gentoo resync : 14.07.2018

7 files changed, 0 insertions, 192 deletions

diff --git a/dev-python/montage-wrapper/Manifest b/dev-python/montage-wrapper/Manifest
deleted file mode 100644
index 36de7286a043..000000000000
--- a/dev-python/montage-wrapper/Manifest
+++ /dev/null
@@ -1,8 +0,0 @@
-AUX montage-wrapper-0.9.8-fix_tests.patch 2291 BLAKE2B 0b5f121acda42c76341b52c52e88fd551021730b89af2239e03a06aaa4c7756624068a5dd71e8e87a921c9661454f1cfc36f839a1ca49b6e1e85614aa4406cb5 SHA512 1466905009a5dadd1f6cf95ab4b97384d2332cac850f61f8766dc7a9b07454fa1c3840e9b5720325db515e36ee8c321610a7ae1c5c24c0272f2f5fe25eafe226
-AUX montage-wrapper-0.9.8-increase_rtol.patch 872 BLAKE2B 7ec522c84cfc987ffe1dba6d893849ab2ccc109e2d8f800c47361108b10ef5dd8b725aaa08522975ef5cea6e82fc6b7f2822dbb5d776ea0f582bd9eecc8ff3a9 SHA512 221f0549abef1a1a7a5d2a6edc47da96c54fecd0fe3d4a762153309523731194bb9254fa352ca88eaa13e0cabeae2913ca5313b2dc4feaba705a9af6df92ff12
-AUX montage-wrapper-0.9.8-use_configparser.patch 533 BLAKE2B c39cd970eae5063c60727d0f35661f5b877ae72ed527d6c28c657f886248c6d4c3e1af4ef87eb73f6a4915746d8a69eedf249e7aec2216235a33af40a173c9b3 SHA512 ed81511da9665429ffbcf2424db7aefa63f0f0a93932380c3685d90918b30a45970f658a8ef69d860c23f216da473884c816b56ffa49d763a620fabf2997c042
-DIST montage-wrapper-0.9.8.tar.gz 208240 BLAKE2B 697eb310207cdf760f1d2ae23a840717817e85ff118886d475c73787aed4a4b644f5ab70d551686a4a746af001321846af76b9c7911ddd24943d30bd5afa128e SHA512 a9aeb48f86d055448fdfed3a5c3762b554627db10f1374cbd3f7af6002721ae04e9f47828c2084147be40f79c1c4ce6e56568bf61a6cdd78a31ce91de6365ec1
-DIST montage-wrapper-0.9.9.tar.gz 187490 BLAKE2B 1c7f06e1c168a96b574ce7a65c99aad9482a523b0c6288e8686410fdd4c9102a27cf098ab5e56895888e17147f20d8c5eb0c8785527543757b6a4166a409e4e0 SHA512 a113a9f1ca03ca158ed6d8a4520c6710804a5ac10bae3dd0c0231390f771479c43f0cdd08e302c59ac1d608c4865d4b0d7a3a233ad068d40d3f1c0efbc343533
-EBUILD montage-wrapper-0.9.8.ebuild 1146 BLAKE2B 648245dcc1c5468183373e59ab949a4a11e8e3d5231ba95f8309dbec55d6b69dda7e73c5d225d842e005eccbffab5e91e667387805da6fe2285e736337a0d655 SHA512 53bea7dd0c18f1cc88aaa90f8891de82717fa0f533ec2d2b5dbf612d750c2ec8c9972f36dda791fd74eddf197a4016827dffe89ace9cadb27cbb80daedc1421f
-EBUILD montage-wrapper-0.9.9.ebuild 989 BLAKE2B 909d5d03104f580870d73fa4aeacf4164b3b5c4adab0c72ddd39846355ac367a846b6f762a4cc6ad3d4badc1737b34d2a91cd38252ab06e6d0ba7dddf6e18313 SHA512 4c363a10eb6932ca947501e22132acfd9c92389acc69fdb1c1158c13711cc9c9b1946567428fd2f24ce6a2c3d1b85ee32f3b427f51dde55be6c388561f1166ff
-MISC metadata.xml 640 BLAKE2B 45c551a8657052c12d943a5a6ba3a14755574f7e7b1157f5a237a67e5575f07eb4354d3b310b949d7851a4da43d2fd76d724c14bb5d7a7b2a924e84a1234541c SHA512 ebc6b77919fd327e395610b3479a1bb84b2457cdd08ba850a0e9098b95284705fea84092eeb2322e51686dd8214cd281b681cbc8d28bc0d99068f73ca685cb83
diff --git a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-fix_tests.patch b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-fix_tests.patch
deleted file mode 100644
index 8d611b72f81a..000000000000
--- a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-fix_tests.patch
+++ /dev/null
@@ -1,40 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Make sure that opened FITS files are closed after the test
---- a/montage_wrapper/tests/test_wrappers.py
-+++ b/montage_wrapper/tests/test_wrappers.py
-@@ -46,21 +46,21 @@
- 
-     def test_mosaic(self):
-         mosaic(os.path.join(self.tmpdir, 'raw'),os.path.join(self.tmpdir, 'mosaic'), hdu=0)
--        hdu = fits.open(os.path.join(self.tmpdir, 'mosaic', 'mosaic.fits'))[0]
--        assert hdu.data.shape == (288, 282)
--        valid = hdu.data[~np.isnan(hdu.data)]
--        assert len(valid) == 65029
--        assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
--        assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
--        assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
-+        with fits.open(os.path.join(self.tmpdir, 'mosaic', 'mosaic.fits')) as hdu:
-+            assert hdu[0].data.shape == (288, 282)
-+            valid = hdu[0].data[~np.isnan(hdu[0].data)]
-+            assert len(valid) == 65029
