diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2018-05-17 22:49:47 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2018-05-17 22:49:47 +0100 |
| commit | 30c53e395853f5bfe805a1e429fcf26666eed8f8 (patch) | |
| tree | a0670eaf9babda7b83503f7d36806a944bb49752 /metadata/md5-cache/sci-biology | |
| parent | d302a5d7fc9caafba5c8a404f2891bb6ccdec311 (diff) | |
gentoo resync : 17.05.2018
Diffstat (limited to 'metadata/md5-cache/sci-biology')
53 files changed, 51 insertions, 65 deletions
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex 90a75976c7fe..5dcc613041f7 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 index 9e349f0c78b7..f8c2f2f8128b 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 @@ -9,5 +9,5 @@ LICENSE=abyss RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi ) SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.2.tar.gz -> abyss-2.0.2.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=3b173739bd4e2f9d61a49918b3b8bc05 diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3 b/metadata/md5-cache/sci-biology/abyss-2.0.3 index ee438a042b31..efa56cb4d874 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.3 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.3 @@ -9,5 +9,5 @@ LICENSE=abyss RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virtual/libffi:0= ) mpi? ( sys-cluster/openmpi ) SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=4c70cbdf60d5dc2d564272b103f2b469 diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 index 570ae485f090..6e9ee1e0c28f 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 +++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=!sci-biology/allpaths !sci-biology/vaal SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz https://dev.gentoo.org/~mgorny/dist/allpathslg-52488-patchset.tar.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=8c8bda5ab2704db1e969660ebe5882c1 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 index 439b6a48ed15..3fdd7be291a8 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r4 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r4 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=aec6d1c76d5ea621c66e803800e2b3c4 diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index f48bf60face8..c53b4975fe4e 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-perl/XML-Simple SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=abc362f15c5107d96bedfb879ea0375f diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index b3ed7c62ad82..dd0d782a7d0a 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 deleted file mode 100644 index e30cde012868..000000000000 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ /dev/null @@ -1,14 +0,0 @@ -DEFINED_PHASES=compile configure install prepare test -DEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] dev-python/pandas[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] dev-python/setuptools[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] test? ( dev-python/nose[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] ) python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] -DESCRIPTION=Molecular Structures in Pandas DataFrames -EAPI=5 -HOMEPAGE=https://rasbt.github.io/biopandas/ https://github.com/rasbt/biopandas https://pypi.org/project/BioPandas/ -IUSE=test python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=BSD -RDEPEND=dev-python/numpy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] dev-python/pandas[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] sci-libs/scipy[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) python_targets_python3_5? ( dev-lang/python:3.5 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,python_targets_python3_5(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-)] -REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targets_python3_5 ) -SLOT=0 -SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz -_eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 -_md5_=0cd8b2ce25811b0d0249bc4c771daa24 diff --git a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 index 684d1047356c..fdf2a616893c 100644 --- a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 +++ b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/gsl:= dev-libs/boost:= sci-biology/snpfile SLOT=0 SRC_URI=http://www.daimi.au.dk/~mailund/Blossoc/download/blossoc-1.4.0.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=2fe1853c7621b633d2ee794ef3176e3f diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index b21cd56de6f5..b4c78a323d2a 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=9ade45d2e283bc5fcc7eef16725e18ae diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index 0fa8f72dfb38..e39968a9ea1b 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.62.0:= python_targets REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=816b8cb2b88b4938d0bf5ea1db34170b diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index 2b5110c56feb..e4f54ac6f22d 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=4166ba28131fdf70907b31300aa4c08b diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index bd879d61f4ae..751c1c5a1a69 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=ef491b452e56be12961f62b16961f4f1 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index a9b36cb4b74f..552b5b100a94 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index d0e274857905..cb893eaeb9e1 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=9f8b2caa273f4ae3b0463e6de6782660 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index 0f76d35d5a1c..f5c3aa64555d 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=920906439fbc5278460201b23a615736 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index b5772e1fe30f..1b8469fe9efb 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=d82c7c44ec76fa5d6165769a73e5df9a diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index c01958b70c12..21699ca64f48 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=1b156bed7ea031aeb5464836dd987f18 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index d6867211f30b..60728a9d91f3 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=83d02ae22d4e1864669639d9289cd112 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index c573e86da9c1..0d83a7cc4777 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=73b0c29964ea3506d18ef6b6c8df70e1 diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 index 6ca94d2a509c..61ad048f4dc0 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=b18db6d7a2159272c7b69d34a14dc9b5 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index 863cf016f2b8..c7b639627ae1 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=84df94b7c4b0f044de45cef524cbf453 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index 2d48594d2832..85f01f68b52c 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 freedist RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=00620d36fbf4790dc2ecfb240ba9816c diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index 435d087cd8cf..b4f314cb2f7b 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=4cb685046b5a39b624eb3467b815c2c4 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index e0133be542a2..0aeb5d1d2edb 