gentoo resync : 23.09.2020

author: V3n3RiX <venerix@redcorelinux.org> 2020-09-23 10:22:15 +0100
committer: V3n3RiX <venerix@redcorelinux.org> 2020-09-23 10:22:15 +0100
commit: 8b4ace9c50842c5b83401ea7b179dcab940387e1 (patch)
tree: 230f3135ceaace633cf93e9838b185c4a6664c2e /metadata/md5-cache/sci-chemistry
parent: 9ee6d97c2883d42f204a533a8bc1f4562df778fb (diff)
38 files changed, 84 insertions, 194 deletions
diff --git a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0 b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0
index 98645d6d0f9b..589911b201f0 100644
--- a/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0
+++ b/metadata/md5-cache/sci-chemistry/GromacsWrapper-0.8.0
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/Becksteinlab/GromacsWrapper/archive/release-0.8.0.tar.gz -> GromacsWrapper-0.8.0.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-snapshot	b1abf460a493fc59ebb25de0df3f09dd	wrapper	4251d4c84c25f59094fd557e0063a974
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-snapshot	b1abf460a493fc59ebb25de0df3f09dd	wrapper	4251d4c84c25f59094fd557e0063a974
 _md5_=3932733dc9fd177f59a16d6e36038120
diff --git a/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0-r1 b/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0-r1
index b44a041505bf..737da9ae2d5e 100644
--- a/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0-r1
+++ b/metadata/md5-cache/sci-chemistry/MDAnalysis-0.18.0-r1
@@ -1,4 +1,4 @@
-BDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-biology/biopython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/GridDataFormats[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/netcdf4-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mmtf-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/gsd[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mock[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/duecredit[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] test? ( dev-python/nose[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
+BDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-biology/biopython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/GridDataFormats[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/netcdf4-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mmtf-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/gsd[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mock[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/duecredit[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] test? ( dev-python/nose[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
 DEFINED_PHASES=compile configure install prepare test
 DESCRIPTION=A python library to analyze and manipulate molecular dynamics trajectories
 EAPI=7
@@ -6,10 +6,10 @@ HOMEPAGE=https://www.mdanalysis.org
 IUSE=test python_targets_python3_6 python_targets_python3_7
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=GPL-2
-RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-biology/biopython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/GridDataFormats[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/netcdf4-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mmtf-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/gsd[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mock[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/duecredit[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
+RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-biology/biopython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/GridDataFormats[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/netcdf4-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mmtf-python[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/gsd[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/mock[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/duecredit[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
 REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=mirror://pypi/M/MDAnalysis/MDAnalysis-0.18.0.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=f3070373659b2043aeeeeb07a35e203d
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=38c5ed86ae5ece108464e88d0c780ff0
diff --git a/metadata/md5-cache/sci-chemistry/Manifest.gz b/metadata/md5-cache/sci-chemistry/Manifest.gz
index 5e24168c16ea..ccd5f37e3db8 100644
--- a/metadata/md5-cache/sci-chemistry/Manifest.gz
+++ b/metadata/md5-cache/sci-chemistry/Manifest.gz
diff --git a/metadata/md5-cache/sci-chemistry/ParmEd-2.7.3 b/metadata/md5-cache/sci-chemistry/ParmEd-2.7.3
deleted file mode 100644
index e540ca565ba2..000000000000
--- a/metadata/md5-cache/sci-chemistry/ParmEd-2.7.3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-DESCRIPTION=Parameter/topology editor and molecular simulator
-EAPI=6
-HOMEPAGE=https://parmed.github.io/ParmEd/html/index.html
-IUSE=python_targets_python3_6
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2
-RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python3_6 )
-SLOT=0
-SRC_URI=https://github.com/ParmEd/ParmEd/archive/2.7.3.tar.gz -> ParmEd-2.7.3.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	b1abf460a493fc59ebb25de0df3f09dd	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=cdbdaf38c7805dc4b608e00a021ba743
diff --git a/metadata/md5-cache/sci-chemistry/ParmEd-3.0.3 b/metadata/md5-cache/sci-chemistry/ParmEd-3.0.3
deleted file mode 100644
index e355d72ee88d..000000000000
--- a/metadata/md5-cache/sci-chemistry/ParmEd-3.0.3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-DESCRIPTION=Parameter/topology editor and molecular simulator
-EAPI=6
-HOMEPAGE=https://parmed.github.io/ParmEd/html/index.html
-IUSE=python_targets_python3_6
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2
-RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python3_6 )
-SLOT=0