-+            assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
-+            assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
-+            assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
- 
-     @pytest.mark.xfail()  # results are not consistent on different machines
-     def test_mosaic_background_match(self):
-         mosaic(os.path.join(self.tmpdir, 'raw'),os.path.join(self.tmpdir, 'mosaic_bkgmatch'), background_match=True)
--        hdu = fits.open(os.path.join(self.tmpdir, 'mosaic_bkgmatch', 'mosaic.fits'))[0]
--        assert hdu.data.shape == (288, 282)
--        valid = hdu.data[~np.isnan(hdu.data)]
--        assert len(valid) == 65029
--        assert_allclose(np.std(valid), 0.12661606622654725)
--        assert_allclose(np.mean(valid), 0.4994805202294361)
--        assert_allclose(np.median(valid), 0.5002447366714478)
-+        with fits.open(os.path.join(self.tmpdir, 'mosaic_bkgmatch', 'mosaic.fits')) as hdu:
-+            assert hdu[0].data.shape == (288, 282)
-+            valid = hdu[0].data[~np.isnan(hdu[0].data)]
-+            assert len(valid) == 65029
-+            assert_allclose(np.std(valid), 0.12661606622654725)
-+            assert_allclose(np.mean(valid), 0.4994805202294361)
-+            assert_allclose(np.median(valid), 0.5002447366714478)
diff --git a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-increase_rtol.patch b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-increase_rtol.patch
deleted file mode 100644
index 285b525a4df5..000000000000
--- a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-increase_rtol.patch
+++ /dev/null
@@ -1,17 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Increase rtol of asserts to let the tests succeed with montage-4.0
---- a/montage_wrapper/tests/test_wrappers.py
-+++ b/montage_wrapper/tests/test_wrappers.py
-@@ -50,9 +50,9 @@
-         assert hdu.data.shape == (288, 282)
-         valid = hdu.data[~np.isnan(hdu.data)]
-         assert len(valid) == 65029
--        assert_allclose(np.std(valid), 0.12658458001333581)
--        assert_allclose(np.mean(valid), 0.4995945318627074)
--        assert_allclose(np.median(valid), 0.5003376603126526)
-+        assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
-+        assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
-+        assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
- 
-     @pytest.mark.xfail()  # results are not consistent on different machines
-     def test_mosaic_background_match(self):
diff --git a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-use_configparser.patch b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-use_configparser.patch
deleted file mode 100644
index 082c3678e125..000000000000
--- a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-use_configparser.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Author: Vincent Prat <vinceprat@free.fr>
-Description: Use ConfigParser module instead of the one embedded in distutils.config
---- a/setup.py
-+++ b/setup.py
-@@ -21,8 +21,11 @@
- from astropy_helpers.version_helpers import generate_version_py
- 
- # Get some values from the setup.cfg
--from distutils import config
--conf = config.ConfigParser()
-+try:
-+    from configparser import ConfigParser
-+except:
-+    from ConfigParser import ConfigParser
-+conf = ConfigParser()
- conf.read(['setup.cfg'])
- metadata = dict(conf.items('metadata'))
- 
diff --git a/dev-python/montage-wrapper/metadata.xml b/dev-python/montage-wrapper/metadata.xml
deleted file mode 100644
index aa3e481c13e8..000000000000
--- a/dev-python/montage-wrapper/metadata.xml
+++ /dev/null
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-  <maintainer type="project">
-    <email>sci-astronomy@gentoo.org</email>
-    <name>Gentoo Astronomy Project</name>
-  </maintainer>
-  <longdescription>
-  This Astropy-affiliated package provides a python wrapper to the
-  Montage Astronomical Image Mosaic Engine, including both functions to
-  access individual Montage commands, and high-level functions to
-  facilitate mosaicking and re-projecting.