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=634d624be78f958ed7fca02e7dc43bd4 diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index a7332a38b37c..5780436e7c4c 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=e50220ee11093554b589c1f9f53e7c09 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index 3ca7342144bb..aad0049ae044 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -9,5 +9,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,static-libs=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=d257de40bcdb33c0735daac8a5f15fda diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index 61885f9df3fa..ad8093521d8a 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -10,5 +10,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( virtual/mysql ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=99a47266a2a8f2fd0a874111491146e2 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 796988cf33d7..eebe341cb911 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=683d1e7f9daeda6cd20b92117330ea81 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index 0a379c6cf139..4e2c58a7cc67 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/glib:2 REQUIRED_USE=test? ( utils ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=2efd53d13e6f08e4144477038f41e4af diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 index a80dd2c3b7d2..e871bd03850f 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 @@ -8,5 +8,5 @@ LICENSE=AGPL-3 RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=c3bb0edd6b01a31019cf5fd59e22122a diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index d5b4a2f0dc61..3291e4d37bd3 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=e28918ff8ca46c8b8254e4e36f8d0bcf diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 index c12aae084b9e..ead875e356b7 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=62b1fc794a90a87e0f80ab795108ee3c diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 index 07d8de9ea609..928a9b19ba03 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=2599766d541e65f4acfb94c4fa4e974e diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 index 693ee66362b7..b4eb3bd9c6f9 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip https://dev.gentoo.org/~mgorny/dist/goby-cpp-2.0.1-files.tar.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=8282c100b202c470aedc98e37f6151ff diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index 08e66eddb9bc..6fc554f27341 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 index 72cd6665cc76..59b87bd55635 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=867c9b9e4eee26ad2a76ff6ff0594f52 diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index 8f274d07f5ae..d5c5efbeb421 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index 892df2fe82ea..68bae6adc1c2 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312 index 784e56c4c15e..8af25333c398 100644 --- a/metadata/md5-cache/sci-biology/mcl-08.312 +++ b/metadata/md5-cache/sci-biology/mcl-08.312 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135 index 0afacf0ef869..f88626e2df00 100644 --- a/metadata/md5-cache/sci-biology/mcl-12.135 +++ b/metadata/md5-cache/sci-biology/mcl-12.135 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index abe2da879da1..7861dc14fd3f 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=3429c68609b6c70e047d577379f68f97 diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index a1b5279315ad..1ee69516539b 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec versionator 26ca8a8bd95d6a74122c08ba98a4ee72 +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 estack 43ddf5aaffa7a8d0482df54d25a66a1f libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec versionator 26ca8a8bd95d6a74122c08ba98a4ee72 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index 159ef61c7035..62fb146a18c9 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=4e9fc8a550640febbc0b71544c16618c diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5 index 2116111b822c..c26484847126 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.5 +++ b/metadata/md5-cache/sci-biology/samtools-1.5 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib py REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=8d92b4a814f62eab87bac2be22c2470c diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 index bbd106f175f8..122f54b8456e 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=dev-libs/boost:= SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=7c64014825a157024d03614c037abcfc diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 index 203e1f27baee..df871ec9b96a 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 @@ -10,5 +10,5 @@ RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=efee8069c83c578acac8e57b429ad985 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 9e5334023285..024ea92a9fe1 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets 04e063b0eff26daaea83d859dd9d6e05 +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wxwidgets 04e063b0eff26daaea83d859dd9d6e05 _md5_=ce129f3e61a849cfd3654e5a9fa4b17a diff --git a/metadata/md5-cache/sci-biology/vaal-46233-r2 b/metadata/md5-cache/sci-biology/vaal-46233-r2 index 9bff32ce95b5..47a7627d4194 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233-r2 +++ b/metadata/md5-cache/sci-biology/vaal-46233-r2 @@ -9,5 +9,5 @@ LICENSE=Whitehead-MIT RDEPEND=!sci-biology/allpaths !sci-biology/allpathslg SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc https://dev.gentoo.org/~mgorny/dist/vaal-46233_remove-namespace-std.patch.bz2 -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=7ca22b906d6f7e7c4fe2f2f35eedfb6b diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 2c8ad6664dff..e2d3c8846b40 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs fa02994d0beba88681127d93da4411ec vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf _md5_=c40169dc993f3444a3e2f41ad69a920d diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index 2c7f660ed5c5..f4722d360cc8 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=1e58c830b49ced05ae9960fcc2dead13 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index ed1e33f4a54b..1f4615893231 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? ( REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 distutils-r1 63fea93ca1cc4fdc5fa2247afc4e3a15 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 63392afb034aad67f17fa129019eb4d9 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multibuild 35719a9cd25ec71ee49c966f6868454c multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 c66af00ffb980e8eb1c961d5e63597fe python-utils-r1 3b2e27bcad216823f5a67d01d28b53a4 toolchain-funcs fa02994d0beba88681127d93da4411ec unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils f2c8335407f0b935b0a96d4adf23ef25 _md5_=b2a6486af275e75c6365ab7eeba1e0bd diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index 46b1739bbcc5..c74965c4b235 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools 02d4d2fc8dba08b060de8f3afd46b409 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 libtool 0081a71a261724730ec4c248494f044d multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs fa02994d0beba88681127d93da4411ec _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |