From 129160ec854dca4c3fedb5bcfbcb56930371da0f Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Fri, 1 Jan 2021 21:06:00 +0000 Subject: gentoo new year resync : 01.01.2021 --- sci-physics/Manifest.gz | Bin 5032 -> 5025 bytes sci-physics/cernlib/Manifest | 2 +- sci-physics/cernlib/cernlib-2006-r5.ebuild | 2 +- sci-physics/espresso/Manifest | 6 - sci-physics/espresso/espresso-4.0.0-r2.ebuild | 118 ------------- .../espresso/espresso-4.0_pre20170228.ebuild | 120 ------------- sci-physics/espresso/files/1056.patch | 190 --------------------- sci-physics/espresso/files/2277.patch | 19 --- sci-physics/lammps/Manifest | 21 --- sci-physics/lammps/files/1080.patch | 29 ---- sci-physics/lammps/lammps-20180117.ebuild | 132 -------------- sci-physics/lammps/lammps-20180222.ebuild | 132 -------------- sci-physics/lammps/lammps-20180308.ebuild | 132 -------------- sci-physics/lammps/lammps-20180316.ebuild | 132 -------------- sci-physics/lammps/lammps-20180822.ebuild | 131 -------------- sci-physics/lammps/lammps-20181212.ebuild | 131 -------------- sci-physics/lammps/lammps-20190605.ebuild | 131 -------------- sci-physics/lammps/lammps-20190807-r1.ebuild | 131 -------------- sci-physics/lammps/lammps-20190807.ebuild | 131 -------------- sci-physics/paw/Manifest | 2 +- sci-physics/paw/paw-2.14.04-r4.ebuild | 2 +- 21 files changed, 4 insertions(+), 1690 deletions(-) delete mode 100644 sci-physics/espresso/espresso-4.0.0-r2.ebuild delete mode 100644 sci-physics/espresso/espresso-4.0_pre20170228.ebuild delete mode 100644 sci-physics/espresso/files/1056.patch delete mode 100644 sci-physics/espresso/files/2277.patch delete mode 100644 sci-physics/lammps/files/1080.patch delete mode 100644 sci-physics/lammps/lammps-20180117.ebuild delete mode 100644 sci-physics/lammps/lammps-20180222.ebuild delete mode 100644 sci-physics/lammps/lammps-20180308.ebuild delete mode 100644 sci-physics/lammps/lammps-20180316.ebuild delete mode 100644 sci-physics/lammps/lammps-20180822.ebuild delete mode 100644 sci-physics/lammps/lammps-20181212.ebuild delete mode 100644 sci-physics/lammps/lammps-20190605.ebuild delete mode 100644 sci-physics/lammps/lammps-20190807-r1.ebuild delete mode 100644 sci-physics/lammps/lammps-20190807.ebuild (limited to 'sci-physics') diff --git a/sci-physics/Manifest.gz b/sci-physics/Manifest.gz index 15a373772650..e027a0e16be3 100644 Binary files a/sci-physics/Manifest.gz and b/sci-physics/Manifest.gz differ diff --git a/sci-physics/cernlib/Manifest b/sci-physics/cernlib/Manifest index cdc629cf1483..0ad19151879c 100644 --- a/sci-physics/cernlib/Manifest +++ b/sci-physics/cernlib/Manifest @@ -5,7 +5,7 @@ DIST cernlib_20061220+dfsg3-2.debian.tar.gz 257093 BLAKE2B 35ae90e38ddb935f25253 DIST cernlib_20061220+dfsg3-4.1.debian.tar.xz 170100 BLAKE2B 7bc206a246cc437babae6cdb38bd5831ccf4f665bbe65f2ebabf7df8a68c0b7c317f4a7ed283024bf70b6fe50fa8f01bd9a2882cfba174020a23f768f69c237c SHA512 d259ab304b040c6bab8535c0db60aaa466ef7bb9bbcce9b2d8931505a180c92935d428e0dd45bfa6199ec939f67580a6d3ac1035c0384bdcf9e6601a351ce90a DIST cernlib_20061220+dfsg3-4.3.debian.tar.xz 168928 BLAKE2B 15147d1d84d3e4abb06620154425a035e64d6e5254177f9647634fdf63e4a5aa42deba6c8f638f338cf85e8766732388cc6298813dd5b007d1ef97fddcef3d39 SHA512 8cb666d9ef62627e7e3e55bd1986b40ca9ddfcc882101b1a3597c1d60870e30649b5c7716687f7e4106b30ba0aa88a9ca7bc3a3651b0d1405f55a6f611dc308b DIST cernlib_20061220+dfsg3.orig.tar.gz 6434476 BLAKE2B 069eda316ffbc4873e79952283a0aa2693ed58a3cc369bca72e29a4feaef4840922b4f62ababba1476f2aa0309f68833a4a35a3b5c6ac015bdbd85b3b58b2efe SHA512 11fade45c5ae69c858f37a82e74ab1a69416314a23c12ec5205ee6b918590d66f26d3ae68afa466ae3109d736212968ece956a444270ddd189a27a24c0ccece8 -EBUILD cernlib-2006-r5.ebuild 2941 BLAKE2B 7f46ad84ae5459772974be17007071fd5049584943ecaf9a3d5ea73da7d424efebe3c85cd4482617d0bd78765af9d6f343b1b6d47c021a928ceac2050d8547c7 SHA512 5b5de782e64937d08d7b748d16efbfcd927f99fe05f127426e5bd52be3ce21f741f6ac42157efb6c95318acd38e217c714e39c2c736f8cd5335d3bf26d961557 +EBUILD cernlib-2006-r5.ebuild 2942 BLAKE2B c284963abf6ce801a52eb1100e77c38636851f8b7b5f7740301796b642fd3f9793fe15b3e85fd4ef639b0795d48ffc4daa14c0a6d610017b21875ad416e1a6a9 SHA512 fc3ce4fbe0e4b5b23fb54bdebae1981d1de53237795c929e84bd2753523b2bf911a3401c6b7bf27fc404d8fa7006a2dacbae916c438ba3f8020ff8d4ecf8420a EBUILD cernlib-2006-r6.ebuild 2996 BLAKE2B 02602426dab1d77f98a8f70997d7357715f47eddc87c4a80c39dcf10684617db230a613396754dae7884eaed7805d914738a72aa12f29094bdf89a3d681c1c84 SHA512 d2721cd22118e0ab7bcbdd39cc94c2c5620f99775c089f3918e128ee23e0d34ae96238c0c1e0b80d2fe062c12434085993f7d84cd5f90bb4781ad130ff2e62a6 EBUILD cernlib-2006-r7.ebuild 3010 BLAKE2B 17f778cd95128e09252be544144aa732b9767f767f92096bdf6b3b76c81192fe330f999111e1569eceeeb5a400e58355701e701af1c995b12f5824bce3f24c9c SHA512 9dde5fc5814cf0ce917a0aab2a37c4d5a55b155cf98db3c29e285df87fb8527002541e98f3a5817a0614fa6be7cf7b2bf5d2665027ef9cf43e72a3f936b4093c MISC metadata.xml 759 BLAKE2B f01fad2a4cead94f4c422f4f2906bb26c9c960f4a85c07bb1cc900a058184fb2b0774251e93f3d92e105f9ff4675cf0c9035d4ffe0841c63d54e344bb0b0d149 SHA512 133dd51ec200866d1886a1c077dad4a1a7ec786d77b59e1da147a7e95a5b6e8c9f1ce41dfcfa35c406625ed4aa966891cc5247ef35d7a82791d9b42c91fc7477 diff --git a/sci-physics/cernlib/cernlib-2006-r5.ebuild b/sci-physics/cernlib/cernlib-2006-r5.ebuild index 8a03a5909c64..0e409ed6a6cf 100644 --- a/sci-physics/cernlib/cernlib-2006-r5.ebuild +++ b/sci-physics/cernlib/cernlib-2006-r5.ebuild @@ -18,7 +18,7 @@ SRC_URI=" SLOT="0" LICENSE="GPL-2 LGPL-2 BSD" -KEYWORDS="amd64 hppa sparc x86 ~amd64-linux ~x86-linux" +KEYWORDS="amd64 ~hppa sparc x86 ~amd64-linux ~x86-linux" IUSE="" RDEPEND=" diff --git a/sci-physics/espresso/Manifest b/sci-physics/espresso/Manifest index 138f580b8e3c..11b9da7e9a08 100644 --- a/sci-physics/espresso/Manifest +++ b/sci-physics/espresso/Manifest @@ -1,10 +1,4 @@ -AUX 1056.patch 8628 BLAKE2B 435bd4f01c44142f91978603de0f276f6c16819325e48bda9a234b83d37fc926b56883ce4c3f480f3f27bdb6b2e240ba8e34bd3d0406cfda9a19a1869726c228 SHA512 7ecdb067e10cdb7c7c8568cdda5d9520844eeff44e8914beafc03a2f0cf90f178c872f0c126264952e6b9d8c62b79d0ddb38c1a5121b8beea5bc23da5dad16f2 -AUX 2277.patch 645 BLAKE2B 0314dce1d9ec6b95e3ebfecb6253494e52b732fb27446f146b73bcc8a14ecdc767f434069563b6c6275dc25c591ac4ed422ff693669a28b3ddada29f88efffbc SHA512 f8502c83f05d6328e669e9e0d7d05e1216f59667829432ef4c558398ec39d0ee888479fc8e6387934604ca53477829a9f709565fa10a7aaadd4d455ca35b12c7 -DIST espresso-4.0.0.tar.gz 25767191 BLAKE2B 995678496fe35b957c4a5775f79f6656efbb5f717a43e90f8c5fa406aba7847cd34b00db3f313e5a7b0a11a96b521e8182bdd58129ad68ea4881c9496e3977e5 SHA512 53eb311e8bb7db5aed32dcd3adfd5e1c63e6ae42a22cea41844edfa857fee03ffd717c0739dd46a6cdf8ca7a4c4b0952a036b208fccc4e61de3f383910e7d019 -DIST espresso-4.0_pre20170228.tar.gz 23621395 BLAKE2B 6381e519c59986e50ff74fb3d81cd157f4761e1c46ea96b384487fd079b9c6f881dfa70df8f62e275fdd57bda6a4c714002630cebb02c232029186c3adbb692f SHA512 7d35648d447af3282a76d9d68cfe681734ec18794a38b09e0ae9233f63b62450c643643bcec999ea9c7d4ba070d4fc6f8dc64db8145f536ae017a67ff2d0e0e2 DIST espresso-4.1.3.tar.gz 16947336 BLAKE2B 14d3513eda87f62a8473a0cac0c273b3590bf78ed48b96e76d10c106713f7bbd7d37de951bd3d9210062b34c02bd83a68f3aaf1ca8215ed1dcde590e4e99b113 SHA512 1fe82683eddb7bfd9bae6e446b0f42a50087d755995963905cd419473ad17b204f20049d0cf4af9264898dd6fee36f02744b38fa45cd0e33086374cf2aebd934 -EBUILD espresso-4.0.0-r2.ebuild 2835 BLAKE2B 744290f292afd7e793d339a2380a0ca8accadf7c0a7f23567dc663f415ac3af1e460669ebab60a9c8c2244696199126ef153d69ec476a081b32f3b45dc947a4c SHA512 17ba5ce4623325fdfe1aaa56c0cdacfca7500cf3b9bcfe5648eb1bccbc928452198388f685b669b40bb75d5af7468ef159751d63013af1f3dbffab237e560a2f -EBUILD espresso-4.0_pre20170228.ebuild 2899 BLAKE2B dbc0f3fa8481c0de53ea6eb020f396900fa4804953b4daa26b8b5f91ed915597ee6b5065d8267c9b676f8acec98fab95f73d5d83cf0c2c59428e166ef95b3433 SHA512 ef9fecaa51bdcbd034aadf61a2fe560ebccb38836978f289589130f510236dcfd5dd414ae91197e8e1ba1cab2050b2336891d5cea51071b249c5af25d877084c EBUILD espresso-4.1.3.ebuild 2738 BLAKE2B d2ed0248389ab77d108a57a00a6941051e3c4be5c1b01a5cec90e9851f1d87daa3ab4c1c67254693b971a40d1459009b70eb9df3ede962e75e05a25b8a600c8a SHA512 ef2f0852551ddfbf427379a71ebd2c1924b0fabce083d0f9130b9de47eeb1099da833cd28bd89efe301db7df0ac5d215dc4a0635757e9ba2e2914533c8df01f0 EBUILD espresso-9999.ebuild 2738 BLAKE2B d2ed0248389ab77d108a57a00a6941051e3c4be5c1b01a5cec90e9851f1d87daa3ab4c1c67254693b971a40d1459009b70eb9df3ede962e75e05a25b8a600c8a SHA512 ef2f0852551ddfbf427379a71ebd2c1924b0fabce083d0f9130b9de47eeb1099da833cd28bd89efe301db7df0ac5d215dc4a0635757e9ba2e2914533c8df01f0 MISC metadata.xml 476 BLAKE2B f76690b14e947d107cab9c5601cbdc62fc3160e03114ceeca6b45f6d29960691bbdf2d740694198d88cbb31311e5bf0ef0d2b225d276da71030e643188394cf8 SHA512 be0595e319ca81b2293857b6365e8ec9397548a8f30ff5b39f8b267c51dd0a1c08835b2880bdc0714ae7c6264066c88ee9f6ac053c54c4419cdabe5808678184 diff --git a/sci-physics/espresso/espresso-4.0.0-r2.ebuild b/sci-physics/espresso/espresso-4.0.0-r2.ebuild deleted file mode 100644 index 0afbf393e9a9..000000000000 --- a/sci-physics/espresso/espresso-4.0.0-r2.ebuild +++ /dev/null @@ -1,118 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) -CMAKE_MAKEFILE_GENERATOR="ninja" - -inherit cmake-utils python-single-r1 savedconfig - -DESCRIPTION="Extensible Simulation Package for Research on Soft matter" -HOMEPAGE="http://espressomd.org" - -if [[ ${PV} = 9999 ]]; then - EGIT_REPO_URI="https://github.com/${PN}md/${PN}.git" - EGIT_BRANCH="python" - inherit git-r3 - KEYWORDS="" -else - SRC_URI="https://github.com/${PN}md/${PN}/releases/download/${PV}/${P}.tar.gz" - KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-macos" -fi - -LICENSE="GPL-3" -SLOT="0" -IUSE="cuda doc examples +fftw +hdf5 test" -RESTRICT="!test? ( test )" - -REQUIRED_USE=" - ${PYTHON_REQUIRED_USE}" - -RDEPEND=" - ${PYTHON_DEPS} - $(python_gen_cond_dep ' - >=dev-python/cython-0.26.1[${PYTHON_MULTI_USEDEP}] - dev-python/numpy[${PYTHON_MULTI_USEDEP}] - ') - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - fftw? ( sci-libs/fftw:3.0 ) - dev-libs/boost:=[mpi] - hdf5? ( sci-libs/hdf5:=[mpi] )" - -DEPEND="${RDEPEND} - doc? ( - app-doc/doxygen[dot] - dev-texlive/texlive-latexextra - virtual/latex-base )" - -DOCS=( AUTHORS NEWS README ChangeLog ) - -PATCHES=( "${FILESDIR}/2277.patch" ) - -src_prepare() { - use cuda && cuda_src_prepare - cmake-utils_src_prepare -} - -src_configure() { - mycmakeargs=( - -DWITH_CUDA=$(usex cuda) - -DPYTHON_EXECUTABLE="${PYTHON}" - -DWITH_TESTS=$(usex test) - -DINSTALL_PYPRESSO=OFF - -DCMAKE_DISABLE_FIND_PACKAGE_FFTW3=$(usex !fftw) - -DWITH_HDF5=$(usex hdf5) - -DCMAKE_DISABLE_FIND_PACKAGE_HDF5=$(usex !hdf5) - -DCMAKE_SKIP_RPATH=YES - -DLIBDIR=$(get_libdir) - ) - cmake-utils_src_configure -} - -src_compile() { - cmake-utils_src_compile - use doc && cmake-utils_src_make doxygen - [[ ${PV} = 9999 ]] && use doc && cmake-utils_src_make ug dg tutorials -} - -src_install() { - local i docdir="${S}" - - cmake-utils_src_install - - insinto /usr/share/${PN}/ - doins ${CMAKE_BUILD_DIR}/myconfig-sample.hpp - - save_config ${CMAKE_BUILD_DIR}/src/core/myconfig-final.hpp - - if use doc; then - [[ ${PV} = 9999 ]] && docdir="${CMAKE_BUILD_DIR}" - newdoc "${docdir}"/doc/dg/dg.pdf developer_guide.pdf - newdoc "${docdir}"/doc/ug/ug.pdf user_guide.pdf - for i in "${docdir}/doc/tutorials/python"/*/[0-9]*.pdf; do - newdoc "${i}" "tutorial_${i##*/}" - done - dodoc -r ${CMAKE_BUILD_DIR}/doc/doxygen/html - fi - - if use examples; then - insinto "/usr/share/${PN}/examples/python" - doins -r samples/${i}/. - fi -} - -pkg_postinst() { - echo - elog "Please read and cite:" - elog "ESPResSo, Comput. Phys. Commun. 