-</longdescription>
-  <upstream>
-    <remote-id type="pypi">montage-wrapper</remote-id>
-  </upstream>
-</pkgmetadata>
diff --git a/dev-python/montage-wrapper/montage-wrapper-0.9.8.ebuild b/dev-python/montage-wrapper/montage-wrapper-0.9.8.ebuild
deleted file mode 100644
index 4dfca3796e6c..000000000000
--- a/dev-python/montage-wrapper/montage-wrapper-0.9.8.ebuild
+++ /dev/null
@@ -1,50 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_4,3_5} )
-
-inherit distutils-r1
-
-DESCRIPTION="Python wrapper for the Montage mosaicking toolkit"
-HOMEPAGE="http://www.astropy.org/montage-wrapper/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc test"
-
-RDEPEND="
-	dev-python/astropy[${PYTHON_USEDEP}]
-	sci-astronomy/montage"
-DEPEND="
-	dev-python/astropy[${PYTHON_USEDEP}]
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? ( sci-astronomy/montage )"
-
-PATCHES=(
-	"${FILESDIR}/${P}-increase_rtol.patch"
-	"${FILESDIR}/${P}-fix_tests.patch"
-	"${FILESDIR}/${P}-use_configparser.patch"
-)
-
-python_prepare_all() {
-	# use system astropy-helpers instead of bundled one
-	sed -i -e '/auto_use/s/True/False/' setup.cfg || die
-	distutils-r1_python_prepare_all
-}
-
-python_compile_all() {
-	use doc && PYTHONPATH=".." emake -C docs html
-}
-
-python_test() {
-	${EPYTHON} setup.py test
-}
-
-python_install_all() {
-	use doc && HTML_DOCS=( docs/_build/html/. )
-	distutils-r1_python_install_all
-}
diff --git a/dev-python/montage-wrapper/montage-wrapper-0.9.9.ebuild b/dev-python/montage-wrapper/montage-wrapper-0.9.9.ebuild
deleted file mode 100644
index 409d24f27653..000000000000
--- a/dev-python/montage-wrapper/montage-wrapper-0.9.9.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
-
-inherit distutils-r1
-
-DESCRIPTION="Python wrapper for the Montage mosaicking toolkit"
-HOMEPAGE="http://www.astropy.org/montage-wrapper/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc test"
-
-RDEPEND="
-	dev-python/astropy[${PYTHON_USEDEP}]
-	sci-astronomy/montage"
-DEPEND="
-	dev-python/astropy[${PYTHON_USEDEP}]
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	test? ( sci-astronomy/montage )"
-
-python_prepare_all() {
-	# use system astropy-helpers instead of bundled one
-	sed -i -e '/auto_use/s/True/False/' setup.cfg || die
-	distutils-r1_python_prepare_all
-}
-
-python_compile_all() {
-	if use doc; then
-		PYTHONPATH=".." emake -C docs html
-		HTML_DOCS=( docs/_build/html/. )
-	fi
-}
-
-python_test() {
-	esetup.py test || die "tests failed with ${EPYTHON}"
-}