
-SRC_URI=mirror://sourceforge/gabedit/GabeditSrc246.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=de02ad242fcd105a948a6966f70f0395
diff --git a/metadata/md5-cache/sci-chemistry/gabedit-2.4.7 b/metadata/md5-cache/sci-chemistry/gabedit-2.4.7
deleted file mode 100644
index dff57abc55ee..000000000000
--- a/metadata/md5-cache/sci-chemistry/gabedit-2.4.7
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=dev-libs/glib:2 x11-libs/cairo x11-libs/gdk-pixbuf:2 x11-libs/gtk+:2 x11-libs/gtkglext x11-libs/gl2ps x11-libs/pango virtual/opengl virtual/glu virtual/pkgconfig
-DESCRIPTION=GUI for computational chemistry packages
-EAPI=5
-HOMEPAGE=http://gabedit.sourceforge.net/
-IUSE=openmp
-KEYWORDS=~amd64 ~x86
-LICENSE=MIT
-RDEPEND=dev-libs/glib:2 x11-libs/cairo x11-libs/gdk-pixbuf:2 x11-libs/gtk+:2 x11-libs/gtkglext x11-libs/gl2ps x11-libs/pango virtual/opengl virtual/glu
-SLOT=0
-SRC_URI=mirror://sourceforge/gabedit/GabeditSrc247.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=01666c2faf39ab5b987020ca82b48d11
diff --git a/metadata/md5-cache/sci-chemistry/gabedit-2.4.8 b/metadata/md5-cache/sci-chemistry/gabedit-2.4.8
deleted file mode 100644
index 7408ea9ebd4a..000000000000
--- a/metadata/md5-cache/sci-chemistry/gabedit-2.4.8
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=dev-libs/glib:2 x11-libs/cairo x11-libs/gdk-pixbuf:2 x11-libs/gtk+:2 x11-libs/gtkglext x11-libs/gl2ps x11-libs/pango virtual/opengl virtual/glu virtual/pkgconfig
-DESCRIPTION=GUI for computational chemistry packages
-EAPI=5
-HOMEPAGE=http://gabedit.sourceforge.net/
-IUSE=openmp
-KEYWORDS=~amd64 ~x86
-LICENSE=MIT
-RDEPEND=dev-libs/glib:2 x11-libs/cairo x11-libs/gdk-pixbuf:2 x11-libs/gtk+:2 x11-libs/gtkglext x11-libs/gl2ps x11-libs/pango virtual/opengl virtual/glu
-SLOT=0
-SRC_URI=mirror://sourceforge/gabedit/GabeditSrc248.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=7deacca9e5961729a40da9aa988be1df
diff --git a/metadata/md5-cache/sci-chemistry/gelemental-1.2.0-r1 b/metadata/md5-cache/sci-chemistry/gelemental-1.2.0-r1
deleted file mode 100644
index 5a1d05462aa6..000000000000
--- a/metadata/md5-cache/sci-chemistry/gelemental-1.2.0-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=dev-cpp/gtkmm:2.4 dev-cpp/glibmm:2 virtual/pkgconfig sys-devel/gettext dev-util/intltool doc? ( app-doc/doxygen ) >=app-portage/elt-patches-20170422 >=sys-apps/sed-4
-DESCRIPTION=Periodic table viewer with detailed information on the chemical elements
-EAPI=5
-HOMEPAGE=http://freecode.com/projects/gelemental/
-IUSE=doc static-libs
-KEYWORDS=amd64 x86
-LICENSE=GPL-3 MIT
-RDEPEND=dev-cpp/gtkmm:2.4 dev-cpp/glibmm:2
-SLOT=0
-SRC_URI=http://www.kdau.com/files/gelemental-1.2.0.tar.bz2 mirror://debian/pool/main/g/gelemental/gelemental_1.2.0-8.debian.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fdo-mime	995b19d3f30e956b4e1bc5a91fdc4ea7	flag-o-matic	5128c4729303400bd8d4b0b966530955	gnome2-utils	29bb8f7881c95139e532a2d5e47ff834	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=c12aedd5631001f3b869d124c29e80a7
diff --git a/metadata/md5-cache/sci-chemistry/ghemical-3.0.0 b/metadata/md5-cache/sci-chemistry/ghemical-3.0.0
deleted file mode 100644
index fed893798e1a..000000000000
--- a/metadata/md5-cache/sci-chemistry/ghemical-3.0.0
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=configure install prepare
-DEPEND=dev-libs/glib:2 gnome-base/libglade:2.0 sci-chemistry/mpqc >=sci-libs/libghemical-3.0.0 >=x11-libs/liboglappth-1.0.0 virtual/opengl x11-libs/pango x11-libs/gtk+:2 x11-libs/gtkglext openbabel? ( sci-chemistry/openbabel ) virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Chemical quantum mechanics and molecular mechanics
-EAPI=6
-HOMEPAGE=http://bioinformatics.org/ghemical/
-IUSE=openbabel seamonkey threads
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=dev-libs/glib:2 gnome-base/libglade:2.0 sci-chemistry/mpqc >=sci-libs/libghemical-3.0.0 >=x11-libs/liboglappth-1.0.0 virtual/opengl x11-libs/pango x11-libs/gtk+:2 x11-libs/gtkglext openbabel? ( sci-chemistry/openbabel )
-SLOT=0
-SRC_URI=http://bioinformatics.org/ghemical/download/current/ghemical-3.0.0.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	desktop	1b286a7e7143d8c4ec89cd0d2743a097	libtool	0081a71a261724730ec4c248494f044d	multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=b83d361821284ba32468968310f9fe46
diff --git a/metadata/md5-cache/sci-chemistry/gperiodic-2.0.10-r2 b/metadata/md5-cache/sci-chemistry/gperiodic-2.0.10-r2
deleted file mode 100644
index 11129e5e61ee..000000000000
--- a/metadata/md5-cache/sci-chemistry/gperiodic-2.0.10-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=sys-libs/ncurses:0 x11-libs/gtk+:2 x11-libs/cairo[X] nls? ( sys-devel/gettext ) virtual/pkgconfig
-DESCRIPTION=Periodic table application for Linux
-EAPI=4
-HOMEPAGE=http://www.frantz.fi/software/gperiodic.php
-IUSE=nls
-KEYWORDS=amd64 x86
-LICENSE=GPL-2
-RDEPEND=sys-libs/ncurses:0 x11-libs/gtk+:2 x11-libs/cairo[X] nls? ( sys-devel/gettext )
-SLOT=0
-SRC_URI=http://www.frantz.fi/software/gperiodic-2.0.10.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=8ecd12d431782b369384c6d51da05864
diff --git a/metadata/md5-cache/sci-chemistry/gperiodic-3.0.1 b/metadata/md5-cache/sci-chemistry/gperiodic-3.0.1
deleted file mode 100644
index f77ac1055a31..000000000000
--- a/metadata/md5-cache/sci-chemistry/gperiodic-3.0.1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=sys-libs/ncurses:0 x11-libs/gtk+:2 x11-libs/cairo[X] nls? ( sys-devel/gettext ) virtual/pkgconfig
-DESCRIPTION=Periodic table application for Linux
-EAPI=5
-HOMEPAGE=http://www.frantz.fi/software/gperiodic.php
-IUSE=nls
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=sys-libs/ncurses:0 x11-libs/gtk+:2 x11-libs/cairo[X] nls? ( sys-devel/gettext )
-SLOT=0
-SRC_URI=http://downloads.sourceforge.net/project/gperiodic/gperiodic-3.0.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=a81005d9f0815a7b02c801fb7acac90c
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2016.2 b/metadata/md5-cache/sci-chemistry/gromacs-2016.2
deleted file mode 100644
index 883f6deb4157..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-2016.2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-KEYWORDS=amd64 arm x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/2016.2
-SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2016.2.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2016.2.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=73270c55dd4f7113d1e8e278cf4be737
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2016.5 b/metadata/md5-cache/sci-chemistry/gromacs-2016.5
deleted file mode 100644
index ec799790e347..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-2016.5
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-KEYWORDS=~amd64 ~arm ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/2016.5
-SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2016.5.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2016.5.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=73069a3501e9bd0cc41da4d01fe91c59
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2016.9999 b/metadata/md5-cache/sci-chemistry/gromacs-2016.9999
deleted file mode 100644
index 0be6a7299eb7..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-2016.9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/2016.9999
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=3495d5feff978b22807c08c0c4c8c03c
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2018.1 b/metadata/md5-cache/sci-chemistry/gromacs-2018.1
deleted file mode 100644
index fe1eeb898e93..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-2018.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive opencl openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-KEYWORDS=~alpha ~amd64 ~arm ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack )
-SLOT=0/2018.1
-SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2018.1.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2018.1.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=48c913af6e554e0dce78bff52433778a
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2018.2 b/metadata/md5-cache/sci-chemistry/gromacs-2018.2
deleted file mode 100644
index 3b65071e3027..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-2018.2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive opencl openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-KEYWORDS=~alpha ~amd64 ~arm ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack )
-SLOT=0/2018.2
-SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2018.2.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2018.2.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=9999da568916ce3d7d045996d0fae5df
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2018.9999 b/metadata/md5-cache/sci-chemistry/gromacs-2018.9999
deleted file mode 100644
index d0eaf6707ae6..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-2018.9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive opencl openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack )
-SLOT=0/2018.9999
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=9999da568916ce3d7d045996d0fae5df
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999 b/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999
deleted file mode 100644
index 77d91043ef86..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) gsl? ( sci-libs/gsl ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick sys-apps/coreutils ) doc? ( app-doc/doxygen ) dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda doc -double-precision +fftw gsl lapack mkl mpi +offensive openmp +single-precision test +threads zsh-completion cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) gsl? ( sci-libs/gsl ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/4.6.9999
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=88c3797b1c0d776df583435ac1199f8d
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.0.4 b/metadata/md5-cache/sci-chemistry/gromacs-5.0.4
deleted file mode 100644
index e1869dd4f8e2..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-5.0.4
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=5
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas boost cuda +doc -double-precision +fftw lapack +make-symlinks mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-KEYWORDS=~alpha amd64 arm ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/5.0.4
-SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-5.0.4.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-5.0.4.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo	da528e0e6c88b426c83f9b3bce3df2ef	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=0977dfc51fd4bef012cbea7072c49d1a
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999 b/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999
deleted file mode 100644
index 115b3b4d5d4e..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas boost cuda +doc -double-precision +fftw lapack +make-symlinks mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/5.0.9999
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=3badc4fa6539107c36fe98256bfcae90
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.1.3 b/metadata/md5-cache/sci-chemistry/gromacs-5.1.3
deleted file mode 100644
index da03d9e38b71..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-5.1.3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas boost cuda +doc -double-precision +fftw lapack mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-KEYWORDS=~alpha ~amd64 ~arm ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/5.1.3
-SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-5.1.3.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-5.1.3.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=7cdd305e135195a36cbccdcab09c4699
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999 b/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999
deleted file mode 100644
index b311a9010a2f..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas boost cuda +doc -double-precision +fftw lapack mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/5.1.9999
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=7cdd305e135195a36cbccdcab09c4699
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-9999 b/metadata/md5-cache/sci-chemistry/gromacs-9999
deleted file mode 100644
index 32c7779ef2cf..000000000000
--- a/metadata/md5-cache/sci-chemistry/gromacs-9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare pretend test unpack
-DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=The ultimate molecular dynamics simulation package
-EAPI=6
-HOMEPAGE=http://www.gromacs.org/
-IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2
-LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )
-RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi )
-REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack )
-SLOT=0/9999
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	readme.gentoo-r1	54aecea034d5e90bdb0684b80da5c9f3	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=b85be5a83f00ecdf56154f19c818e6aa
diff --git a/metadata/md5-cache/sci-chemistry/hollow-1.2-r1 b/metadata/md5-cache/sci-chemistry/hollow-1.2-r1
deleted file mode 100644
index 8d2e7a4e7965..000000000000
--- a/metadata/md5-cache/sci-chemistry/hollow-1.2-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] app-arch/unzip
-DESCRIPTION=Production of surface images of proteins
-EAPI=5
-HOMEPAGE=http://hollow.sourceforge.net/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=http://hollow.sourceforge.net/hollow-1.2.zip
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=f30b26c5e318f9cc07d344abd4c9fde2
diff --git a/metadata/md5-cache/sci-chemistry/jmol-12.0.45-r1 b/metadata/md5-cache/sci-chemistry/jmol-12.0.45-r1
deleted file mode 100644
index 445902dfa639..000000000000
--- a/metadata/md5-cache/sci-chemistry/jmol-12.0.45-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst preinst prepare prerm setup
-DEPEND=>=virtual/jdk-1.4 !client-only? ( >=app-admin/webapp-config-1.50.15 ) dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Java molecular viever for 3-D chemical structures
-EAPI=5
-HOMEPAGE=http://jmol.sourceforge.net/
-IUSE=client-only vhosts elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2.1
-RDEPEND=>=virtual/jre-1.4 dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=mirror://sourceforge/jmol/Jmol-12.0.45-full.tar.gz https://dev.gentoo.org/~jlec/distfiles/jmol-selfSignedCertificate.store.tar
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	java-ant-2	ea15ab9e838d1062abd6b53de2045d50	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	0ee72667014428e01a01df2345244cf3	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	webapp	6ae2395d7f341093c36057cb4f69101a
-_md5_=e5be2ed02e2c454e5aae9177da649849
diff --git a/metadata/md5-cache/sci-chemistry/jmol-12.2.27-r1 b/metadata/md5-cache/sci-chemistry/jmol-12.2.27-r1
deleted file mode 100644
index b95b48544690..000000000000
--- a/metadata/md5-cache/sci-chemistry/jmol-12.2.27-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst preinst prepare prerm setup
-DEPEND=>=virtual/jdk-1.5 dev-java/saxon:6.5 !client-only? ( >=app-admin/webapp-config-1.50.15 ) dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 sci-libs/naga >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Java molecular viever for 3-D chemical structures
-EAPI=5
-HOMEPAGE=http://jmol.sourceforge.net/
-IUSE=+client-only vhosts elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~x86 ~amd64
-LICENSE=LGPL-2.1
-RDEPEND=>=virtual/jre-1.5 dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 sci-libs/naga >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=mirror://sourceforge/jmol/Jmol-12.2.27-full.tar.gz https://dev.gentoo.org/~jlec/distfiles/jmol-selfSignedCertificate.store.tar
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	java-ant-2	ea15ab9e838d1062abd6b53de2045d50	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	0ee72667014428e01a01df2345244cf3	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	webapp	6ae2395d7f341093c36057cb4f69101a
-_md5_=de2dedca3cc13b31429da06c08257045
diff --git a/metadata/md5-cache/sci-chemistry/ksdssp-040728 b/metadata/md5-cache/sci-chemistry/ksdssp-040728
deleted file mode 100644
index 3e7d7b3b2677..000000000000
--- a/metadata/md5-cache/sci-chemistry/ksdssp-040728
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install unpack
-DEPEND=sci-libs/libpdb++ app-arch/sharutils
-DESCRIPTION=ksdssp is an open source implementation of dssp
-EAPI=4
-HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=sci-libs/libpdb++
-SLOT=0
-SRC_URI=mirror://gentoo/ksdssp-040728.shar
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=9341a83847fb51ec937947def46188ac
diff --git a/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1 b/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1
deleted file mode 100644
index 590db9438c6b..000000000000
--- a/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install unpack
-DEPEND=sci-libs/libpdb++ app-arch/sharutils
-DESCRIPTION=An open source implementation of sci-chemistry/dssp
-EAPI=4
-HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=sci-libs/libpdb++
-SLOT=0
-SRC_URI=mirror://gentoo/ksdssp-040728.shar
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=6bb092702547ffcfeb08d0f5ac9988de
diff --git a/metadata/md5-cache/sci-chemistry/mars-1.2 b/metadata/md5-cache/sci-chemistry/mars-1.2
deleted file mode 100644
index 2e6353f67556..000000000000
--- a/metadata/md5-cache/sci-chemistry/mars-1.2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install
-DESCRIPTION=Robust automatic backbone assignment of proteins
-EAPI=4
-HOMEPAGE=http://www.mpibpc.mpg.de/groups/zweckstetter/_links/software_mars.htm
-IUSE=examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=all-rights-reserved
-RDEPEND=sci-biology/psipred
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www.mpibpc.mpg.de/groups/zweckstetter/_software_files/_mars/mars-1.2_linux.tar.gz
-_md5_=e01a256527afa2d3dd3fe9840c6af7e8
diff --git a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1 b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1
deleted file mode 100644
index 2055d9929940..000000000000
--- a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/setuptools[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/pandas[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/pytables[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] test? ( dev-python/nose[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-DESCRIPTION=Read, write and analyze MD trajectories with only a few lines of Python code
-EAPI=6
-HOMEPAGE=http://mdtraj.org
-IUSE=test python_targets_python2_7 python_targets_python3_5 python_targets_python3_6
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-python/setuptools[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/pandas[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/pytables[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_5 python_targets_python3_6 )
-SLOT=0
-SRC_URI=mirror://pypi/m/mdtraj/mdtraj-1.9.1.tar.gz
-_eclasses_=distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=bf8b1c2b5ce3aaa4234b24e222534dbb
diff --git a/metadata/md5-cache/sci-chemistry/mm-align-20120321 b/metadata/md5-cache/sci-chemistry/mm-align-20120321
deleted file mode 100644
index 2d1cb83d5f28..000000000000
--- a/metadata/md5-cache/sci-chemistry/mm-align-20120321
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=sys-devel/make >=dev-util/cmake-3.9.6 virtual/fortran
-DESCRIPTION=Protein Complex Structural Alignment
-EAPI=6
-HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/MM-align/
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=tm-align
-RDEPEND=virtual/fortran
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/MM-align-20120321.tar.xz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=49c7ebd406de721ad41571fdc9428f3f
diff --git a/metadata/md5-cache/sci-chemistry/modeller-9.20 b/metadata/md5-cache/sci-chemistry/modeller-9.20
deleted file mode 100644
index 659426440a2e..000000000000
--- a/metadata/md5-cache/sci-chemistry/modeller-9.20
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile config configure install postinst postrm prepare setup test
-DEPEND=>=dev-lang/swig-1.3 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Homology or comparative modeling of protein three-dimensional structures
-EAPI=6
-HOMEPAGE=https://salilab.org/modeller/
-IUSE=doc examples python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=modeller
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=https://salilab.org/modeller/9.20/modeller-9.20.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=ee65458b50a4900e4aae940f90888ece
diff --git a/metadata/md5-cache/sci-chemistry/molden-4.8-r2 b/metadata/md5-cache/sci-chemistry/molden-4.8-r2
deleted file mode 100644
index 5dca0463e8c4..000000000000
--- a/metadata/md5-cache/sci-chemistry/molden-4.8-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) x11-misc/gccmakedep app-editors/vim virtual/fortran
-DESCRIPTION=Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac
-EAPI=4
-HOMEPAGE=http://www.cmbi.ru.nl/molden/
-IUSE=opengl
-KEYWORDS=amd64 x86
-LICENSE=MOLDEN
-RDEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) virtual/fortran
-SLOT=0
-SRC_URI=ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden4.8.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=a2052fb8908814c1a8209dbb113b03f4
diff --git a/metadata/md5-cache/sci-chemistry/molden-5.0 b/metadata/md5-cache/sci-chemistry/molden-5.0
deleted file mode 100644
index 13e686ea0e4d..000000000000
--- a/metadata/md5-cache/sci-chemistry/molden-5.0
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) x11-misc/gccmakedep app-editors/vim virtual/fortran
-DESCRIPTION=Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac
-EAPI=4
-HOMEPAGE=http://www.cmbi.ru.nl/molden/
-IUSE=opengl
-KEYWORDS=~amd64 ~x86
-LICENSE=MOLDEN
-RDEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) virtual/fortran
-SLOT=0
-SRC_URI=ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden5.0.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=3f72a917ea1b4679bf81847dd5857b2d
diff --git a/metadata/md5-cache/sci-chemistry/molden-5.5 b/metadata/md5-cache/sci-chemistry/molden-5.5
deleted file mode 100644
index d34eca3759a5..000000000000
--- a/metadata/md5-cache/sci-chemistry/molden-5.5
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) x11-misc/gccmakedep app-editors/vim virtual/fortran
-DESCRIPTION=Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac
-EAPI=6
-HOMEPAGE=http://www.cmbi.ru.nl/molden/
-IUSE=opengl
-KEYWORDS=~amd64 ~x86
-LICENSE=MOLDEN
-RDEPEND=x11-libs/libXmu virtual/glu opengl? ( media-libs/freeglut virtual/opengl ) virtual/fortran
-SLOT=0
-SRC_URI=ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden5.5.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=774949207509932883597b3ca5c7de7d
diff --git a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2
deleted file mode 100644
index 98131d340a72..000000000000
--- a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare
-DEPEND=doc? ( virtual/latex-base )
-DESCRIPTION=Molecular dynamics simulations platform
-EAPI=4
-HOMEPAGE=http://www.ccp5.ac.uk/moldy/moldy.html
-IUSE=doc examples
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos
-LICENSE=GPL-2
-SLOT=0
-SRC_URI=ftp://ftp.earth.ox.ac.uk/pub/keith/moldy-2.16e.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=b14f301c0d5e50d724cd31291ed59e3f
diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.8.0 b/metadata/md5-cache/sci-chemistry/molequeue-0.8.0
deleted file mode 100644
index 9020bdafc2dc..000000000000
--- a/metadata/md5-cache/sci-chemistry/molequeue-0.8.0
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost )
-DESCRIPTION=Abstract, manage and coordinate execution of tasks
-EAPI=6
-HOMEPAGE=https://www.openchemistry.org/projects/molequeue/
-IUSE=+client doc server test +zeromq python_targets_python2_7 test
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= )
-REQUIRED_USE=python_targets_python2_7 server? ( client ) test? ( server )
-SLOT=0
-SRC_URI=https://github.com/OpenChemistry/molequeue/archive/0.8.0.tar.gz -> molequeue-0.8.0.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	virtualx	3a3c4637ea6d5a2113707a644766337c	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=bbfcb0263c616c8a8e05654d801bc1a0
diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0 b/metadata/md5-cache/sci-chemistry/molequeue-0.9.0
deleted file mode 100644
index 8ff3d19471ba..000000000000
--- a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost )
-DESCRIPTION=Abstract, manage and coordinate execution of tasks
-EAPI=6
-HOMEPAGE=https://www.openchemistry.org/projects/molequeue/
-IUSE=+client doc server test +zeromq python_targets_python2_7 test
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= )
-REQUIRED_USE=python_targets_python2_7 server? ( client ) test? ( server )
-SLOT=0
-SRC_URI=https://github.com/OpenChemistry/molequeue/archive/0.9.0.tar.gz -> molequeue-0.9.0.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	virtualx	3a3c4637ea6d5a2113707a644766337c	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=e85bdeb8b1749bdf5adb124f7031ad00
diff --git a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r2 b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r2
deleted file mode 100644
index 94bfb4fbc6f1..000000000000
--- a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install prepare setup
-DEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-DESCRIPTION=Publication-quality molecular visualization package
-EAPI=4
-HOMEPAGE=http://hugin.ethz.ch/wuthrich/software/molmol/index.html
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=molmol
-RDEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-SLOT=0
-SRC_URI=ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-src.tar.gz ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-doc.tar.gz https://dev.gentoo.org/~soap/distfiles/molmol-patches.tbz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=007255bc505f4ae5d941307460933c18
diff --git a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r3 b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r3
deleted file mode 100644
index 7263787ecf24..000000000000
--- a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r3
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install prepare setup
-DEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-DESCRIPTION=Publication-quality molecular visualization package
-EAPI=4
-HOMEPAGE=http://hugin.ethz.ch/wuthrich/software/molmol/index.html
-KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux
-LICENSE=molmol
-RDEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-SLOT=0
-SRC_URI=ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-src.tar.gz ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-doc.tar.gz https://dev.gentoo.org/~soap/distfiles/molmol-patches.tbz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=bf2abde9e74d84d5da6dab168433a2b2
diff --git a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r4 b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r4
deleted file mode 100644
index 3aa8fd0e9de2..000000000000
--- a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r4
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install prepare setup
-DEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg:0 x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-DESCRIPTION=Publication-quality molecular visualization package
-EAPI=5
-HOMEPAGE=http://hugin.ethz.ch/wuthrich/software/molmol/index.html
-KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux
-LICENSE=molmol
-RDEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg:0 x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-SLOT=0
-SRC_URI=ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-src.tar.gz ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-doc.tar.gz https://dev.gentoo.org/~soap/distfiles/molmol-patches.tbz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=28891117f2e6aa6f5074fd8b65a412ad
diff --git a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5
deleted file mode 100644
index 73781a508141..000000000000
--- a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install prepare setup
-DEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg:0 x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-DESCRIPTION=Publication-quality molecular visualization package
-EAPI=5
-HOMEPAGE=http://hugin.ethz.ch/wuthrich/software/molmol/index.html
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=molmol
-RDEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg:0 x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo
-SLOT=0
-SRC_URI=ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-src.tar.gz ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-doc.tar.gz https://dev.gentoo.org/~soap/distfiles/molmol-patches.tbz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=d2f45c4b11493aeaec02179cc4e52089
diff --git a/metadata/md5-cache/sci-chemistry/molscript-2.1.2-r2 b/metadata/md5-cache/sci-chemistry/molscript-2.1.2-r2
deleted file mode 100644
index 831a347c2ad8..000000000000
--- a/metadata/md5-cache/sci-chemistry/molscript-2.1.2-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install nofetch prepare
-DEPEND=media-libs/freeglut media-libs/gd:2= media-libs/libpng:0= virtual/jpeg:0= || ( x11-libs/libXmu x11-libs/libXext x11-libs/libX11 )
-DESCRIPTION=Display 3D molecules (e.g., proteins) in schematic and detailed representations
-EAPI=5
-HOMEPAGE=http://www.avatar.se/molscript/
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=glut molscript
-RDEPEND=media-libs/freeglut media-libs/gd:2= media-libs/libpng:0= virtual/jpeg:0= || ( x11-libs/libXmu x11-libs/libXext x11-libs/libX11 )
-RESTRICT=fetch
-SLOT=0
-SRC_URI=molscript-2.1.2.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=c1991e872be752de44194c5a181e2c17
diff --git a/metadata/md5-cache/sci-chemistry/molsketch-0.4.1-r1 b/metadata/md5-cache/sci-chemistry/molsketch-0.4.1-r1
deleted file mode 100644
index d3ec9b9143fa..000000000000
--- a/metadata/md5-cache/sci-chemistry/molsketch-0.4.1-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=A drawing tool for 2D molecular structures
-EAPI=6
-HOMEPAGE=http://molsketch.sourceforge.net/
-IUSE=test
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5
-SLOT=0
-SRC_URI=mirror://sourceforge/project/molsketch/Molsketch/Beryllium-7%200.4.1/Molsketch-0.4.1-src.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	qmake-utils	bdf97e69a34b864d6d545f4ec3143ff7	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=b45b296034ade945ccc335907c045895
diff --git a/metadata/md5-cache/sci-chemistry/mopac7-1.15 b/metadata/md5-cache/sci-chemistry/mopac7-1.15
deleted file mode 100644
index d92704d29a5b..000000000000
--- a/metadata/md5-cache/sci-chemistry/mopac7-1.15
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup
-DEPEND=dev-libs/libf2c >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/fortran
-DESCRIPTION=Autotooled, updated version of a powerful, fast semi-empirical package
-EAPI=4
-HOMEPAGE=https://sourceforge.net/projects/mopac7/
-IUSE=gmxmopac7 static-libs
-KEYWORDS=amd64 ppc x86 ~amd64-linux
-LICENSE=public-domain
-RDEPEND=dev-libs/libf2c virtual/fortran
-SLOT=0
-SRC_URI=http://www.bioinformatics.org/ghemical/download/current/mopac7-1.15.tar.gz http://wwwuser.gwdg.de/~ggroenh/qmmm/mopac/dcart.f http://wwwuser.gwdg.de/~ggroenh/qmmm/mopac/gmxmop.f
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=a2867fc8118337cc1a30d2814ccbf0cb
diff --git a/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1 b/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1
deleted file mode 100644
index 2ebd7411d009..000000000000
--- a/metadata/md5-cache/sci-chemistry/mopac7-1.15-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=dev-libs/libf2c >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/fortran
-DESCRIPTION=Autotooled, updated version of a powerful, fast semi-empirical package
-EAPI=5
-HOMEPAGE=https://sourceforge.net/projects/mopac7/
-IUSE=gmxmopac7 static-libs
-KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux
-LICENSE=public-domain
-RDEPEND=dev-libs/libf2c virtual/fortran
-SLOT=0
-SRC_URI=http://www.bioinformatics.org/ghemical/download/current/mopac7-1.15.tar.gz http://wwwuser.gwdg.de/~ggroenh/qmmm/mopac/dcart.f http://wwwuser.gwdg.de/~ggroenh/qmmm/mopac/gmxmop.f
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=67c2c03a32c90685053bf010332b49ca
diff --git a/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4 b/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4
deleted file mode 100644
index a0a8c45b3ca6..000000000000
--- a/metadata/md5-cache/sci-chemistry/mpqc-2.3.1-r4
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=configure install postinst prepare test
-DEPEND=virtual/blas virtual/lapack mpi? ( virtual/mpi[cxx] ) tk? ( dev-lang/tk:0 ) dev-lang/perl sys-devel/flex sys-apps/sed virtual/pkgconfig doc? ( app-doc/doxygen media-gfx/graphviz ) >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=The Massively Parallel Quantum Chemistry Program
-EAPI=6
-HOMEPAGE=http://www.mpqc.org/
-IUSE=doc mpi threads static-libs tk
-KEYWORDS=~amd64 ~ppc ~ppc64 ~x86
-LICENSE=GPL-2
-RDEPEND=virtual/blas virtual/lapack mpi? ( virtual/mpi[cxx] ) tk? ( dev-lang/tk:0 )
-SLOT=0
-SRC_URI=mirror://sourceforge/mpqc/mpqc-2.3.1.tar.bz2
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	libtool	0081a71a261724730ec4c248494f044d	multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=a765f25fee693dd1943023f3b114039b
diff --git a/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1 b/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1
deleted file mode 100644
index a1445c85c406..000000000000
--- a/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=install nofetch
-DESCRIPTION=MSMS very efficiently computes triangulations of Solvent Excluded Surfaces
-EAPI=4
-HOMEPAGE=http://mgl.scripps.edu/people/sanner/html/msms_home.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=MSMS
-RESTRICT=fetch
-SLOT=0
-SRC_URI=amd64? ( msms_i86_64Linux2_2.6.1.tar.gz ) x86? ( msms_i86Linux2_2.6.1.tar.gz )
-_md5_=c43ab98fd504ae15a5c6f4c778ac6daf
diff --git a/metadata/md5-cache/sci-chemistry/mustang-3.2.1 b/metadata/md5-cache/sci-chemistry/mustang-3.2.1
deleted file mode 100644
index db3d673cc384..000000000000
--- a/metadata/md5-cache/sci-chemistry/mustang-3.2.1
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare test
-DESCRIPTION=MUltiple STructural AligNment AlGorithm
-EAPI=4
-HOMEPAGE=http://www.csse.monash.edu.au/~karun/Site/mustang.html
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-SLOT=0
-SRC_URI=http://www.csse.unimelb.edu.au/~arun/mustang/mustang_v3.2.1.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=5d72090d79b79e2f40252236d5fd1a00
diff --git a/metadata/md5-cache/sci-chemistry/mustang-3.2.2 b/metadata/md5-cache/sci-chemistry/mustang-3.2.2
deleted file mode 100644
index 320d47cf9889..000000000000
--- a/metadata/md5-cache/sci-chemistry/mustang-3.2.2
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare test
-DESCRIPTION=MUltiple STructural AligNment AlGorithm
-EAPI=5
-HOMEPAGE=http://www.csse.monash.edu.au/~karun/Site/mustang.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-SLOT=0
-SRC_URI=http://www.csse.monash.edu.au/~karun/mustang/mustang_v3.2.2.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=bb9df4c11103cf2d9afb5f1d921b6795
diff --git a/metadata/md5-cache/sci-chemistry/namd-2.10 b/metadata/md5-cache/sci-chemistry/namd-2.10
deleted file mode 100644
index 6ddbd373f662..000000000000
--- a/metadata/md5-cache/sci-chemistry/namd-2.10
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install nofetch postinst prepare
-DEPEND=>=sys-cluster/charm-6.5.1-r2 sci-libs/fftw:3.0 dev-lang/tcl:0= virtual/pkgconfig app-shells/tcsh
-DESCRIPTION=A powerful and highly parallelized molecular dynamics code
-EAPI=6
-HOMEPAGE=http://www.ks.uiuc.edu/Research/namd/
-KEYWORDS=~amd64
-LICENSE=namd
-RDEPEND=>=sys-cluster/charm-6.5.1-r2 sci-libs/fftw:3.0 dev-lang/tcl:0=
-RESTRICT=fetch
-SLOT=0
-SRC_URI=NAMD_2.10_Source.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=a782a5a4f21805f813405ebf3c495b92
diff --git a/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1 b/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1
deleted file mode 100644
index 3c77c11c3183..000000000000
--- a/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=test? ( dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/nose[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-DESCRIPTION=A module for working with NMR data in Python
-EAPI=5
-HOMEPAGE=http://nmrglue.com/
-IUSE=test python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=dev-python/matplotlib[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
-SLOT=0
-SRC_URI=https://github.com/jjhelmus/nmrglue/releases/download/v0.5/nmrglue-0.5.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=f8e983d59085ca640e37002c4bc3a902
diff --git a/metadata/md5-cache/sci-chemistry/numbat-0.999-r1 b/metadata/md5-cache/sci-chemistry/numbat-0.999-r1
deleted file mode 100644
index 3681241381e4..000000000000
--- a/metadata/md5-cache/sci-chemistry/numbat-0.999-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=gnome-base/libglade:2.0 sci-libs/gsl x11-libs/gtk+:2 virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=new user-friendly method built for automatic dX-tensor determination
-EAPI=5
-HOMEPAGE=http://www.nmr.chem.uu.nl/~christophe/numbat.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=gnome-base/libglade:2.0 sci-libs/gsl x11-libs/gtk+:2 sci-chemistry/molmol sci-chemistry/pymol sci-visualization/gnuplot
-SLOT=0
-SRC_URI=http://comp-bio.anu.edu.au/private/downloads/Numbat/Numbat-0.999.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=3b685285507fad73053fa0418f660969
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 b/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1
deleted file mode 100644
index 57f4d722bc0b..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare setup test
-DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) >=dev-util/cmake-2.4.8 doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Interconverts file formats used in molecular modeling
-EAPI=5
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=doc openmp test wxwidgets
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux ~ppc-macos
-LICENSE=GPL-2
-RDEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] )
