From 6a4408b9bbd9fe61dc0966f587db94081fa5f52b Mon Sep 17 00:00:00 2001
From: V3n3RiX <venerix@koprulu.sector>
Date: Wed, 10 Jan 2024 19:03:44 +0000
Subject: gentoo auto-resync : 10:01:2024 - 19:03:44

---
 sci-visualization/Manifest.gz                 | Bin 4863 -> 4870 bytes
 sci-visualization/circos/Manifest             |   2 +
 sci-visualization/circos/circos-0.69.9.ebuild |  55 ++++++++++++++++++++++++++
 3 files changed, 57 insertions(+)
 create mode 100644 sci-visualization/circos/circos-0.69.9.ebuild

(limited to 'sci-visualization')

diff --git a/sci-visualization/Manifest.gz b/sci-visualization/Manifest.gz
index 19bff15dc754..1f35072390bd 100644
Binary files a/sci-visualization/Manifest.gz and b/sci-visualization/Manifest.gz differ
diff --git a/sci-visualization/circos/Manifest b/sci-visualization/circos/Manifest
index f7010231b268..9d224ce558ef 100644
--- a/sci-visualization/circos/Manifest
+++ b/sci-visualization/circos/Manifest
@@ -1,3 +1,5 @@
 DIST circos-0.55.tgz 10163948 BLAKE2B b4dc821e99ea4ea072b6b2819f257eba920b133f4f4a10ddd119b073c067ba80dff1ffa1377d5b888098d25cf2eea8c92879444bd6a493b3743ab869b45f5302 SHA512 3ebad082acd96b27281e6fcd996fb79022d982a93db59e1f3589a341df7f9855d7554fb92c88c41dc4679e7273d11c0372285a4059ec14a77f11d1d4014db9c1
+DIST circos-0.69-9.tgz 29794907 BLAKE2B 615f3eacdb83ae68c014936b96c1e76280b546dee59bfc1d44aa4f1c09d9962946bd6329107dba6daac4153da5c1e2ac11cf3c658e35b4e9e92184b028144b60 SHA512 2ad8f3def2716a6055deb36c1d44126ce96e23d8fa76c6256b6586ed3bdd641245d885f42424279e8753d9a15385ad73f9f823e27119f16e0be8fc0a01207f37
 EBUILD circos-0.55-r1.ebuild 930 BLAKE2B d770b6f34df968b9817f1222a999f9f7c55a2754329854a019718ef12c8efd4d855580325147c82f2983e6af592151b4d39c7915be80ccf36220e7fa1d4c3d21 SHA512 15d004ce7c0fe3d9f9039e9a9dbb664bf988cd8b7a3db7f8185069227879f594cca779ccec6c8864fd81b6e13bf1d7f587ef3abd273b3d41d95d94c5f4d5e1fd
+EBUILD circos-0.69.9.ebuild 1141 BLAKE2B a60fd5fb32715e070f8427c2aacabacf429e9b207883506d069203050c4caaa2ced7b6682296f811e619c41836b1e3011590d0204b22a4cad746cb46fc913f46 SHA512 83384bccf1840809c193c739f815ec1740e17389ec0aa2c4db4edf964543f6c0c20dbc49c8c1102b623646d675686b67b3dfb50742591f3e89d24b6975c6c17a
 MISC metadata.xml 704 BLAKE2B 1f48451e1a2f697d7f05dd569eda5796ec82d322bda6e6c1086411eac50d9ad6761fb25de2264866f9cf5543b1724173fb557927c25a299b96c86c4090d354e9 SHA512 472a9f93c6529b30c4b0f502cb3c498bcf1963d12dffc46d6155368675b20f926ed874a7e0ac4efecb5fd0dd815fc6247ac13de8348ac54cdcde5dd5387921bd
diff --git a/sci-visualization/circos/circos-0.69.9.ebuild b/sci-visualization/circos/circos-0.69.9.ebuild
new file mode 100644
index 000000000000..90bd68efe9c7
--- /dev/null
+++ b/sci-visualization/circos/circos-0.69.9.ebuild
@@ -0,0 +1,55 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+MY_PN="${PN}-$(ver_rs 2 -)"
+DESCRIPTION="Circular layout visualization of genomic and other data"
+HOMEPAGE="http://circos.ca/"
+SRC_URI="http://circos.ca/distribution/${MY_PN}.tgz"
+S="${WORKDIR}/${MY_PN}"
+
+LICENSE="GPL-2+ GPL-3+"
+SLOT="0"
+KEYWORDS="~amd64"
+
+DEPEND="dev-perl/Config-General
+	dev-perl/Font-TTF
+	dev-perl/GD
+	dev-perl/Math-Bezier
+	dev-perl/Math-Round
+	dev-perl/Math-VecStat
+	dev-perl/Params-Validate
+	dev-perl/Readonly
+	dev-perl/Regexp-Common
+	dev-perl/Set-IntSpan
+	dev-perl/Statistics-Basic
+	dev-perl/SVG
+	dev-perl/Text-Format
+	dev-perl/Graphics-ColorObject
+	dev-perl/List-MoreUtils"
+RDEPEND="${DEPEND}"
+
+src_prepare() {
+	# remove windows only things
+	rm -r "${S}/bin/${PN}.exe" || die
+	rm -r "${S}/bin/compile.bat" || die
+	default
+}
+
+src_install() {
+	insinto /opt/${PN}
+	doins -r */
+
+	exeinto /opt/${PN}/bin
+	doexe bin/circos bin/gddiag
+
+	dosym ../../opt/${PN}/bin/circos /usr/bin/circos
+
+	einstalldocs
+
+	local d
+	while IFS="" read -d $'\0' -r d; do
+		dodoc "${d}"
+	done < <(find * -maxdepth 0 -type f -print0)
+}
-- 
cgit v1.2.3