-SRC_URI=https://github.com/ParmEd/ParmEd/archive/3.0.3.tar.gz -> ParmEd-3.0.3.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	vcs-snapshot	b1abf460a493fc59ebb25de0df3f09dd	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=1759a2d24533dcf7076abeec2c3b78f2
diff --git a/metadata/md5-cache/sci-chemistry/chemex-2018.10.2 b/metadata/md5-cache/sci-chemistry/chemex-2018.10.2
index fb2ab4e726e2..a86f735e06fb 100644
--- a/metadata/md5-cache/sci-chemistry/chemex-2018.10.2
+++ b/metadata/md5-cache/sci-chemistry/chemex-2018.10.2
@@ -1,16 +1,16 @@
 BDEPEND=python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_6? ( >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/setuptools-42.0.2[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)] )
 DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=sci-libs/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=sci-libs/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=sci-libs/scipy-0.11[python_targets_python3_8(-)] )
+DEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=dev-python/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=dev-python/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=dev-python/scipy-0.11[python_targets_python3_8(-)] )
 DESCRIPTION=Program to fit chemical exchange induced shift and relaxation data
 EAPI=7
 HOMEPAGE=https://github.com/gbouvignies/chemex
 IUSE=test python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8
 KEYWORDS=~amd64
 LICENSE=BSD
-RDEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=sci-libs/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=sci-libs/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=sci-libs/scipy-0.11[python_targets_python3_8(-)] ) python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_6? ( >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/setuptools-42.0.2[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)] )
+RDEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=dev-python/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=dev-python/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=dev-python/scipy-0.11[python_targets_python3_8(-)] ) python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_6? ( >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/setuptools-42.0.2[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)] )
 REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/gbouvignies/chemex/archive/2018.10.2.tar.gz -> chemex-2018.10.2.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=936b2cdefd0254fa0ce1a527d44a0efa
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=a3b9076d5132b8f916d984b1ea8ea345
diff --git a/metadata/md5-cache/sci-chemistry/chemex-2018.10.3 b/metadata/md5-cache/sci-chemistry/chemex-2018.10.3
index cb576bde0526..8d0de9a9d9f8 100644
--- a/metadata/md5-cache/sci-chemistry/chemex-2018.10.3
+++ b/metadata/md5-cache/sci-chemistry/chemex-2018.10.3
@@ -1,16 +1,16 @@
 BDEPEND=python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_6? ( >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/setuptools-42.0.2[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)] )
 DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=sci-libs/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=sci-libs/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=sci-libs/scipy-0.11[python_targets_python3_8(-)] )
+DEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=dev-python/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=dev-python/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=dev-python/scipy-0.11[python_targets_python3_8(-)] )
 DESCRIPTION=Program to fit chemical exchange induced shift and relaxation data
 EAPI=7
 HOMEPAGE=https://github.com/gbouvignies/chemex
 IUSE=test python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8
 KEYWORDS=~amd64
 LICENSE=BSD
-RDEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=sci-libs/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=sci-libs/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=sci-libs/scipy-0.11[python_targets_python3_8(-)] ) python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_6? ( >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/setuptools-42.0.2[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)] )
+RDEPEND=python_single_target_python3_6? ( >=dev-python/asteval-0.9.11[python_targets_python3_6(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_6(-)] >=dev-python/matplotlib-1.1[python_targets_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)] dev-python/setuptools_scm[python_targets_python3_6(-)] >=dev-python/scipy-0.11[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/asteval-0.9.11[python_targets_python3_7(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_7(-)] >=dev-python/matplotlib-1.1[python_targets_python3_7(-)] dev-python/numpy[python_targets_python3_7(-)] dev-python/setuptools_scm[python_targets_python3_7(-)] >=dev-python/scipy-0.11[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/asteval-0.9.11[python_targets_python3_8(-)] >=dev-python/lmfit-0.9.11[python_targets_python3_8(-)] >=dev-python/matplotlib-1.1[python_targets_python3_8(-)] dev-python/numpy[python_targets_python3_8(-)] dev-python/setuptools_scm[python_targets_python3_8(-)] >=dev-python/scipy-0.11[python_targets_python3_8(-)] ) python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_6? ( >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)] ) python_single_target_python3_7? ( >=dev-python/setuptools-42.0.2[python_targets_python3_7(-)] ) python_single_target_python3_8? ( >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)] )
 REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/gbouvignies/chemex/archive/2018.10.3.tar.gz -> chemex-2018.10.3.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=e7a7bcc45e00b83a5d6c6305f8098202
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=682094d1deaf4d500e13aaa2f7f642f3
diff --git a/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1 b/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1