-SLOT=0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wxwidgets	04e063b0eff26daaea83d859dd9d6e05	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=d880844fba044836488350725d6a444f
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-2.4.1 b/metadata/md5-cache/sci-chemistry/openbabel-2.4.1
deleted file mode 100644
index fea872b1ffb1..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-2.4.1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare setup test
-DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) >=dev-util/cmake-2.4.8 doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Interconverts file formats used in molecular modeling
-EAPI=6
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=doc openmp test wxwidgets
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux ~ppc-macos
-LICENSE=GPL-2
-RDEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] )
-SLOT=0/5.0.0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.4.1.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wxwidgets	04e063b0eff26daaea83d859dd9d6e05	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=4caa4d1a535fbb669ff9539f77cd1032
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2
deleted file mode 100644
index f40a918d0888..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 >=dev-util/cmake-2.4.8 >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6 dev-lang/perl:=[-build(-)]
-DESCRIPTION=Perl bindings for OpenBabel
-EAPI=5
-HOMEPAGE=http://openbabel.sourceforge.net/
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 dev-lang/perl:=[-build(-)]
-SLOT=0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	perl-functions	01e8c68d5a528bbcda4d3c60205983df	perl-module	863b35d127db98823d439f8d73c2d011	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	unpacker	87633b2194cdb56adaa1f5a5c8862c44	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=7d40af4aa49703f526c8935423380ead
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.4.1 b/metadata/md5-cache/sci-chemistry/openbabel-perl-2.4.1
deleted file mode 100644
index 38c350ee5563..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.4.1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.4.1 >=dev-util/cmake-2.4.8 >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6 dev-lang/perl:=
-DESCRIPTION=Perl bindings for OpenBabel
-EAPI=6
-HOMEPAGE=http://openbabel.sourceforge.net/
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.4.1 dev-lang/perl:=
-SLOT=0/5
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.4.1.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	perl-functions	01e8c68d5a528bbcda4d3c60205983df	perl-module	863b35d127db98823d439f8d73c2d011	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=a91e9cd1c3c738647d120c74e710f8e6
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2
deleted file mode 100644
index 274475c2305f..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Python bindings for OpenBabel (including Pybel)
-EAPI=5
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=python_targets_python2_7 python_targets_python3_4
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 )
-SLOT=0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=3f5ab0b18673814af37849f1890bfb74
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-python-2.4.1-r1 b/metadata/md5-cache/sci-chemistry/openbabel-python-2.4.1-r1
deleted file mode 100644
index f55f3095efa0..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-python-2.4.1-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] ~sci-chemistry/openbabel-2.4.1 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Python bindings for OpenBabel (including Pybel)
-EAPI=6
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,python_targets_python3_6(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-)] ~sci-chemistry/openbabel-2.4.1 sys-libs/zlib
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 python_targets_python3_6 )
-SLOT=0/5
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.4.1.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=fb2f770ca5b7001f8b342b6ca9b47ce0
diff --git a/metadata/md5-cache/sci-chemistry/ortep3-1.0.3-r1 b/metadata/md5-cache/sci-chemistry/ortep3-1.0.3-r1
deleted file mode 100644
index 394f6f8daccb..000000000000
--- a/metadata/md5-cache/sci-chemistry/ortep3-1.0.3-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install setup unpack
-DEPEND=sci-libs/pgplot x11-libs/libX11 virtual/fortran
-DESCRIPTION=Thermal ellipsoid plot program for crystal structure illustrations
-EAPI=4
-HOMEPAGE=http://www.ornl.gov/sci/ortep/
-KEYWORDS=~amd64 ~x86
-LICENSE=public-domain
-RDEPEND=sci-libs/pgplot x11-libs/libX11 virtual/fortran
-SLOT=0
-SRC_URI=ftp://ftp.ornl.gov/pub/ortep/src/ortep.f
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=dba669fa4ed64bafdc79c126c520526d
diff --git a/metadata/md5-cache/sci-chemistry/p3d-0.4.3-r1 b/metadata/md5-cache/sci-chemistry/p3d-0.4.3-r1
deleted file mode 100644
index 85330b509373..000000000000
--- a/metadata/md5-cache/sci-chemistry/p3d-0.4.3-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Python module for structural bioinformatics
-EAPI=6
-HOMEPAGE=http://p3d.fufezan.net/
-IUSE=examples python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://nodeload.github.com/fu/p3d/tarball/0.4.3 -> p3d-0.4.3.tar.gz
-_eclasses_=distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	estack	43ddf5aaffa7a8d0482df54d25a66a1f	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-snapshot	3be1ab44131e8c0bbdaa75823008444b	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=9e3832010a5347eb6c9e4bba5441e9a5
diff --git a/metadata/md5-cache/sci-chemistry/p3d-9999 b/metadata/md5-cache/sci-chemistry/p3d-9999
deleted file mode 100644
index b5eb943356fa..000000000000
--- a/metadata/md5-cache/sci-chemistry/p3d-9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=Python module for structural bioinformatics
-EAPI=6
-HOMEPAGE=http://p3d.fufezan.net/
-IUSE=examples python_targets_python2_7
-LICENSE=GPL-3
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-_eclasses_=distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	estack	43ddf5aaffa7a8d0482df54d25a66a1f	git-r3	8f6de46b0aa318aea0e8cac62ece098b	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=588877767f6990c41eead2c39b098d8b
diff --git a/metadata/md5-cache/sci-chemistry/parassign-20130522 b/metadata/md5-cache/sci-chemistry/parassign-20130522
deleted file mode 100644
index dfcdcf962cec..000000000000
--- a/metadata/md5-cache/sci-chemistry/parassign-20130522
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/cython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/scientificpython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-biology/biopython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Assign protein nuclei solely on the basis of pseudocontact shifts (PCS)
-EAPI=5
-HOMEPAGE=http://protchem.lic.leidenuniv.nl/software/parassign/registration
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=Apache-2.0
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 ) || ( python_targets_python2_7 )
-RESTRICT=fetch
-SLOT=0
-SRC_URI=PARAssign_Linux_x64_86.tgz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=799a8d9a4cdb92870a2de2d603db67e9
diff --git a/metadata/md5-cache/sci-chemistry/pdb-tools-0.2.1-r1 b/metadata/md5-cache/sci-chemistry/pdb-tools-0.2.1-r1
deleted file mode 100644
index a224cb1510f3..000000000000
--- a/metadata/md5-cache/sci-chemistry/pdb-tools-0.2.1-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_single_target_pypy? ( >=virtual/pypy-5:0= ) python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_pypy(-)?,python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_pypy(+)?,python_single_target_python2_7(+)?] virtual/fortran
-DESCRIPTION=Tools for manipulating and calculations on wwPDB macromolecule structure files
-EAPI=5
-HOMEPAGE=https://github.com/harmslab/pdbtools
-IUSE=python_targets_pypy python_targets_python2_7 python_single_target_pypy python_single_target_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=python_single_target_pypy? ( >=virtual/pypy-5:0= ) python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_pypy(-)?,python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_pypy(+)?,python_single_target_python2_7(+)?] virtual/fortran
-REQUIRED_USE=^^ ( python_single_target_pypy python_single_target_python2_7 ) python_single_target_pypy? ( python_targets_pypy ) python_single_target_python2_7? ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://pdb-tools.googlecode.com/files/pdbTools_0.2.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=65e79ac4a3cfe79480b4076c8296ae6d
diff --git a/metadata/md5-cache/sci-chemistry/pdb-tools-0.2.1-r2 b/metadata/md5-cache/sci-chemistry/pdb-tools-0.2.1-r2
deleted file mode 100644
index 3898d2de5eba..000000000000
--- a/metadata/md5-cache/sci-chemistry/pdb-tools-0.2.1-r2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] virtual/fortran
-DESCRIPTION=Tools for manipulating and calculations on wwPDB macromolecule structure files
-EAPI=5
-HOMEPAGE=https://github.com/harmslab/pdbtools
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] virtual/fortran
-REQUIRED_USE=python_targets_python2_7
-SLOT=0
-SRC_URI=https://pdb-tools.googlecode.com/files/pdbTools_0.2.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=6829f5fae8d0bf0ffdef84abe46217bb
diff --git a/metadata/md5-cache/sci-chemistry/pdb2pqr-1.9.0-r1 b/metadata/md5-cache/sci-chemistry/pdb2pqr-1.9.0-r1
deleted file mode 100644
index 9990ce07718d..000000000000
--- a/metadata/md5-cache/sci-chemistry/pdb2pqr-1.9.0-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/openbabel-python[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] opal? ( dev-python/zsi[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) pdb2pka? ( sci-chemistry/apbs[python_targets_python2_7(-)?,-python_single_target_python2_7(-),-mpi] ) dev-lang/swig:0 dev-util/scons[python_targets_python2_7] virtual/fortran
-DESCRIPTION=Automated pipeline for performing Poisson-Boltzmann electrostatics calculations
-EAPI=5
-HOMEPAGE=http://www.poissonboltzmann.org/
-IUSE=doc examples opal +pdb2pka python_targets_python2_7
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/openbabel-python[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] opal? ( dev-python/zsi[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) pdb2pka? ( sci-chemistry/apbs[python_targets_python2_7(-)?,-python_single_target_python2_7(-),-mpi] ) virtual/fortran
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/Electrostatics/apbs-pdb2pqr/releases/download/pdb2pqr-1.9.0/pdb2pqr-src-1.9.0.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	scons-utils	abbc7625ff457854eae0edaa1fd55cc7	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=787e26e15fbbe6ccc3debd3915e303dc
diff --git a/metadata/md5-cache/sci-chemistry/pdbcat-1.3 b/metadata/md5-cache/sci-chemistry/pdbcat-1.3
deleted file mode 100644
index ae1d332d025b..000000000000
--- a/metadata/md5-cache/sci-chemistry/pdbcat-1.3
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Manipulate and process PDB files using tools such as Perl, awk, etc
-EAPI=6
-HOMEPAGE=http://www.ks.uiuc.edu/Development/MDTools/pdbcat/
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=free-noncomm
-SLOT=0
-SRC_URI=http://www.ks.uiuc.edu/Development/MDTools/pdbcat/files/pdbcat-1.3.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=4ebe1185f44e21cb0c7d7cbb291a8b30
diff --git a/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504 b/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504
deleted file mode 100644
index c86bbcb16707..000000000000
--- a/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=install
-DESCRIPTION=Convert atom names for amino acids/nucleic acid bases between PDB and CNS format
-EAPI=4
-HOMEPAGE=http://www.mybiosoftware.com/3d-molecular-model/314/
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=dev-lang/perl
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pdbcns.2.0.010504.perl.tgz
-_md5_=89c30d46542bd1560e7c844043f6096c
diff --git a/metadata/md5-cache/sci-chemistry/pdbmat-3.89 b/metadata/md5-cache/sci-chemistry/pdbmat-3.89
deleted file mode 100644
index 893b5dae681c..000000000000
--- a/metadata/md5-cache/sci-chemistry/pdbmat-3.89
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=sys-devel/make >=dev-util/cmake-3.9.6 virtual/fortran
-DESCRIPTION=Calculate Tirion's model from pdb structures
-EAPI=6
-HOMEPAGE=http://ecole.modelisation.free.fr/modes.html
-IUSE=examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=CeCILL-2
-RDEPEND=virtual/fortran
-SLOT=0
-SRC_URI=http://ecole.modelisation.free.fr/enm2011.tar.gz -> pdbmat-3.89.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=5de2f612591221cdc5d57106eab44a2a
diff --git a/metadata/md5-cache/sci-chemistry/povscript+-2.1.2.2.19 b/metadata/md5-cache/sci-chemistry/povscript+-2.1.2.2.19
deleted file mode 100644
index cbf719be819b..000000000000
