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authorV3n3RiX <venerix@redcorelinux.org>2018-08-29 20:19:23 +0100
committerV3n3RiX <venerix@redcorelinux.org>2018-08-29 20:19:23 +0100
commit12bb627384ddfd47382b9f1b6464481a58d01ebb (patch)
treef9760c04ccd4fcd7de214e2acd5b0e43fb530aa9 /metadata/md5-cache/sci-biology
parent5fdd950c7ae03e12746a45c86d85861beaacc846 (diff)
gentoo resync : 29.08.2018
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/GBrowse-2.48-r12
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin33299 -> 33280 bytes
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-db-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-network-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-1.6.92
-rw-r--r--metadata/md5-cache/sci-biology/bioperl-run-9999-r12
-rw-r--r--metadata/md5-cache/sci-biology/diya-1.0_rc42
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.2.14
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.34
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.44
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.54
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.12
-rw-r--r--metadata/md5-cache/sci-biology/vienna-rna-2.1.82
17 files changed, 20 insertions, 20 deletions
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
index 44cfea872b80..1303e23aa18b 100644
--- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
+++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15
SLOT=0
SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 6ae2395d7f341093c36057cb4f69101a
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 6ae2395d7f341093c36057cb4f69101a
_md5_=bccaeef3292f6df307fc14fb5a2a74b2
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index 38fd6b1efa40..9fa97404317f 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9
index 188756d8169b..58d2f35ad019 100644
--- a/metadata/md5-cache/sci-biology/bioperl-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9
@@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr
REQUIRED_USE=minimal? ( !graphviz )
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=be22a76392a6e5c121e4b6d388045faa
diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1
index d50f5cc9ba17..7471ce3b99b2 100644
--- a/metadata/md5-cache/sci-biology/bioperl-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1
@@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2
PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-db-9999 ) network? ( >=sci-biology/bioperl-network-9999 ) run? ( >=sci-biology/bioperl-run-9999 )
RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=210415961127105f0fc625670ba9e423
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
index ebaf81761070..67b46162f431 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=2470d7ecf1b6ff1902a8d74057748480
diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
index 409b2c6cbf4e..00eb4cbc16f7 100644
--- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1
@@ -6,5 +6,5 @@ HOMEPAGE=http://www.bioperl.org/
LICENSE=Artistic GPL-2
RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=fd4229be06b3975302e9e37ca35601d2
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
index d914e3de3f4a..1ca1712d2b94 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9
@@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ )
RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=cb366a6a0c6cf3c12320c2d6d3551abe
diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
index 37da1997a770..76a0fe9424d6 100644
--- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1
@@ -7,5 +7,5 @@ IUSE=test
LICENSE=Artistic GPL-2
RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)]
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=025cd5fa89be402f3296160dbf755c8b
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
index a01c493702d3..48a4c7e6b806 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
+++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9
@@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl
RESTRICT=test
SLOT=0
SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=9caec4e5b47cbf306a1689903f2a018a
diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
index e6f56b1a7367..60936f3bc3ae 100644
--- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
+++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1
@@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2
RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/XML-Twig dev-perl/IO-String dev-perl/IPC-Run ) dev-lang/perl:=[-build(-)]
RESTRICT=test
SLOT=0
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 git-2 249c1a0962573f4ce2c28f0d5b6b35d4 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=26abe4f8477c1a1c22bd8515484ce1c1
diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4
index 8f3f0c51091e..33b004ed76f1 100644
--- a/metadata/md5-cache/sci-biology/diya-1.0_rc4
+++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal? ( sci-biology/mummer sci-biology/glimmer sci-biology/trnascan-se sci-biology/infernal ) dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz
-_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
+_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf
_md5_=5d4639d7c08c43e2c2208492508fd56c
diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1