index 0bc226fa0e11..0c27c75e48eb 100644
--- a/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1
+++ b/metadata/md5-cache/sci-chemistry/clashlist-3.17-r1
@@ -1,11 +1,11 @@
 DEFINED_PHASES=install prepare
 DEPEND=>=sci-chemistry/cluster-1.3.081231-r1 sci-chemistry/probe
 DESCRIPTION=Build lists of van der Waals clashes from an input PDB file
-EAPI=4
+EAPI=7
 HOMEPAGE=http://kinemage.biochem.duke.edu/software/index.php
 KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
 LICENSE=richardson
 RDEPEND=>=sci-chemistry/cluster-1.3.081231-r1 sci-chemistry/probe
 SLOT=0
 SRC_URI=mirror://gentoo/molprobity-3.17.tgz
-_md5_=a77e7433a491d66a2fbf450027a02d66
+_md5_=b076551192b8b94402adb1a885ef8931
diff --git a/metadata/md5-cache/sci-chemistry/freeon-1.0.10 b/metadata/md5-cache/sci-chemistry/freeon-1.0.10
deleted file mode 100644
index 4a37e896093f..000000000000
--- a/metadata/md5-cache/sci-chemistry/freeon-1.0.10
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=prepare setup
-DEPEND=sci-libs/hdf5 virtual/blas virtual/lapack || ( dev-lang/python:3.6 ) >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/fortran
-DESCRIPTION=An experimental suite of programs for linear scaling quantum chemistry
-EAPI=6
-HOMEPAGE=http://www.freeon.org
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3
-RDEPEND=sci-libs/hdf5 virtual/blas virtual/lapack virtual/fortran
-SLOT=0
-SRC_URI=http://download.savannah.gnu.org/releases/freeon/freeon-1.0.10.tar.bz2
-_eclasses_=autotools	7d999b62b8749fad43fff00620cedf47	desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	fortran-2	b4796813ccda91c9c0d3463fc90aa969	l10n	8cdd85e169b835d518bc2fd59f780d8e	libtool	f143db5a74ccd9ca28c1234deffede96	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multilib	98584e405e2b0264d37e8f728327fed1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-any-r1	54a3178500786b0a7ede4a23b7f2a6ad	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974
-_md5_=543485c2307080eeae76ca9260fb947b
diff --git a/metadata/md5-cache/sci-chemistry/freeon-1.0.8-r1 b/metadata/md5-cache/sci-chemistry/freeon-1.0.8-r1
deleted file mode 100644
index 9e9d7bafc060..000000000000
--- a/metadata/md5-cache/sci-chemistry/freeon-1.0.8-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=sci-libs/hdf5 virtual/blas virtual/lapack || ( >=dev-lang/python-2.7.5-r2:2.7 ) >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/fortran
-DESCRIPTION=An experimental suite of programs for linear scaling quantum chemistry
-EAPI=5
-HOMEPAGE=http://www.freeon.org
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3
-RDEPEND=sci-libs/hdf5 virtual/blas virtual/lapack virtual/fortran
-SLOT=0
-SRC_URI=http://download.savannah.gnu.org/releases/freeon/freeon-1.0.8.tar.bz2
-_eclasses_=autotools	7d999b62b8749fad43fff00620cedf47	autotools-utils	95db0904ad0f62535e18e5ccb67cce5e	desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	fortran-2	b4796813ccda91c9c0d3463fc90aa969	l10n	8cdd85e169b835d518bc2fd59f780d8e	libtool	f143db5a74ccd9ca28c1234deffede96	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multilib	98584e405e2b0264d37e8f728327fed1	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-any-r1	54a3178500786b0a7ede4a23b7f2a6ad	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974
-_md5_=bd7229f9f40cac132fea1417b74adc9e
diff --git a/metadata/md5-cache/sci-chemistry/gmxapi-0.0.7.1 b/metadata/md5-cache/sci-chemistry/gmxapi-0.0.7.1
index 01e34c3b39c8..26fa896f5564 100644
--- a/metadata/md5-cache/sci-chemistry/gmxapi-0.0.7.1
+++ b/metadata/md5-cache/sci-chemistry/gmxapi-0.0.7.1
@@ -11,5 +11,5 @@ RDEPEND=python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3
 REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 )
 SLOT=0
 SRC_URI=https://github.com/kassonlab/gmxapi/archive/v0.0.7.1.tar.gz -> gmxapi-0.0.7.1.tar.gz
-_eclasses_=cmake-utils	77cd39e6009811bf97a59d91ffd5b54f	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake-utils	77cd39e6009811bf97a59d91ffd5b54f	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=f3cab1a66b71373c8f805ba35c74d750
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2020.1-r1 b/metadata/md5-cache/sci-chemistry/gromacs-2020.1-r1
index e4b00f57186e..fa27dc0a4772 100644
--- a/metadata/md5-cache/sci-chemistry/gromacs-2020.1-r1
+++ b/metadata/md5-cache/sci-chemistry/gromacs-2020.1-r1
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision )
 RESTRICT=!test? ( test )
 SLOT=0/2020.1
 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2020.1.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2020.1.tar.gz )
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+_eclasses_=bash-completion-r1	e5f9c3faab3ab3d1e7e007daa8c736ef	cmake	9f6da23aab151395c55f018fb13a11b2	cuda	c2f1b334711bbbf2130f339636dc7515	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	readme.gentoo-r1	22ae82e140bdd95d17a34fd5fd733190	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=d5a53ced81507917dd3d0a316508cf03
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2020.2 b/metadata/md5-cache/sci-chemistry/gromacs-2020.2
index d941da970254..6aa7896feaa0 100644
--- a/metadata/md5-cache/sci-chemistry/gromacs-2020.2
+++ b/metadata/md5-cache/sci-chemistry/gromacs-2020.2
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision )
 RESTRICT=!test? ( test )
 SLOT=0/2020.2
 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2020.2.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2020.2.tar.gz )
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+_eclasses_=bash-completion-r1	e5f9c3faab3ab3d1e7e007daa8c736ef	cmake	9f6da23aab151395c55f018fb13a11b2	cuda	c2f1b334711bbbf2130f339636dc7515	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	readme.gentoo-r1	22ae82e140bdd95d17a34fd5fd733190	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=d5a53ced81507917dd3d0a316508cf03
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2020.3 b/metadata/md5-cache/sci-chemistry/gromacs-2020.3
index 2b4c6700d626..ffec2bbeee82 100644
--- a/metadata/md5-cache/sci-chemistry/gromacs-2020.3
+++ b/metadata/md5-cache/sci-chemistry/gromacs-2020.3
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision )
 RESTRICT=!test? ( test )
 SLOT=0/2020.3
 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2020.3.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2020.3.tar.gz )
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+_eclasses_=bash-completion-r1	e5f9c3faab3ab3d1e7e007daa8c736ef	cmake	9f6da23aab151395c55f018fb13a11b2	cuda	c2f1b334711bbbf2130f339636dc7515	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	readme.gentoo-r1	22ae82e140bdd95d17a34fd5fd733190	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=d5a53ced81507917dd3d0a316508cf03
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2020.9999 b/metadata/md5-cache/sci-chemistry/gromacs-2020.9999
index 1072c4d5e79a..a57bada1a8fd 100644
--- a/metadata/md5-cache/sci-chemistry/gromacs-2020.9999
+++ b/metadata/md5-cache/sci-chemistry/gromacs-2020.9999
@@ -10,5 +10,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl
 REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ^^ ( python_single_target_python3_6 python_single_target_python3_7 ) ^^ ( python_single_target_python3_6 python_single_target_python3_7 )
 RESTRICT=!test? ( test )
 SLOT=0/2020.9999
-_eclasses_=bash-completion-r1	e5f9c3faab3ab3d1e7e007daa8c736ef	cmake	9f6da23aab151395c55f018fb13a11b2	cuda	c2f1b334711bbbf2130f339636dc7515	distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	git-r3	3e7ec3d6619213460c85e2aa48398441	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	readme.gentoo-r1	22ae82e140bdd95d17a34fd5fd733190	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=bash-completion-r1	e5f9c3faab3ab3d1e7e007daa8c736ef	cmake	9f6da23aab151395c55f018fb13a11b2	cuda	c2f1b334711bbbf2130f339636dc7515	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	git-r3	3e7ec3d6619213460c85e2aa48398441	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	readme.gentoo-r1	22ae82e140bdd95d17a34fd5fd733190	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=0a86848fc709e4d0151040710cdec520
diff --git a/metadata/md5-cache/sci-chemistry/gromacs-9999 b/metadata/md5-cache/sci-chemistry/gromacs-9999
index b9c2872a5835..a9cc33621b5c 100644
--- a/metadata/md5-cache/sci-chemistry/gromacs-9999
+++ b/metadata/md5-cache/sci-chemistry/gromacs-9999
@@ -10,5 +10,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl
 REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ^^ ( python_single_target_python3_6 python_single_target_python3_7 ) ^^ ( python_single_target_python3_6 python_single_target_python3_7 )
 RESTRICT=!test? ( test )
 SLOT=0/9999
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 _md5_=493fec40da67ac96271b2e4340e47b49
diff --git a/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1 b/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1
index 0cb526d2ae53..72983c1ae497 100644
--- a/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1
+++ b/metadata/md5-cache/sci-chemistry/ksdssp-040728-r1
@@ -1,7 +1,8 @@
+BDEPEND=app-arch/sharutils
 DEFINED_PHASES=compile install unpack
-DEPEND=sci-libs/libpdb++ app-arch/sharutils
+DEPEND=sci-libs/libpdb++
 DESCRIPTION=An open source implementation of sci-chemistry/dssp
-EAPI=4
+EAPI=7
 HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=BSD
@@ -9,4 +10,4 @@ RDEPEND=sci-libs/libpdb++
 SLOT=0
 SRC_URI=mirror://gentoo/ksdssp-040728.shar
 _eclasses_=multilib	98584e405e2b0264d37e8f728327fed1	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=6bb092702547ffcfeb08d0f5ac9988de
+_md5_=d9484bfa46cce35d2317ffe1b0a890a9
diff --git a/metadata/md5-cache/sci-chemistry/mars-1.2 b/metadata/md5-cache/sci-chemistry/mars-1.2
index 2e6353f67556..f97e50dbedb7 100644
--- a/metadata/md5-cache/sci-chemistry/mars-1.2
+++ b/metadata/md5-cache/sci-chemistry/mars-1.2
@@ -1,6 +1,6 @@
 DEFINED_PHASES=install
 DESCRIPTION=Robust automatic backbone assignment of proteins
-EAPI=4
+EAPI=7
 HOMEPAGE=http://www.mpibpc.mpg.de/groups/zweckstetter/_links/software_mars.htm
 IUSE=examples
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
@@ -9,4 +9,4 @@ RDEPEND=sci-biology/psipred
 RESTRICT=mirror
 SLOT=0
 SRC_URI=http://www.mpibpc.mpg.de/groups/zweckstetter/_software_files/_mars/mars-1.2_linux.tar.gz
-_md5_=e01a256527afa2d3dd3fe9840c6af7e8
+_md5_=f6a63e84cadb25384910cffc3166919a
diff --git a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1 b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1
index 1e217b47f2a5..6fdd19da5bdd 100644
--- a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1
+++ b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.1
@@ -1,15 +1,15 @@
 DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/setuptools[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pandas[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pytables[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] test? ( dev-python/nose[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
+DEPEND=dev-python/setuptools[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pandas[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pytables[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] test? ( dev-python/nose[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
 DESCRIPTION=Read, write and analyze MD trajectories with only a few lines of Python code
 EAPI=6
 HOMEPAGE=http://mdtraj.org
 IUSE=test python_targets_python3_6
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=GPL-2
-RDEPEND=dev-python/setuptools[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pandas[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pytables[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
+RDEPEND=dev-python/setuptools[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pandas[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/pytables[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/networkx[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