--- a/metadata/md5-cache/sci-chemistry/povscript+-2.1.2.2.19
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install postinst prepare
-DEPEND=dev-libs/glib:2 media-libs/freeglut media-libs/giflib >=media-libs/libpng-1.4 sci-libs/gts sys-libs/zlib virtual/glu virtual/jpeg virtual/opengl x11-libs/libX11
-DESCRIPTION=Modified molscript that uses POV-Ray, does thermal ellipsoids, and more
-EAPI=4
-HOMEPAGE=https://sites.google.com/site/timfenn/povscript
-KEYWORDS=~amd64 ~ppc ~x86
-LICENSE=glut molscript
-RDEPEND=dev-libs/glib:2 media-libs/freeglut media-libs/giflib >=media-libs/libpng-1.4 sci-libs/gts sys-libs/zlib virtual/glu virtual/jpeg virtual/opengl x11-libs/libX11
-SLOT=0
-SRC_URI=https://sites.google.com/site/timfenn/povscript/molscript-2.1.2pov2.19.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=d87e69cd4cc5cf8349e4703b0a4e0c95
diff --git a/metadata/md5-cache/sci-chemistry/povscript+-2.1.2.2.20 b/metadata/md5-cache/sci-chemistry/povscript+-2.1.2.2.20
deleted file mode 100644
index 7d8ebd8b0acf..000000000000
--- a/metadata/md5-cache/sci-chemistry/povscript+-2.1.2.2.20
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install postinst prepare
-DEPEND=dev-libs/glib:2 media-libs/freeglut media-libs/giflib >=media-libs/libpng-1.4:0= sci-libs/gts sys-libs/zlib virtual/glu virtual/jpeg:0 virtual/opengl x11-libs/libX11
-DESCRIPTION=Modified molscript that uses POV-Ray, does thermal ellipsoids, and more
-EAPI=5
-HOMEPAGE=https://sites.google.com/site/timfenn/povscript
-KEYWORDS=~amd64 ~ppc ~x86
-LICENSE=glut molscript
-RDEPEND=dev-libs/glib:2 media-libs/freeglut media-libs/giflib >=media-libs/libpng-1.4:0= sci-libs/gts sys-libs/zlib virtual/glu virtual/jpeg:0 virtual/opengl x11-libs/libX11
-SLOT=0
-SRC_URI=https://sites.google.com/site/timfenn/povscript/molscript-2.1.2pov2.20.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=0a335f1e70d94904f0d4666c06852abf
diff --git a/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1 b/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1
deleted file mode 100644
index 51ba8b9f3428..000000000000
--- a/metadata/md5-cache/sci-chemistry/prekin-6.51.081122-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install
-DEPEND=x11-libs/libXext x11-libs/libXmu x11-libs/libX11 x11-libs/libXt X? ( >=x11-libs/motif-2.3:0= )
-DESCRIPTION=Prepares molecular kinemages from PDB-format coordinate files
-EAPI=6
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/prekin.php
-IUSE=X
-KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux
-LICENSE=richardson
-RDEPEND=x11-libs/libXext x11-libs/libXmu x11-libs/libX11 x11-libs/libXt X? ( >=x11-libs/motif-2.3:0= )
-SLOT=0
-SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/prekin/prekin.6.51.081122.src.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=af291f824f062c7f5a04ce712fc91bca
diff --git a/metadata/md5-cache/sci-chemistry/probe-2.13.110909 b/metadata/md5-cache/sci-chemistry/probe-2.13.110909
deleted file mode 100644
index 3a60e8129838..000000000000
--- a/metadata/md5-cache/sci-chemistry/probe-2.13.110909
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=install prepare
-DEPEND=app-arch/unzip
-DESCRIPTION=Evaluates atomic packing within or between molecules
-EAPI=4
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/probe.php
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=richardson
-SLOT=0
-SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/probe/probe.2.13.110909.src.zip
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=0a6ad068c88c168f03f956d66a0dae2b
diff --git a/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3 b/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3
deleted file mode 100644
index 26f584f3a2bb..000000000000
--- a/metadata/md5-cache/sci-chemistry/procheck-3.5.4-r3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install nofetch setup
-DEPEND=app-shells/tcsh virtual/fortran
-DESCRIPTION=Checks the stereochemical quality of a protein structure
-EAPI=6
-HOMEPAGE=http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html
-IUSE=doc
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=procheck
-RDEPEND=app-shells/tcsh virtual/fortran
-RESTRICT=fetch
-SLOT=0
-SRC_URI=procheck-3.5.4.tar.gz procheck-3.5.4-README doc? ( procheck-3.5.4-manual.tar.gz )
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=712cf16ac2d7b8f289d352d7444dd58e
diff --git a/metadata/md5-cache/sci-chemistry/prodecomp-3.0-r1 b/metadata/md5-cache/sci-chemistry/prodecomp-3.0-r1
deleted file mode 100644
index c6eb637db245..000000000000
--- a/metadata/md5-cache/sci-chemistry/prodecomp-3.0-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-DESCRIPTION=Decomposition-based analysis of NMR projections
-EAPI=5
-HOMEPAGE=http://www.lundberg.gu.se/nmr/software.php?program=PRODECOMP
-IUSE=examples python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-REQUIRED_USE=python_targets_python2_7
-SLOT=0
-SRC_URI=mirror://gentoo/prodecomp-3.0.tar.bz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=a633166bb498b3f820ae0e4896d0f606
diff --git a/metadata/md5-cache/sci-chemistry/prody-1.6 b/metadata/md5-cache/sci-chemistry/prody-1.6
deleted file mode 100644
index 2553a16cbe25..000000000000
--- a/metadata/md5-cache/sci-chemistry/prody-1.6
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/ipython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/numpy-1.7[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyparsing[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-biology/biopython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] test? ( dev-python/nose[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Protein Dynamics Analysis
-EAPI=5
-HOMEPAGE=http://prody.csb.pitt.edu/ https://github.com/prody/ProDy
-IUSE=test python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=MIT
-RDEPEND=dev-python/ipython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >=dev-python/numpy-1.7[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyparsing[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-biology/biopython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/prody/ProDy/archive/v1.6.tar.gz -> prody-1.6.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=ec3075eb7c34897bec8cd637a3b26c45
diff --git a/metadata/md5-cache/sci-chemistry/propka-3.1_p140511 b/metadata/md5-cache/sci-chemistry/propka-3.1_p140511
deleted file mode 100644
index cff3eb67fe29..000000000000
--- a/metadata/md5-cache/sci-chemistry/propka-3.1_p140511
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/setuptools[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=pKa-value prediction of ionizable groups in protein and protein-ligand complexes
-EAPI=5
-HOMEPAGE=http://propka.ki.ku.dk/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=all-rights-reserved
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=mirror bindist
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/propka-3.1_p140511.tar.xz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=77a50416f48bdac3be53689262fbd770
diff --git a/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2 b/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2
deleted file mode 100644
index 27a8d4c880f0..000000000000
--- a/metadata/md5-cache/sci-chemistry/psi-3.4.0-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=!sci-visualization/extrema virtual/blas virtual/lapack >=sci-libs/libint-1.1.4:1 virtual/pkgconfig dev-util/byacc test? ( dev-lang/perl ) >=app-portage/elt-patches-20170422 virtual/fortran
-DESCRIPTION=Suite for ab initio quantum chemistry computing various molecular properties
-EAPI=4
-HOMEPAGE=http://www.psicode.org/
-IUSE=static-libs test
-KEYWORDS=amd64 x86
-LICENSE=GPL-2
-RDEPEND=!sci-visualization/extrema virtual/blas virtual/lapack >=sci-libs/libint-1.1.4:1 virtual/fortran
-SLOT=0
-SRC_URI=mirror://sourceforge/psicode/psi-3.4.0.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	autotools-utils	5a4611dfba155b1659528663fad4cd5e	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=5edc91712c391640ba4e48fcb6944fee
diff --git a/metadata/md5-cache/sci-chemistry/pymol-1.8.4.0-r1 b/metadata/md5-cache/sci-chemistry/pymol-1.8.4.0-r1
deleted file mode 100644
index c3e95e2f7dcb..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-1.8.4.0-r1
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyopengl[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] media-libs/freeglut media-libs/freetype:2 media-libs/glew:0= media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !sci-chemistry/pymol-apbs-plugin[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] web? ( !dev-python/webpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=A Python-extensible molecular graphics system
-EAPI=6
-HOMEPAGE=http://www.pymol.org/
-IUSE=web python_targets_python2_7
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=PSF-2.2
-RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyopengl[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] media-libs/freeglut media-libs/freetype:2 media-libs/glew:0= media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !sci-chemistry/pymol-apbs-plugin[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] web? ( !dev-python/webpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pymol-1.8.4.0.png.xz mirror://sourceforge/project/pymol/pymol/1.8/pymol-v1.8.4.0.tar.bz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fdo-mime	995b19d3f30e956b4e1bc5a91fdc4ea7	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=2c0832bce75bfa0bb6f397cad9361276
diff --git a/metadata/md5-cache/sci-chemistry/pymol-1.8.6.0 b/metadata/md5-cache/sci-chemistry/pymol-1.8.6.0
deleted file mode 100644
index 22fe7ba3f1de..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-1.8.6.0
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=dev-libs/msgpack[cxx] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyopengl[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] media-libs/freeglut media-libs/freetype:2 media-libs/glew:0= media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !sci-chemistry/pymol-apbs-plugin[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] web? ( !dev-python/webpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=A Python-extensible molecular graphics system
-EAPI=6
-HOMEPAGE=http://www.pymol.org/
-IUSE=web python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=PSF-2.2
-RDEPEND=dev-libs/msgpack[cxx] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyopengl[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] media-libs/freeglut media-libs/freetype:2 media-libs/glew:0= media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !sci-chemistry/pymol-apbs-plugin[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] web? ( !dev-python/webpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pymol-1.8.4.0.png.xz mirror://sourceforge/project/pymol/pymol/1.8/pymol-v1.8.6.0.tar.bz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fdo-mime	995b19d3f30e956b4e1bc5a91fdc4ea7	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=657fbebc8c3871a98238d2a848552252
diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.1.0 b/metadata/md5-cache/sci-chemistry/pymol-2.1.0
deleted file mode 100644
index db468e7abfb1..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-2.1.0
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=dev-libs/msgpack[cxx] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyopengl[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] media-libs/freeglut media-libs/freetype:2 media-libs/glew:0= media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !sci-chemistry/pymol-apbs-plugin[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] web? ( !dev-python/webpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=A Python-extensible molecular graphics system
-EAPI=6
-HOMEPAGE=http://www.pymol.org/
-IUSE=web python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
-LICENSE=PSF-2.2
-RDEPEND=dev-libs/msgpack[cxx] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] dev-python/pyopengl[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] media-libs/freeglut media-libs/freetype:2 media-libs/glew:0= media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !sci-chemistry/pymol-apbs-plugin[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] web? ( !dev-python/webpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pymol-1.8.4.0.png.xz mirror://sourceforge/project/pymol/pymol/2/pymol-v2.1.0.tar.bz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=222060b14c51ebf3352e0a8e60e734eb
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-bni-tools-0.27 b/metadata/md5-cache/sci-chemistry/pymol-plugins-bni-tools-0.27
deleted file mode 100644
index f1adf66d5165..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-bni-tools-0.27
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] app-arch/unzip
-DESCRIPTION=Gives Pymol additional functionalities and presets to the PyMOL GUI
-EAPI=5
-HOMEPAGE=http://bni-tools.sourceforge.net/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=CNRI
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=mirror://sourceforge/bni-tools/bni-tools/bni-tools-0.27/bni-tools-027.zip
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=26e80f9cc26451b29a4f8ca04045008b
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-caver-2.1.2 b/metadata/md5-cache/sci-chemistry/pymol-plugins-caver-2.1.2
deleted file mode 100644
index 487281d23166..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-caver-2.1.2
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=install nofetch
-DEPEND=app-arch/unzip python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Calculation of pathways of proteins from buried cavities to outside solvent
-EAPI=5
-HOMEPAGE=http://loschmidt.chemi.muni.cz/caver/
-IUSE=python_targets_python2_7 elibc_FreeBSD
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=CAVER
-RDEPEND=>=virtual/jre-1.6 sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=fetch
-SLOT=0
-SRC_URI=Caver2_1_2_pymol_plugin.zip
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	java-utils-2	0ee72667014428e01a01df2345244cf3	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=ea9626bbd9e0bdbb979e5d6058e8c5f5
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-dssp-110430-r1 b/metadata/md5-cache/sci-chemistry/pymol-plugins-dssp-110430-r1
deleted file mode 100644
index 0b4191a3da05..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-dssp-110430-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install prepare
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=DSSP Plugin for PyMOL
-EAPI=5
-HOMEPAGE=http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD pymol
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/dssp sci-biology/stride sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pymol-plugins-dssp-110430.py.xz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=79fddf7d3218a4a1abda0a907031f6c7
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-dynamics-2.0.7 b/metadata/md5-cache/sci-chemistry/pymol-plugins-dynamics-2.0.7
deleted file mode 100644
index fedf68f726df..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-dynamics-2.0.7
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/prody[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Molecular dynamics in Pymol
-EAPI=6
-HOMEPAGE=https://github.com/tomaszmakarewicz/Dynamics
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/prody[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/tomaszmakarewicz/Dynamics/archive/v2.0.7.tar.gz -> pymol-plugins-dynamics-2.0.7.tar.gz
-_eclasses_=multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=626974d8e11dfbb3f90a248241b45aee
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-dynamics-2.1.1 b/metadata/md5-cache/sci-chemistry/pymol-plugins-dynamics-2.1.1
deleted file mode 100644
index 3792bac9735f..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-dynamics-2.1.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/prody[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Molecular dynamics in Pymol
-EAPI=6
-HOMEPAGE=https://github.com/tomaszmakarewicz/Dynamics
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/prody[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/tomaszmakarewicz/Dynamics/archive/v2.1.1.tar.gz -> pymol-plugins-dynamics-2.1.1.tar.gz
-_eclasses_=multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=626974d8e11dfbb3f90a248241b45aee
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-emovie-1.0.4 b/metadata/md5-cache/sci-chemistry/pymol-plugins-emovie-1.0.4
deleted file mode 100644
index 3fed5b25534b..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-emovie-1.0.4
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install prepare
-DEPEND=app-arch/unzip
-DESCRIPTION=PyMOL plugin for convinient movie creation
-EAPI=5
-HOMEPAGE=http://www.weizmann.ac.il/ISPC/eMovie.html
-IUSE=python_targets_python2_7
-KEYWORDS=~x86 ~amd64 ~x86-linux ~amd64-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] >sci-chemistry/pymol-0.99[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=http://www.weizmann.ac.il/ISPC/eMovie_package.zip
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=990ac19bca204dd80eea16ac13567dfa
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-msms-100415-r1 b/metadata/md5-cache/sci-chemistry/pymol-plugins-msms-100415-r1
deleted file mode 100644
index 26c72dcce86d..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-msms-100415-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install prepare unpack
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/msms-bin sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=GUI for MSMS and displaying its results in PyMOL
-EAPI=5
-HOMEPAGE=http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD pymol
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/msms-bin sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/pymol_script/msms_pymol.py -> pymol-plugins-msms-100415.py
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=b19ae1fbe95c97233447cb0fbefaded1
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-promol-3.0.2-r1 b/metadata/md5-cache/sci-chemistry/pymol-plugins-promol-3.0.2-r1
deleted file mode 100644
index 1c4d5418ea8e..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-promol-3.0.2-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=Fast and accurate regognition of active sites
-EAPI=5
-HOMEPAGE=http://www.rit.edu/cos/ezviz/ProMOL_dl.html
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux
-LICENSE=all-rights-reserved
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] virtual/python-pmw[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-RESTRICT=mirror bindist
-SLOT=0
-SRC_URI=http://www.rit.edu/cos/ezviz/ProMOL.zip -> pymol-plugins-promol-3.0.2.zip
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=595dd65c0598637d32294e431ac786f1
diff --git a/metadata/md5-cache/sci-chemistry/pymol-plugins-psico-3.1-r1 b/metadata/md5-cache/sci-chemistry/pymol-plugins-psico-3.1-r1
deleted file mode 100644
index a23a48620fb6..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-plugins-psico-3.1-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test unpack
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Pymol ScrIpt COllection
-EAPI=5
-HOMEPAGE=https://github.com/speleo3/pymol-psico/
-IUSE=minimal python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD-2
-RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-biology/biopython[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-libs/mmtk[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] !minimal? ( media-libs/qhull media-video/mplayer sci-biology/stride sci-chemistry/dssp sci-chemistry/mm-align sci-chemistry/pdbmat sci-chemistry/theseus sci-chemistry/tm-align sci-mathematics/diagrtb ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/speleo3/pymol-psico/tarball/3.1 -> pymol-plugins-psico-3.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	distutils-r1	63fea93ca1cc4fdc5fa2247afc4e3a15	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	ltprune	607e058da37aa6dabfa408b7d61da72e	multibuild	35719a9cd25ec71ee49c966f6868454c	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	0b5829eb6369d7af3a834b6eed7b7107	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	3be1ab44131e8c0bbdaa75823008444b	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=43ad844b1f16b243dd59f0b441ca5da8
diff --git a/metadata/md5-cache/sci-chemistry/rasmol-2.7.5.2-r2 b/metadata/md5-cache/sci-chemistry/rasmol-2.7.5.2-r2
deleted file mode 100644
index 5f3e456a62f1..000000000000
--- a/metadata/md5-cache/sci-chemistry/rasmol-2.7.5.2-r2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=dev-libs/cvector dev-util/gtk-builder-convert >=sci-libs/cbflib-0.9.2 >=sci-libs/cqrlib-1.1.2 >=sci-libs/neartree-3.1.1 x11-libs/cairo x11-libs/gtk+:2 x11-libs/libXext x11-libs/libXi x11-libs/vte:0 app-text/rman x11-base/xorg-proto x11-misc/imake virtual/fortran
-DESCRIPTION=Molecular Graphics Visualisation Tool
-EAPI=5
-HOMEPAGE=http://www.openrasmol.org/
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
-LICENSE=|| ( GPL-2 RASLIC )
-RDEPEND=dev-libs/cvector dev-util/gtk-builder-convert >=sci-libs/cbflib-0.9.2 >=sci-libs/cqrlib-1.1.2 >=sci-libs/neartree-3.1.1 x11-libs/cairo x11-libs/gtk+:2 x11-libs/libXext x11-libs/libXi x11-libs/vte:0 virtual/fortran
-SLOT=0
-SRC_URI=mirror://sourceforge/openrasmol/RasMol/RasMol_2.7.5/rasmol-2.7.5.2-13May11.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=8a7375a0ce23cc08c7876397d54ee0c9
diff --git a/metadata/md5-cache/sci-chemistry/raster3d-3.0.2 b/metadata/md5-cache/sci-chemistry/raster3d-3.0.2
deleted file mode 100644
index 4373869a0bfd..000000000000
--- a/metadata/md5-cache/sci-chemistry/raster3d-3.0.2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare setup
-DEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-DESCRIPTION=Generation high quality raster images of proteins or other molecules
-EAPI=4
-HOMEPAGE=http://www.bmsc.washington.edu/raster3d/raster3d.html
-IUSE=gd tiff
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=Artistic-2
-RDEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-SLOT=0
-SRC_URI=http://www.bmsc.washington.edu/raster3d/Raster3D_3.0-2.tar.gz -> Raster3D_3.0-2.tar
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=a59b1e92082f2d173671dfd85c99cf41
diff --git a/metadata/md5-cache/sci-chemistry/raster3d-3.0.3 b/metadata/md5-cache/sci-chemistry/raster3d-3.0.3
deleted file mode 100644
index 9c6c29569870..000000000000
--- a/metadata/md5-cache/sci-chemistry/raster3d-3.0.3
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare setup
-DEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-DESCRIPTION=Generation high quality raster images of proteins or other molecules
-EAPI=5
-HOMEPAGE=http://www.bmsc.washington.edu/raster3d/raster3d.html
-IUSE=gd tiff
-KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux
-LICENSE=Artistic-2
-RDEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-SLOT=0
-SRC_URI=http://www.bmsc.washington.edu/raster3d/Raster3D_3.0-3.tar.gz -> Raster3D_3.0-3.tar
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=342cdfa3f027929bf6f5b74156fe7c8e
diff --git a/metadata/md5-cache/sci-chemistry/reduce-3.16.111118 b/metadata/md5-cache/sci-chemistry/reduce-3.16.111118
deleted file mode 100644
index 96a8d5cbcea7..000000000000
--- a/metadata/md5-cache/sci-chemistry/reduce-3.16.111118
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=compile install
-DEPEND=app-arch/unzip
-DESCRIPTION=Adds hydrogens to a Protein Data Bank (PDB) molecule structure file
-EAPI=6
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/reduce.php
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=richardson
-SLOT=0
-SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/reduce31/reduce.3.16.111118.src.zip
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=4343b0ecf27a7f35d50655af17773bee
diff --git a/metadata/md5-cache/sci-chemistry/relax-4.0.0-r1 b/metadata/md5-cache/sci-chemistry/relax-4.0.0-r1
deleted file mode 100644
index d435d1d4ba25..000000000000
--- a/metadata/md5-cache/sci-chemistry/relax-4.0.0-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install prepare setup test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/Numdifftools[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/wxpython:3.0[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/molmol sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/vmd >=sci-libs/bmrblib-1.0.3[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=sci-libs/minfx-1.0.11[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-visualization/grace sci-visualization/opendx x11-libs/wxGTK:3.0[X] media-gfx/pngcrush test? ( python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/Numdifftools[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/wxpython:3.0[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/molmol sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/vmd >=sci-libs/bmrblib-1.0.3[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=sci-libs/minfx-1.0.11[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-visualization/grace sci-visualization/opendx x11-libs/wxGTK:3.0[X] ) dev-util/scons[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost )
-DESCRIPTION=Molecular dynamics by NMR data analysis
-EAPI=5
-HOMEPAGE=http://www.nmr-relax.com/
-IUSE=test python_targets_python2_7 test
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/Numdifftools[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/matplotlib[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/wxpython:3.0[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/molmol sci-chemistry/pymol[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-chemistry/vmd >=sci-libs/bmrblib-1.0.3[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=sci-libs/minfx-1.0.11[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/scipy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-visualization/grace sci-visualization/opendx x11-libs/wxGTK:3.0[X]
-REQUIRED_USE=python_targets_python2_7
-SLOT=0
-SRC_URI=http://download.gna.org/relax/relax-4.0.0.src.tar.bz2
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	scons-utils	abbc7625ff457854eae0edaa1fd55cc7	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	virtualx	3a3c4637ea6d5a2113707a644766337c	wxwidgets	04e063b0eff26daaea83d859dd9d6e05
-_md5_=a93ba0d630c6f9c5966b92003e43adad
diff --git a/metadata/md5-cache/sci-chemistry/shelx-20141228 b/metadata/md5-cache/sci-chemistry/shelx-20141228
deleted file mode 100644
index b71ccc3b10ab..000000000000
--- a/metadata/md5-cache/sci-chemistry/shelx-20141228
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=install nofetch
-DESCRIPTION=Crystal structure determination from single-crystal diffraction data
-EAPI=5
-HOMEPAGE=http://shelx.uni-ac.gwdg.de/SHELX/
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=free-noncomm
-RESTRICT=fetch
-SLOT=0
-SRC_URI=amd64? ( anode_amd64.bz2 ciftab_amd64.bz2 shelxc_amd64.bz2 shelxd_amd64.bz2 shelxe_amd64.bz2 shelxl_amd64.bz2 shelxs_amd64.bz2 shelxt_amd64.bz2 shredcif_amd64.bz2 ) x86? ( anode_x86.bz2 ciftab_x86.bz2 shelxc_x86.bz2 shelxd_x86.bz2 shelxe_x86.bz2 shelxl_x86.bz2 shelxs_x86.bz2 shelxt_x86.bz2 shredcif_x86.bz2 )
-_md5_=b169253fd8af7308865dff74b5225d8f
diff --git a/metadata/md5-cache/sci-chemistry/sparky-3.115-r2 b/metadata/md5-cache/sci-chemistry/sparky-3.115-r2
deleted file mode 100644
index 452a73c1f758..000000000000
--- a/metadata/md5-cache/sci-chemistry/sparky-3.115-r2
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] app-shells/tcsh dev-lang/tcl:0= dev-lang/tk:0=
-DESCRIPTION=Graphical NMR assignment and integration program for large polymers
-EAPI=6
-HOMEPAGE=http://www.cgl.ucsf.edu/home/sparky/
-IUSE=examples python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=sparky
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] app-shells/tcsh dev-lang/tcl:0= dev-lang/tk:0=
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://www.cgl.ucsf.edu/home/sparky/distrib-3.115/sparky-source-3.115.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=602d930dbfabc45f0336eb464eeadbdb
diff --git a/metadata/md5-cache/sci-chemistry/suitename-0.3.070628 b/metadata/md5-cache/sci-chemistry/suitename-0.3.070628
deleted file mode 100644
index d35f78662f82..000000000000
--- a/metadata/md5-cache/sci-chemistry/suitename-0.3.070628
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DESCRIPTION=The ROC RNA Ontology nomenclature and conformer-list development
-EAPI=4
-HOMEPAGE=http://kinemage.biochem.duke.edu/software/suitename.php
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=richardson
-SLOT=0
-SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/suitename/suitename.0.3.070628.src.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=23e3046482e340a86f5452a8901c8c44
diff --git a/metadata/md5-cache/sci-chemistry/surf-1.0 b/metadata/md5-cache/sci-chemistry/surf-1.0
deleted file mode 100644
index 08b6218f19c3..000000000000
--- a/metadata/md5-cache/sci-chemistry/surf-1.0
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=!www-client/surf sys-apps/ed x11-misc/makedepend
-DESCRIPTION=Solvent accesible Surface calculator
-EAPI=4
-HOMEPAGE=http://www.ks.uiuc.edu/
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos
-LICENSE=SURF
-SLOT=0
-SRC_URI=http://www.ks.uiuc.edu/Research/vmd/extsrcs/surf.tar.Z -> surf-1.0.tar.Z
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=be5c1c785ddb62111f6835e512a09c89
diff --git a/metadata/md5-cache/sci-chemistry/theseus-2.0.6 b/metadata/md5-cache/sci-chemistry/theseus-2.0.6
deleted file mode 100644
index 62d2129eeb46..000000000000
--- a/metadata/md5-cache/sci-chemistry/theseus-2.0.6
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=install prepare
-DEPEND=sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw:2 ) virtual/pkgconfig
-DESCRIPTION=Maximum likelihood superpositioning and analysis of macromolecular structures
-EAPI=5
-HOMEPAGE=http://www.theseus3d.org/
-IUSE=examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw:2 )
-SLOT=0
-SRC_URI=http://www.theseus3d.org/src/theseus_2.0.6.tar.gz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=22ffce5b9a0c8872cf80116e05aed37a
diff --git a/metadata/md5-cache/sci-chemistry/theseus-3.0.0 b/metadata/md5-cache/sci-chemistry/theseus-3.0.0
deleted file mode 100644
index 5ff968972ed0..000000000000
--- a/metadata/md5-cache/sci-chemistry/theseus-3.0.0
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw:2 ) virtual/pkgconfig
-DESCRIPTION=Maximum likelihood superpositioning and analysis of macromolecular structures
-EAPI=5
-HOMEPAGE=http://www.theseus3d.org/
-IUSE=examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw:2 )
-SLOT=0
-SRC_URI=http://www.theseus3d.org/src/theseus_3.0.0.tar.gz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=9015e88fbbd5b940ff5995905a47bcbf
diff --git a/metadata/md5-cache/sci-chemistry/theseus-3.3.0 b/metadata/md5-cache/sci-chemistry/theseus-3.3.0
deleted file mode 100644
index 8159bef5fd46..000000000000
--- a/metadata/md5-cache/sci-chemistry/theseus-3.3.0
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw:2 ) virtual/pkgconfig
-DESCRIPTION=Maximum likelihood superpositioning and analysis of macromolecular structures
-EAPI=5
-HOMEPAGE=http://www.theseus3d.org/
-IUSE=examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-3
-RDEPEND=sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw:2 )
-SLOT=0
-SRC_URI=http://www.theseus3d.org/src/theseus_3.3.0.tar.gz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=9015e88fbbd5b940ff5995905a47bcbf
diff --git a/metadata/md5-cache/sci-chemistry/threeV-1.2-r1 b/metadata/md5-cache/sci-chemistry/threeV-1.2-r1
deleted file mode 100644
index dd8950893211..000000000000
--- a/metadata/md5-cache/sci-chemistry/threeV-1.2-r1
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=3V: Voss Volume Voxelator
-EAPI=6
-HOMEPAGE=http://geometry.molmovdb.org/3v/
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-PDEPEND=sci-chemistry/msms-bin
-SLOT=0
-SRC_URI=http://geometry.molmovdb.org/3v/3v-1.2.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=5ca6079a9193f10a01a27b188fadd411
diff --git a/metadata/md5-cache/sci-chemistry/tinker-8.2.1 b/metadata/md5-cache/sci-chemistry/tinker-8.2.1
deleted file mode 100644
index 91cc904b6f39..000000000000
--- a/metadata/md5-cache/sci-chemistry/tinker-8.2.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install preinst prepare setup test
-DEPEND=>=virtual/jdk-1.6 virtual/fortran java? ( >=dev-java/java-config-2.2.0-r3 )
-DESCRIPTION=Molecular modeling package that includes force fields, such as AMBER and CHARMM
-EAPI=6
-HOMEPAGE=http://dasher.wustl.edu/tinker/
-IUSE=examples elibc_FreeBSD java
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=Tinker
-RDEPEND=>=sci-libs/fftw-3.2.2-r1[fortran,threads] dev-libs/maloc !sys-apps/bar !dev-util/diffuse >=virtual/jre-1.6 virtual/fortran java? ( >=dev-java/java-config-2.2.0-r3 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://dasher.wustl.edu/tinker/downloads/tinker-8.2.1.tar.gz
-_eclasses_=desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	java-pkg-opt-2	77d2e22d0de7640f817d20e861c0ff3f	java-utils-2	0ee72667014428e01a01df2345244cf3	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=f5c8e4b651fff9dc3a4d051350f5c72f
diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20140601 b/metadata/md5-cache/sci-chemistry/tm-align-20140601
deleted file mode 100644
index 1494115f05ee..000000000000
--- a/metadata/md5-cache/sci-chemistry/tm-align-20140601
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=sys-devel/make >=dev-util/cmake-3.9.6 virtual/fortran
-DESCRIPTION=Quick & Accurate Structural Alignment
-EAPI=5
-HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/TM-align/
-IUSE=static custom-cflags
-KEYWORDS=amd64 ppc ppc64 x86 ~amd64-linux ~x86-linux
-LICENSE=tm-align
-RDEPEND=virtual/fortran
-SLOT=0
-SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20140601.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=64e4ccba0de1d22ed789ce34e6a78765
diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20150914 b/metadata/md5-cache/sci-chemistry/tm-align-20150914
deleted file mode 100644
index 47cf8bb5ab3c..000000000000
--- a/metadata/md5-cache/sci-chemistry/tm-align-20150914
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=sys-devel/make >=dev-util/cmake-3.9.6 virtual/fortran
-DESCRIPTION=Quick & Accurate Structural Alignment
-EAPI=5
-HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/TM-align/
-IUSE=static custom-cflags
-KEYWORDS=~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=tm-align
-RDEPEND=virtual/fortran
-SLOT=0
-SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20150914.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	fortran-2	9e7f20c99213f0627ff7f873d4aaa25d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=dffd0173b777f1622e966e7bd1838993
diff --git a/metadata/md5-cache/sci-chemistry/viewmol-2.4.1-r3 b/metadata/md5-cache/sci-chemistry/viewmol-2.4.1-r3
deleted file mode 100644
index ecf6b53ae003..000000000000
--- a/metadata/md5-cache/sci-chemistry/viewmol-2.4.1-r3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=media-libs/libpng:0= media-libs/tiff:0 virtual/glu virtual/opengl x11-libs/libX11 x11-libs/libXi x11-libs/libXmu x11-libs/libXt x11-libs/motif:0 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk(-)] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] x11-base/xorg-proto
-DESCRIPTION=Open-source graphical front end for computational chemistry programs
-EAPI=6
-HOMEPAGE=http://viewmol.sourceforge.net/
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=media-libs/libpng:0= media-libs/tiff:0 virtual/glu virtual/opengl x11-libs/libX11 x11-libs/libXi x11-libs/libXmu x11-libs/libXt x11-libs/motif:0 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7[tk(-)] ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)]
-REQUIRED_USE=python_targets_python2_7
-SLOT=0
-SRC_URI=mirror://sourceforge/viewmol/viewmol-2.4.1.src.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=5c16e9f922010a805910e336d46f96ba
diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.2 b/metadata/md5-cache/sci-chemistry/vmd-1.9.2
deleted file mode 100644
index 22507cd29c0b..000000000000
--- a/metadata/md5-cache/sci-chemistry/vmd-1.9.2
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install nofetch prepare setup
-DEPEND=>=dev-lang/tk-8.6.1 dev-lang/perl dev-libs/expat dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) virtual/pkgconfig dev-lang/swig
-DESCRIPTION=Visual Molecular Dynamics
-EAPI=5
-HOMEPAGE=http://www.ks.uiuc.edu/Research/vmd/
-IUSE=cuda gromacs msms povray sqlite tachyon xinerama python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=vmd
-RDEPEND=>=dev-lang/tk-8.6.1 dev-lang/perl dev-libs/expat dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) sci-biology/stride sci-chemistry/surf x11-terms/xterm msms? ( sci-chemistry/msms-bin ) povray? ( media-gfx/povray )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=fetch
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/vmd-1.9.2-gentoo-patches.tar.xz vmd-1.9.2.src.tar.gz
-_eclasses_=cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=84b53a5dda5afa10bcc3dfd01191756d
diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.3 b/metadata/md5-cache/sci-chemistry/vmd-1.9.3
deleted file mode 100644
index 245b66faabf1..000000000000
--- a/metadata/md5-cache/sci-chemistry/vmd-1.9.3
+++ /dev/null
@@ -1,15 +0,0 @@
-DEFINED_PHASES=compile configure install nofetch prepare setup
-DEPEND=>=dev-lang/tk-8.6.1 dev-lang/perl dev-libs/expat dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) virtual/pkgconfig dev-lang/swig
-DESCRIPTION=Visual Molecular Dynamics
-EAPI=5
-HOMEPAGE=http://www.ks.uiuc.edu/Research/vmd/
-IUSE=cuda gromacs msms povray sqlite tachyon xinerama python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=vmd
-RDEPEND=>=dev-lang/tk-8.6.1 dev-lang/perl dev-libs/expat dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) sci-biology/stride sci-chemistry/surf x11-terms/xterm msms? ( sci-chemistry/msms-bin ) povray? ( media-gfx/povray )
-REQUIRED_USE=python_targets_python2_7
-RESTRICT=fetch
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/vmd-1.9.3-gentoo-patches.tar.xz vmd-1.9.3.src.tar
-_eclasses_=cuda	626969678b9c5735753d8a380c6f295b	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	prefix	e51c7882b7b721e54e684f7eb143cbfe	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-single-r1	26fdbe5e685d53f67303a3a43d9e4848	python-utils-r1	ffa9c3284c6b07b8c9f7933911f63812	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	26ca8a8bd95d6a74122c08ba98a4ee72
-_md5_=4e22c46ead210295e26d7a683b599987
diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-1.4 b/metadata/md5-cache/sci-chemistry/votca-csg-1.4
deleted file mode 100644
index 13d8048ba4e5..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-csg-1.4
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test unpack
-DEPEND==sci-libs/votca-tools-1.4 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=Votca coarse-graining engine
-EAPI=6
-HOMEPAGE=http://www.votca.org
-IUSE=doc examples extras +gromacs hdf5
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-macos
-LICENSE=Apache-2.0
-PDEPEND=extras? ( =sci-chemistry/votca-csgapps-1.4 )
-RDEPEND==sci-libs/votca-tools-1.4 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:*
-SLOT=0
-SRC_URI=https://github.com/votca/csg/archive/v1.4.tar.gz -> votca-csg-1.4.tar.gz doc? ( https://github.com/votca/csg-manual/releases/download/v1.4/votca-csg-manual-1.4.pdf ) examples? ( https://github.com/votca/csg-tutorials/archive/v1.4.tar.gz -> votca-csg-tutorials-1.4.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=463fab16d27a068b37c9cb169ddd9742
diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-1.4.1 b/metadata/md5-cache/sci-chemistry/votca-csg-1.4.1
deleted file mode 100644
index 57b9e3df4a27..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-csg-1.4.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test unpack
-DEPEND==sci-libs/votca-tools-1.4.1 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=Votca coarse-graining engine
-EAPI=6
-HOMEPAGE=http://www.votca.org
-IUSE=doc examples extras +gromacs hdf5
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-macos
-LICENSE=Apache-2.0
-PDEPEND=extras? ( =sci-chemistry/votca-csgapps-1.4.1 )
-RDEPEND==sci-libs/votca-tools-1.4.1 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:*
-SLOT=0
-SRC_URI=https://github.com/votca/csg/archive/v1.4.1.tar.gz -> votca-csg-1.4.1.tar.gz doc? ( https://github.com/votca/csg-manual/releases/download/v1.4.1/votca-csg-manual-1.4.1.pdf ) examples? ( https://github.com/votca/csg-tutorials/archive/v1.4.1.tar.gz -> votca-csg-tutorials-1.4.1.tar.gz )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=aacea0ef1d918938cc5a85bc0cb6a0fb
diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-9999 b/metadata/md5-cache/sci-chemistry/votca-csg-9999
deleted file mode 100644
index a978b2e87c66..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-csg-9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test unpack
-DEPEND==sci-libs/votca-tools-9999 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=Votca coarse-graining engine
-EAPI=6
-HOMEPAGE=http://www.votca.org
-IUSE=doc examples extras +gromacs hdf5
-LICENSE=Apache-2.0
-PDEPEND=extras? ( =sci-chemistry/votca-csgapps-9999 ) doc? ( =app-doc/votca-csg-manual-9999 )
-RDEPEND==sci-libs/votca-tools-9999 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:*
-SLOT=0
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=d12cf969a1530ca51314445f95ebd645
diff --git a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4 b/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4
deleted file mode 100644
index 4e9863566a5f..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=~sci-chemistry/votca-csg-1.4 dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=Extra applications for votca-csg
-EAPI=6
-HOMEPAGE=http://www.votca.org
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-macos
-LICENSE=Apache-2.0
-RDEPEND=~sci-chemistry/votca-csg-1.4
-SLOT=0
-SRC_URI=https://github.com/votca/csgapps/archive/v1.4.tar.gz -> votca-csgapps-1.4.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=c5ea9cb22c7ea08a3e5de84db8643c58
diff --git a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4.1 b/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4.1
deleted file mode 100644
index a38c1fe11704..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4.1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=~sci-chemistry/votca-csg-1.4.1 dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=Extra applications for votca-csg
-EAPI=6
-HOMEPAGE=http://www.votca.org
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-macos
-LICENSE=Apache-2.0
-RDEPEND=~sci-chemistry/votca-csg-1.4.1
-SLOT=0
-SRC_URI=https://github.com/votca/csgapps/archive/v1.4.1.tar.gz -> votca-csgapps-1.4.1.tar.gz
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=8bd22e15b79424c684c4f8e614b48065
diff --git a/metadata/md5-cache/sci-chemistry/votca-csgapps-9999 b/metadata/md5-cache/sci-chemistry/votca-csgapps-9999
deleted file mode 100644
index 31d477f86d60..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-csgapps-9999
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=~sci-chemistry/votca-csg-9999 dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=Extra applications for votca-csg
-EAPI=6
-HOMEPAGE=http://www.votca.org
-LICENSE=Apache-2.0
-RDEPEND=~sci-chemistry/votca-csg-9999
-SLOT=0
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=d0c9f768c43f1834f77e2d2bce69f3d9
diff --git a/metadata/md5-cache/sci-chemistry/votca-ctp-9999 b/metadata/md5-cache/sci-chemistry/votca-ctp-9999
deleted file mode 100644
index 4e459ba952dc..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-ctp-9999
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test unpack
-DEPEND==sci-libs/votca-tools-9999[sqlite] =sci-libs/votca-moo-9999 =sci-chemistry/votca-csg-9999 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=Votca charge transport module
-EAPI=6
-HOMEPAGE=http://www.votca.org
-LICENSE=Apache-2.0
-RDEPEND==sci-libs/votca-tools-9999[sqlite] =sci-libs/votca-moo-9999 =sci-chemistry/votca-csg-9999
-SLOT=0
-_eclasses_=cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=e451679485042db756f543a1a93edc02
diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-1.4 b/metadata/md5-cache/sci-chemistry/votca-xtp-1.4
deleted file mode 100644
index 125738ae4bf0..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-xtp-1.4
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test
-DEPEND==sci-libs/votca-tools-1.4[sqlite] =sci-chemistry/votca-csg-1.4 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=Votca excitation and charge properties module
-EAPI=6
-HOMEPAGE=http://www.votca.org
-IUSE=doc
-KEYWORDS=amd64 x86 ~amd64-linux ~x86-macos
-LICENSE=Apache-2.0
-RDEPEND==sci-libs/votca-tools-1.4[sqlite] =sci-chemistry/votca-csg-1.4
-SLOT=0
-SRC_URI=https://github.com/votca/xtp/archive/v1.4.tar.gz -> votca-xtp-1.4.tar.gz doc? ( https://github.com/votca/xtp/releases/download/v1.4/votca-xtp-manual-1.4.pdf )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=e7eeba247518e31258da81836bf62aca
diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-1.4.1 b/metadata/md5-cache/sci-chemistry/votca-xtp-1.4.1
deleted file mode 100644
index c1b5b8184d6e..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-xtp-1.4.1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test
-DEPEND==sci-libs/votca-tools-1.4.1[sqlite] =sci-chemistry/votca-csg-1.4.1 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6
-DESCRIPTION=Votca excitation and charge properties module
-EAPI=6
-HOMEPAGE=http://www.votca.org
-IUSE=doc
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-macos
-LICENSE=Apache-2.0
-RDEPEND==sci-libs/votca-tools-1.4.1[sqlite] =sci-chemistry/votca-csg-1.4.1
-SLOT=0
-SRC_URI=https://github.com/votca/xtp/archive/v1.4.1.tar.gz -> votca-xtp-1.4.1.tar.gz doc? ( https://github.com/votca/xtp/releases/download/v1.4.1/votca-xtp-manual-1.4.1.pdf )
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=1aaad4c2310e3d4b2a9a63021f0d9e95
diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-9999 b/metadata/md5-cache/sci-chemistry/votca-xtp-9999
deleted file mode 100644
index fa68e171838f..000000000000
--- a/metadata/md5-cache/sci-chemistry/votca-xtp-9999
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare test unpack
-DEPEND==sci-libs/votca-tools-9999[sqlite] =sci-libs/votca-moo-9999 =sci-chemistry/votca-csg-9999 =sci-chemistry/votca-ctp-9999 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.9.6 >=dev-vcs/git-1.8.2.1[curl]
-DESCRIPTION=Votca excitation and charge properties module
-EAPI=6
-HOMEPAGE=http://www.votca.org
-IUSE=doc
-LICENSE=Apache-2.0
-RDEPEND==sci-libs/votca-tools-9999[sqlite] =sci-libs/votca-moo-9999 =sci-chemistry/votca-csg-9999 =sci-chemistry/votca-ctp-9999
-SLOT=0
-_eclasses_=bash-completion-r1	6af26c1ffe65d92d3f525cb715f6250c	cmake-utils	57384a259cf0c7985ce651b2c0865405	desktop	1b286a7e7143d8c4ec89cd0d2743a097	eapi7-ver	d97a56a62c7df8614afddcb25f5ff00f	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	git-r3	8f6de46b0aa318aea0e8cac62ece098b	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	d2e7e7d290428bb25c56dcf2502badc1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	f2c8335407f0b935b0a96d4adf23ef25
-_md5_=14a694b1ebceec2147ed55bdc2d00198
diff --git a/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1 b/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1
deleted file mode 100644
index 32a5d35305c0..000000000000
--- a/metadata/md5-cache/sci-chemistry/wxmacmolplt-7.5-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=configure install prepare
-DEPEND=media-libs/glew:0= media-libs/mesa x11-libs/wxGTK:3.0[X,opengl] flash? ( media-libs/ming ) virtual/pkgconfig >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Chemical 3D graphics program with GAMESS input builder
-EAPI=5
-HOMEPAGE=http://www.scl.ameslab.gov/MacMolPlt/
-IUSE=flash
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=media-libs/glew:0= media-libs/mesa x11-libs/wxGTK:3.0[X,opengl] flash? ( media-libs/ming )
-SLOT=0
-SRC_URI=https://wxmacmolplt.googlecode.com/files/wxmacmolplt-7.5.tar.gz
-_eclasses_=autotools	d0e5375d47f4c809f406eb892e531513	desktop	1b286a7e7143d8c4ec89cd0d2743a097	epatch	9a5f039771f143195164a15a4faa41a1	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	5b8ce72259e08104b337fe28c6de5dbc	flag-o-matic	5128c4729303400bd8d4b0b966530955	libtool	0081a71a261724730ec4c248494f044d	ltprune	607e058da37aa6dabfa408b7d61da72e	multilib	97f470f374f2e94ccab04a2fb21d811e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wxwidgets	04e063b0eff26daaea83d859dd9d6e05
-_md5_=4c8a5d6f6b512619efc226a49f13b7c6
diff --git a/metadata/md5-cache/sci-chemistry/xds-bin-20170930 b/metadata/md5-cache/sci-chemistry/xds-bin-20170930
deleted file mode 100644
index a138e455721b..000000000000
--- a/metadata/md5-cache/sci-chemistry/xds-bin-20170930
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=install postinst unpack
-DESCRIPTION=Software for processing single-crystal X-ray monochromatic diffraction data
-EAPI=6
-HOMEPAGE=http://xds.mpimf-heidelberg.mpg.de/
-IUSE=smp X
-KEYWORDS=-* ~amd64
-LICENSE=free-noncomm
-RDEPEND=X? ( sci-visualization/xds-viewer )
-SLOT=0
-SRC_URI=ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS-INTEL64_Linux_x86_64.tar.gz -> XDS-INTEL64_Linux_x86_64-20170930.tar.gz ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS_html_doc.tar.gz -> XDS_html_doc-20170930.tar.gz
-_md5_=d89ca2393493d0882c4f792e5bceb2bc
diff --git a/metadata/md5-cache/sci-chemistry/xdsstat-bin-171217 b/metadata/md5-cache/sci-chemistry/xdsstat-bin-171217
deleted file mode 100644
index f6b8b3de4b32..000000000000
--- a/metadata/md5-cache/sci-chemistry/xdsstat-bin-171217
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=install
-DESCRIPTION=Prints various statistics (that are not available from XDS itself)
-EAPI=6
-HOMEPAGE=https://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/XDSSTAT
-KEYWORDS=~amd64 ~amd64-linux
-LICENSE=all-rights-reserved
-RDEPEND=sci-chemistry/xds-bin
-RESTRICT=mirror
-SLOT=0
-SRC_URI=amd64? ( ftp://turn5.biologie.uni-konstanz.de/pub/xdsstat-linux64.bz2 ) x86? ( ftp://turn5.biologie.uni-konstanz.de/pub/xdsstat-linux32.bz2 )
-_md5_=1b229b22f12e5f9df7c5ff359ff4fbe4
diff --git a/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001 b/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001
deleted file mode 100644
index 887c5289af6d..000000000000
--- a/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=Cross conversion environment of NMR spectra
-EAPI=6
-HOMEPAGE=http://fermi.pharm.hokudai.ac.jp/olivia/api/index.php/Xyza2pipe_src
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=olivia
-SLOT=0
-SRC_URI=http://fermi.pharm.hokudai.ac.jp/olivia/documents/xyza2pipe.tgz -> xyza2pipe-20121001.tgz
-_eclasses_=multilib	97f470f374f2e94ccab04a2fb21d811e	toolchain-funcs	1e35303c63cd707f6c3422b4493d5607
-_md5_=c93da6bf85d6833951ad1ba692d826ed
author	V3n3RiX <venerix@redcorelinux.org>	2018-07-14 21:08:53 +0100
committer	V3n3RiX <venerix@redcorelinux.org>	2018-07-14 21:08:53 +0100
commit	f33a88393b1c8086dea7cb5b5d84f0e3aa891c83 (patch)
tree	4d9c542a9eafae4e2d389147a63e2d14c93f223f /metadata/md5-cache/sci-chemistry
parent	8376ef56580626e9c0f796d5b85b53a0a1c7d5f5 (diff)