index 0cf0c5e6d4ab..421082c783ef 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.2.1
+++ b/metadata/md5-cache/sci-biology/psipred-3.2.1
@@ -5,8 +5,8 @@ HOMEPAGE=http://bioinf.cs.ucl.ac.uk/psipred/
IUSE=test
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=psipred
-RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
+RDEPEND=sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz
_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
-_md5_=bf7aa50ff789d669fe4846e0e41828d7
+_md5_=3bfa6c8db72c665ebd3da2fcad0fa1b5
diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3
index fde7cfe072d2..21920ca1f4e1 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.3
+++ b/metadata/md5-cache/sci-biology/psipred-3.3
@@ -5,8 +5,8 @@ HOMEPAGE=http://bioinf.cs.ucl.ac.uk/psipred/
IUSE=test
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=psipred
-RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
+RDEPEND=sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
-_md5_=d719359ecbbd5c0825e93788cc4f0af1
+_md5_=26211f9b01966485ec2f6d801b58e61b
diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4
index 1d4faa021692..0712212c59d7 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.4
+++ b/metadata/md5-cache/sci-biology/psipred-3.4
@@ -5,8 +5,8 @@ HOMEPAGE=http://bioinf.cs.ucl.ac.uk/psipred/
IUSE=test
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=psipred
-RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
+RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
-_md5_=671e20dbd509ebdd9e9c492e2c53b6a1
+_md5_=aa07fe12602b4a284c9d8734857542e5
diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5
index c58906200155..058d224afc7d 100644
--- a/metadata/md5-cache/sci-biology/psipred-3.5
+++ b/metadata/md5-cache/sci-biology/psipred-3.5
@@ -5,8 +5,8 @@ HOMEPAGE=http://bioinf.cs.ucl.ac.uk/psipred/
IUSE=test
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=psipred
-RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
+RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
SLOT=0
SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
_eclasses_=desktop b1d22ac8bdd4679ab79c71aca235009d epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf versionator 2352c3fc97241f6a02042773c8287748
-_md5_=671e20dbd509ebdd9e9c492e2c53b6a1
+_md5_=aa07fe12602b4a284c9d8734857542e5
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
index d93f9accdb8f..42829283aa95 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz
-_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 8595c9c7530ac3963f3aa0d77aa7e2d8 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool 0081a71a261724730ec4c248494f044d ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multibuild 40fe59465edacd730c644ec2bc197809 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 12114a2a9aab35b93efc037a196b3234 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 89bb9f083a2590d9b447fd0b78a96186
+_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 8595c9c7530ac3963f3aa0d77aa7e2d8 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool 0081a71a261724730ec4c248494f044d ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multibuild 40fe59465edacd730c644ec2bc197809 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 12114a2a9aab35b93efc037a196b3234 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 89bb9f083a2590d9b447fd0b78a96186
_md5_=1e58c830b49ced05ae9960fcc2dead13
diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
index fec46bce11ca..cf6a11ad772f 100644
--- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
+++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8
@@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl media-libs/gd doc? ( dev-texlive/texlive-latex ) python? (
REQUIRED_USE=python? ( || ( python_targets_python2_7 ) )
SLOT=0
SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz
-_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 8595c9c7530ac3963f3aa0d77aa7e2d8 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool 0081a71a261724730ec4c248494f044d ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multibuild 40fe59465edacd730c644ec2bc197809 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 12114a2a9aab35b93efc037a196b3234 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker 87633b2194cdb56adaa1f5a5c8862c44 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 89bb9f083a2590d9b447fd0b78a96186
+_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 autotools-utils 696393cddf6200db17a31641f597b403 desktop b1d22ac8bdd4679ab79c71aca235009d distutils-r1 8595c9c7530ac3963f3aa0d77aa7e2d8 epatch a1bf4756dba418a7238f3be0cb010c54 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 6e6c2737b59a4b982de6fb3ecefd87f8 libtool 0081a71a261724730ec4c248494f044d ltprune 08f9e1d9ee0af8f5d9a7854efbcd8c0e multibuild 40fe59465edacd730c644ec2bc197809 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f2e3420aed32cf1abe33b4129b842636 perl-module ee5593d6e2d067fafac171106655b5ce preserve-libs ef207dc62baddfddfd39a164d9797648 python-r1 ce1cd23cfdc1848e8e32743efe34f299 python-utils-r1 12114a2a9aab35b93efc037a196b3234 toolchain-funcs e4a9360924c5ce9f52e61342cde58512 unpacker ee2f5086cd7e7b747b061f58db14d89e vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf xdg-utils 89bb9f083a2590d9b447fd0b78a96186
_md5_=b2a6486af275e75c6365ab7eeba1e0bd