 REQUIRED_USE=|| ( python_targets_python3_6 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=mirror://pypi/m/mdtraj/mdtraj-1.9.1.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=d5c2def55b907191790ccfb305372914
+_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_md5_=3679ad7edb4bbd083ab88fc471d38274
diff --git a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4 b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4
index 1fbead0ff1e2..8b1167bc3412 100644
--- a/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4
+++ b/metadata/md5-cache/sci-chemistry/mdtraj-1.9.4
@@ -1,16 +1,16 @@
-BDEPEND=test? ( dev-python/astor[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pandas[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pytables[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/pytest-4.5.0[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
+BDEPEND=test? ( dev-python/astor[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pandas[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pytables[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/pytest-4.5.0[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
 DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/astor[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pandas[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pytables[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] test? ( dev-python/jupyter_client[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/nbformat[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] )
+DEPEND=dev-python/astor[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pandas[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pytables[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] test? ( dev-python/jupyter_client[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/nbformat[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] )
 DESCRIPTION=Read, write and analyze MD trajectories with only a few lines of Python code
 EAPI=7
 HOMEPAGE=http://mdtraj.org
 IUSE=test python_targets_python3_6 python_targets_python3_7
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=GPL-2
-RDEPEND=dev-python/astor[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pandas[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pytables[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
+RDEPEND=dev-python/astor[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pandas[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/pytables[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/networkx[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-)]
 REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 )
 RESTRICT=test
 SLOT=0
 SRC_URI=mirror://pypi/m/mdtraj/mdtraj-1.9.4.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=924ae7767b08ab47b31b1d5addcee812
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=1ae70ed8a9aec9a5ad82f0c3aba93a33
diff --git a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2 b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2
index 06ab930eea1e..e668be98e4d0 100644
--- a/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2
+++ b/metadata/md5-cache/sci-chemistry/moldy-2.16e-r2
@@ -1,12 +1,12 @@
+BDEPEND=doc? ( virtual/latex-base )
 DEFINED_PHASES=compile configure install prepare
-DEPEND=doc? ( virtual/latex-base )
 DESCRIPTION=Molecular dynamics simulations platform
-EAPI=4
+EAPI=7
 HOMEPAGE=http://www.ccp5.ac.uk/moldy/moldy.html
-IUSE=doc examples
+IUSE=doc
 KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos
 LICENSE=GPL-2
 SLOT=0
 SRC_URI=ftp://ftp.earth.ox.ac.uk/pub/keith/moldy-2.16e.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multilib	98584e405e2b0264d37e8f728327fed1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974
-_md5_=afeb79a823045eb1436c484607123fe0
+_eclasses_=multilib	98584e405e2b0264d37e8f728327fed1	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=f50dfe7ac4461c3972cef37ca176f922
diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0 b/metadata/md5-cache/sci-chemistry/molequeue-0.9.0
deleted file mode 100644
index 9ec2c2eb0ca9..000000000000
--- a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0
+++ /dev/null
@@ -1,16 +0,0 @@
-BDEPEND=doc? ( app-doc/doxygen ) dev-util/ninja >=dev-util/cmake-3.9.6 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost )
-DEFINED_PHASES=compile configure install prepare setup test
-DEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7] ) dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= )
-DESCRIPTION=Abstract, manage and coordinate execution of tasks
-EAPI=7
-HOMEPAGE=https://www.openchemistry.org/projects/molequeue/
-IUSE=+client doc server test +zeromq +python_single_target_python2_7 test
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-RDEPEND=python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7] ) dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= )
-REQUIRED_USE=^^ ( python_single_target_python2_7 ) server? ( client ) test? ( server )
-RESTRICT=!test? ( test )
-SLOT=0
-SRC_URI=https://github.com/OpenChemistry/molequeue/archive/0.9.0.tar.gz -> molequeue-0.9.0.tar.gz
-_eclasses_=cmake-utils	77cd39e6009811bf97a59d91ffd5b54f	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	virtualx	e49dbce7ac14426e1155497476915307	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=3ef65c2ea193f8263a6ea903ea0a4e0f
diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1 b/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1
index 33cae8413263..645c93e3a911 100644
--- a/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1
+++ b/metadata/md5-cache/sci-chemistry/molequeue-0.9.0-r1
@@ -12,5 +12,5 @@ REQUIRED_USE=server? ( client ) test? ( server ) zeromq? ( || ( python_targets_p
 RESTRICT=test
 SLOT=0
 SRC_URI=https://github.com/OpenChemistry/molequeue/archive/0.9.0.tar.gz -> molequeue-0.9.0.tar.gz
-_eclasses_=cmake	9f6da23aab151395c55f018fb13a11b2	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	virtualx	e49dbce7ac14426e1155497476915307	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=cmake	9f6da23aab151395c55f018fb13a11b2	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	virtualx	e49dbce7ac14426e1155497476915307	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=fc3e8c64088aa790e70ec73b41f67c52
diff --git a/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1 b/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1
index f28f19843b67..3d428b1cf33c 100644
--- a/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1
+++ b/metadata/md5-cache/sci-chemistry/msms-bin-2.6.1-r1
@@ -1,10 +1,10 @@
 DEFINED_PHASES=install nofetch
 DESCRIPTION=MSMS very efficiently computes triangulations of Solvent Excluded Surfaces
-EAPI=4
+EAPI=7
 HOMEPAGE=http://mgl.scripps.edu/people/sanner/html/msms_home.html
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=MSMS
 RESTRICT=fetch
 SLOT=0
 SRC_URI=amd64? ( msms_i86_64Linux2_2.6.1.tar.gz ) x86? ( msms_i86Linux2_2.6.1.tar.gz )
-_md5_=3e34caffb4c7867665e677de1665ecf3
+_md5_=935332859dd18e14fdeb66f971d4454e
diff --git a/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1 b/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1
index c3282cd5e703..9c0d81d7873e 100644
--- a/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1
+++ b/metadata/md5-cache/sci-chemistry/nmrglue-0.5-r1
@@ -1,15 +1,15 @@
 DEFINED_PHASES=compile configure install prepare test
-DEPEND=test? ( dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/nose[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
+DEPEND=test? ( dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/nose[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
 DESCRIPTION=A module for working with NMR data in Python
 EAPI=5
 HOMEPAGE=https://nmrglue.com/
 IUSE=test python_targets_python3_6
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=BSD
-RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-libs/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
+RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/scipy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
 REQUIRED_USE=|| ( python_targets_python3_6 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/jjhelmus/nmrglue/releases/download/v0.5/nmrglue-0.5.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=ab2665c2ea9926fa516db763ec3d8fc1
+_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_md5_=98e1c85234da0f89ab5a0caf323fe699
diff --git a/metadata/md5-cache/sci-chemistry/nmrglue-0.7 b/metadata/md5-cache/sci-chemistry/nmrglue-0.7
index 400d813f1e3b..865973f73b9d 100644
--- a/metadata/md5-cache/sci-chemistry/nmrglue-0.7
+++ b/metadata/md5-cache/sci-chemistry/nmrglue-0.7
@@ -1,16 +1,16 @@
-BDEPEND=test? ( dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/nose-1.3.7-r4[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+BDEPEND=test? ( dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/nose-1.3.7-r4[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
 DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+DEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
 DESCRIPTION=A module for working with NMR data in Python
 EAPI=7
 HOMEPAGE=https://nmrglue.com/
 IUSE=test python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=BSD
-RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-libs/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+RDEPEND=dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/scipy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
 REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/jjhelmus/nmrglue/releases/download/v0.7/nmrglue-0.7.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=b64f2d8ee3234b3054be24eb5488b692
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=104f5a98bd5a8b0c23ea72e2e8497e5b
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-python-2.4.1-r1 b/metadata/md5-cache/sci-chemistry/openbabel-python-2.4.1-r1
deleted file mode 100644
index 478be5c5a0f0..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-python-2.4.1-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] ~sci-chemistry/openbabel-2.4.1 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Python bindings for OpenBabel (including Pybel)
-EAPI=6
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=python_targets_python3_6
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] ~sci-chemistry/openbabel-2.4.1 sys-libs/zlib
-REQUIRED_USE=|| ( python_targets_python3_6 )
-SLOT=0/5
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.4.1.tar.gz
-_eclasses_=cmake-utils	77cd39e6009811bf97a59d91ffd5b54f	desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=f810f34fb4f2adddc00842933d51ae84
diff --git a/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504 b/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504
index c86bbcb16707..fb9e7d8b89c0 100644
--- a/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504
+++ b/metadata/md5-cache/sci-chemistry/pdbcns-2.0.010504
@@ -1,10 +1,10 @@
 DEFINED_PHASES=install
 DESCRIPTION=Convert atom names for amino acids/nucleic acid bases between PDB and CNS format
-EAPI=4
+EAPI=7
 HOMEPAGE=http://www.mybiosoftware.com/3d-molecular-model/314/
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=BSD
 RDEPEND=dev-lang/perl
 SLOT=0
 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pdbcns.2.0.010504.perl.tgz
-_md5_=89c30d46542bd1560e7c844043f6096c
+_md5_=9669f43dda29a05bc25c0005528fd5db
diff --git a/metadata/md5-cache/sci-chemistry/probe-2.13.110909 b/metadata/md5-cache/sci-chemistry/probe-2.13.110909
index f62cbe3e93c8..fcd04ce7dcf6 100644
--- a/metadata/md5-cache/sci-chemistry/probe-2.13.110909
+++ b/metadata/md5-cache/sci-chemistry/probe-2.13.110909
@@ -1,11 +1,11 @@
-DEFINED_PHASES=install prepare
-DEPEND=app-arch/unzip
+BDEPEND=app-arch/unzip
+DEFINED_PHASES=configure install
 DESCRIPTION=Evaluates atomic packing within or between molecules
-EAPI=4
+EAPI=7
 HOMEPAGE=http://kinemage.biochem.duke.edu/software/probe.php
 KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos
 LICENSE=richardson
 SLOT=0
 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/probe/probe.2.13.110909.src.zip
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multilib	98584e405e2b0264d37e8f728327fed1	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wrapper	4251d4c84c25f59094fd557e0063a974
-_md5_=0a6ad068c88c168f03f956d66a0dae2b
+_eclasses_=multilib	98584e405e2b0264d37e8f728327fed1	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=d85eda6555d4f769d637647a6d0126f6
diff --git a/metadata/md5-cache/sci-chemistry/propka-3.2.0 b/metadata/md5-cache/sci-chemistry/propka-3.2.0
index 28a3c4cabdec..5b89711f850e 100644
--- a/metadata/md5-cache/sci-chemistry/propka-3.2.0
+++ b/metadata/md5-cache/sci-chemistry/propka-3.2.0
@@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=mirror://pypi/p/propka/propka-3.2.0.tar.gz
-_eclasses_=distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_eclasses_=distutils-r1	409cd1220f9f980d21980293a50e2a8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
 _md5_=bd048f5978b21207dd0a67d80964171d
diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.3.0-r3 b/metadata/md5-cache/sci-chemistry/pymol-2.3.0-r3
index f062b4e63306..eedbf36f4503 100644
--- a/metadata/md5-cache/sci-chemistry/pymol-2.3.0-r3
+++ b/metadata/md5-cache/sci-chemistry/pymol-2.3.0-r3
@@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targe
 RESTRICT=mirror
 SLOT=0
 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/pymol-1.8.4.0.png.xz https://github.com/schrodinger/pymol-open-source/archive/v2.3.0.tar.gz -> pymol-2.3.0.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	eb92d1a6d9057e2422cc9610f79f919c	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	optfeature	6c9aa35fc16df43d7142ef2660e00e25	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	409cd1220f9f980d21980293a50e2a8e	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multibuild	b2c915190b051f55a23b9354b9849847	multilib	98584e405e2b0264d37e8f728327fed1	multiprocessing	cac3169468f893670dac3e7cb940e045	optfeature	6c9aa35fc16df43d7142ef2660e00e25	python-r1	8d03325e7e3cf3e1465d9c32031e2517	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
 _md5_=203d30efebadd29522ae0f258a656788
diff --git a/metadata/md5-cache/sci-chemistry/raster3d-3.0.2 b/metadata/md5-cache/sci-chemistry/raster3d-3.0.2
deleted file mode 100644
index 0a9765c3b911..000000000000
--- a/metadata/md5-cache/sci-chemistry/raster3d-3.0.2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare setup
-DEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-DESCRIPTION=Generation high quality raster images of proteins or other molecules
-EAPI=4
-HOMEPAGE=http://www.bmsc.washington.edu/raster3d/raster3d.html
-IUSE=gd tiff
-KEYWORDS=amd64 ppc x86 ~amd64-linux ~x86-linux
-LICENSE=Artistic-2
-RDEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-SLOT=0
-SRC_URI=http://www.bmsc.washington.edu/raster3d/Raster3D_3.0-2.tar.gz -> Raster3D_3.0-2.tar
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	fortran-2	b4796813ccda91c9c0d3463fc90aa969	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multilib	98584e405e2b0264d37e8f728327fed1	prefix	c2993e4c430c1ee24f278983d6189501	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748	wrapper	4251d4c84c25f59094fd557e0063a974
-_md5_=a59b1e92082f2d173671dfd85c99cf41
diff --git a/metadata/md5-cache/sci-chemistry/raster3d-3.0.3 b/metadata/md5-cache/sci-chemistry/raster3d-3.0.3
deleted file mode 100644
index 05d8577d7ce7..000000000000
--- a/metadata/md5-cache/sci-chemistry/raster3d-3.0.3
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare setup
-DEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-DESCRIPTION=Generation high quality raster images of proteins or other molecules
-EAPI=5
-HOMEPAGE=http://www.bmsc.washington.edu/raster3d/raster3d.html
-IUSE=gd tiff
-KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux
-LICENSE=Artistic-2
-RDEPEND=tiff? ( media-libs/tiff:0 ) gd? ( media-libs/gd[jpeg,png] ) virtual/fortran
-SLOT=0
-SRC_URI=http://www.bmsc.washington.edu/raster3d/Raster3D_3.0-3.tar.gz -> Raster3D_3.0-3.tar
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	fortran-2	b4796813ccda91c9c0d3463fc90aa969	l10n	8cdd85e169b835d518bc2fd59f780d8e	ltprune	db8b7ce9d0e663594bcb4a4e72131a79	multilib	98584e405e2b0264d37e8f728327fed1	prefix	c2993e4c430c1ee24f278983d6189501	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748	wrapper	4251d4c84c25f59094fd557e0063a974
-_md5_=342cdfa3f027929bf6f5b74156fe7c8e
diff --git a/metadata/md5-cache/sci-chemistry/raster3d-3.0.6 b/metadata/md5-cache/sci-chemistry/raster3d-3.0.6
new file mode 100644
index 000000000000..f813e2c2785f
--- /dev/null
+++ b/metadata/md5-cache/sci-chemistry/raster3d-3.0.6
@@ -0,0 +1,13 @@
+DEFINED_PHASES=compile install postinst prepare setup
+DEPEND=gd? ( media-libs/gd[jpeg,png] ) tiff? ( media-libs/tiff:0 ) virtual/fortran
+DESCRIPTION=Generation high quality raster images of proteins or other molecules
+EAPI=7
+HOMEPAGE=http://www.bmsc.washington.edu/raster3d/raster3d.html
+IUSE=gd tiff
+KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux
+LICENSE=Artistic-2
+RDEPEND=gd? ( media-libs/gd[jpeg,png] ) tiff? ( media-libs/tiff:0 ) virtual/fortran
+SLOT=0
+SRC_URI=http://www.bmsc.washington.edu/raster3d/Raster3D_3.0-6.tar.gz -> Raster3D_3.0-6.tar
+_eclasses_=edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	fortran-2	b4796813ccda91c9c0d3463fc90aa969	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	prefix	c2993e4c430c1ee24f278983d6189501	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974
+_md5_=9be75cc0fea7287e4d0805dc7c90da7f
diff --git a/metadata/md5-cache/sci-chemistry/suitename-0.3.070628 b/metadata/md5-cache/sci-chemistry/suitename-0.3.070628
index 8b5c194b1247..149b4ec4aa80 100644
--- a/metadata/md5-cache/sci-chemistry/suitename-0.3.070628
+++ b/metadata/md5-cache/sci-chemistry/suitename-0.3.070628
@@ -1,10 +1,10 @@
-DEFINED_PHASES=compile install prepare
+DEFINED_PHASES=compile configure install
 DESCRIPTION=The ROC RNA Ontology nomenclature and conformer-list development
-EAPI=4
+EAPI=7
 HOMEPAGE=http://kinemage.biochem.duke.edu/software/suitename.php
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=richardson
 SLOT=0
 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/suitename/suitename.0.3.070628.src.tgz
 _eclasses_=multilib	98584e405e2b0264d37e8f728327fed1	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=23e3046482e340a86f5452a8901c8c44
+_md5_=33cf8423353d46b4e660655c6d0743c1
diff --git a/metadata/md5-cache/sci-chemistry/surf-1.0 b/metadata/md5-cache/sci-chemistry/surf-1.0
index 2820e1c405d4..ffe814333aa0 100644
--- a/metadata/md5-cache/sci-chemistry/surf-1.0
+++ b/metadata/md5-cache/sci-chemistry/surf-1.0
@@ -1,11 +1,11 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=!www-client/surf sys-apps/ed x11-misc/makedepend
+DEFINED_PHASES=configure install
 DESCRIPTION=Solvent accesible Surface calculator
-EAPI=4
+EAPI=7
 HOMEPAGE=http://www.ks.uiuc.edu/
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos
 LICENSE=SURF
+RDEPEND=!www-client/surf
 SLOT=0
 SRC_URI=http://www.ks.uiuc.edu/Research/vmd/extsrcs/surf.tar.Z -> surf-1.0.tar.Z
 _eclasses_=multilib	98584e405e2b0264d37e8f728327fed1	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=9e457a60ca1a2aa1dc6e1838ffc04c34
+_md5_=da03602df9308e7ea82ef3125d2e970b
diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.3-r5 b/metadata/md5-cache/sci-chemistry/vmd-1.9.3-r5
deleted file mode 100644
index b65d7fc42c9e..000000000000
--- a/metadata/md5-cache/sci-chemistry/vmd-1.9.3-r5
+++ /dev/null
@@ -1,16 +0,0 @@
-BDEPEND=virtual/pkgconfig dev-lang/swig
-DEFINED_PHASES=compile configure install nofetch postinst postrm preinst prepare setup
-DEPEND=>=dev-lang/tk-8.6.1:0= dev-lang/perl dev-libs/expat python_single_target_python2_7? ( || ( dev-python/numpy-python2[python_targets_python2_7(-)] dev-python/numpy[python_targets_python2_7(-)] ) ) sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7] ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1:0=[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) dev-util/desktop-file-utils x11-misc/shared-mime-info
-DESCRIPTION=Visual Molecular Dynamics
-EAPI=7
-HOMEPAGE=http://www.ks.uiuc.edu/Research/vmd/
-IUSE=cuda gromacs msms povray sqlite tachyon xinerama +python_single_target_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=vmd
-RDEPEND=>=dev-lang/tk-8.6.1:0= dev-lang/perl dev-libs/expat python_single_target_python2_7? ( || ( dev-python/numpy-python2[python_targets_python2_7(-)] dev-python/numpy[python_targets_python2_7(-)] ) ) sci-libs/netcdf:0= virtual/opengl >=x11-libs/fltk-1.1.10-r2:1 x11-libs/libXft x11-libs/libXi python_single_target_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7] ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1:= ) gromacs? ( >=sci-chemistry/gromacs-5.0.4-r1:0=[tng] ) sqlite? ( dev-db/sqlite:3= ) tachyon? ( >=media-gfx/tachyon-0.99_beta6 ) xinerama? ( x11-libs/libXinerama ) sci-biology/stride sci-chemistry/chemical-mime-data sci-chemistry/surf x11-terms/xterm msms? ( sci-chemistry/msms-bin ) povray? ( media-gfx/povray )
-REQUIRED_USE=^^ ( python_single_target_python2_7 )
-RESTRICT=fetch
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/vmd-1.9.3-gentoo-patches.tar.xz vmd-1.9.3.src.tar
-_eclasses_=cuda	c2f1b334711bbbf2130f339636dc7515	desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	prefix	c2993e4c430c1ee24f278983d6189501	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg	c7ba313ea1eaf266f95cc6235f7d6a07	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=33312b23eaf04a2d5f4b4303f115803a
diff --git a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha43 b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha43
index 3282d9f8442d..7f99818f5ca6 100644
--- a/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha43
+++ b/metadata/md5-cache/sci-chemistry/vmd-1.9.4_alpha43
@@ -12,5 +12,5 @@ REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7
 RESTRICT=fetch
 SLOT=0
 SRC_URI=vmd-1.9.4a43.src.tar https://dev.gentoo.org/~jlec/distfiles/vmd-1.9.3-gentoo-patches.tar.xz
-_eclasses_=cuda	c2f1b334711bbbf2130f339636dc7515	desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	prefix	c2993e4c430c1ee24f278983d6189501	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	bae936266b68e0c374a74f2b0d0aaa44	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg	c7ba313ea1eaf266f95cc6235f7d6a07	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=bdf4c1b5b7673f5523933532d408a96c
+_eclasses_=cuda	c2f1b334711bbbf2130f339636dc7515	desktop	7fd20552ce4cc97e8acb132a499a7dd8	edos2unix	33e347e171066657f91f8b0c72ec8773	eutils	2d5b3f4b315094768576b6799e4f926e	flag-o-matic	09a8beb8e6a8e02dc1e1bd83ac353741	l10n	8cdd85e169b835d518bc2fd59f780d8e	multilib	98584e405e2b0264d37e8f728327fed1	prefix	c2993e4c430c1ee24f278983d6189501	python-single-r1	d3100de905f978df912135806cf27188	python-utils-r1	e41e32d357e5bdd388b5be2ce24f3883	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	wrapper	4251d4c84c25f59094fd557e0063a974	xdg	c7ba313ea1eaf266f95cc6235f7d6a07	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
+_md5_=96ed023f719b882f2b147e8f9a8f96e9
author	V3n3RiX <venerix@redcorelinux.org>	2020-09-23 10:22:15 +0100
committer	V3n3RiX <venerix@redcorelinux.org>	2020-09-23 10:22:15 +0100
commit	8b4ace9c50842c5b83401ea7b179dcab940387e1 (patch)
tree	230f3135ceaace633cf93e9838b185c4a6664c2e /metadata/md5-cache/sci-chemistry
parent	9ee6d97c2883d42f204a533a8bc1f4562df778fb (diff)