174(9) ,704, 2006." - elog "https://dx.doi.org/10.1016/j.cpc.2005.10.005" - echo - elog "If you need more features, change" - elog "/etc/portage/savedconfig/${CATEGORY}/${PF}" - elog "and reemerge with USE=savedconfig" - echo - elog "For a full feature list see:" - elog "/usr/share/${PN}/myconfig-sample.hpp" - echo -} diff --git a/sci-physics/espresso/espresso-4.0_pre20170228.ebuild b/sci-physics/espresso/espresso-4.0_pre20170228.ebuild deleted file mode 100644 index e7c540b16298..000000000000 --- a/sci-physics/espresso/espresso-4.0_pre20170228.ebuild +++ /dev/null @@ -1,120 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) -CMAKE_MAKEFILE_GENERATOR="ninja" - -inherit cmake-utils python-single-r1 savedconfig - -DESCRIPTION="Extensible Simulation Package for Research on Soft matter" -HOMEPAGE="http://espressomd.org" - -if [[ ${PV} = 9999 ]]; then - EGIT_REPO_URI="https://github.com/${PN}md/${PN}.git" - EGIT_BRANCH="master" - inherit git-r3 - KEYWORDS="" -else - inherit vcs-snapshot - COMMIT="8a021f5e8b1d508f356f4419d360bd9dfb7fec2c" - SRC_URI="https://github.com/${PN}md/${PN}/archive/${COMMIT}.tar.gz -> ${P}.tar.gz" - KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-macos" -fi - -LICENSE="GPL-3" -SLOT="0" -IUSE="cuda doc examples +fftw +hdf5 test" -RESTRICT="!test? ( test )" - -REQUIRED_USE=" - ${PYTHON_REQUIRED_USE}" - -RDEPEND=" - ${PYTHON_DEPS} - $(python_gen_cond_dep ' - >dev-python/cython-0.22[${PYTHON_MULTI_USEDEP}] - dev-python/numpy[${PYTHON_MULTI_USEDEP}] - ') - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - fftw? ( sci-libs/fftw:3.0 ) - dev-libs/boost:=[mpi] - hdf5? ( sci-libs/hdf5:=[cxx] )" - -DEPEND="${RDEPEND} - doc? ( - app-doc/doxygen[dot] - dev-texlive/texlive-latexextra - virtual/latex-base )" - -DOCS=( AUTHORS NEWS README ChangeLog ) - -PATCHES=( "${FILESDIR}"/1056.patch ) - -src_prepare() { - use cuda && cuda_src_prepare - cmake-utils_src_prepare -} - -src_configure() { - mycmakeargs=( - -DWITH_CUDA=$(usex cuda) - -DPYTHON_EXECUTABLE="${PYTHON}" - -DWITH_TESTS=$(usex test) - -DWITH_SCAFACOS=ON - -DINSTALL_PYPRESSO=OFF - -DCMAKE_DISABLE_FIND_PACKAGE_FFTW3=$(usex !fftw) - -DCMAKE_DISABLE_FIND_PACKAGE_HDF5=$(usex !hdf5) - -DCMAKE_SKIP_RPATH=YES - -DLIBDIR=$(get_libdir) - ) - cmake-utils_src_configure -} - -src_compile() { - cmake-utils_src_compile - use doc && cmake-utils_src_make doxygen - [[ ${PV} = 9999 ]] && use doc && cmake-utils_src_make ug dg tutorials -} - -src_install() { - local i docdir="${S}" - - cmake-utils_src_install - - insinto /usr/share/${PN}/ - doins ${CMAKE_BUILD_DIR}/myconfig-sample.hpp - - save_config ${CMAKE_BUILD_DIR}/src/core/myconfig-final.hpp - - if use doc; then - [[ ${PV} = 9999 ]] && docdir="${CMAKE_BUILD_DIR}" - newdoc "${docdir}"/doc/dg/dg.pdf developer_guide.pdf - newdoc "${docdir}"/doc/ug/ug.pdf user_guide.pdf - for i in "${docdir}/doc/tutorials/python"/*/[0-9]*.pdf; do - newdoc "${i}" "tutorial_${i##*/}" - done - dodoc -r ${CMAKE_BUILD_DIR}/doc/doxygen/html - fi - - if use examples; then - insinto "/usr/share/${PN}/examples/" - doins -r samples/python/. - fi -} - -pkg_postinst() { - echo - elog "Please read and cite:" - elog "ESPResSo, Comput. Phys. Commun. 174(9) ,704, 2006." - elog "https://dx.doi.org/10.1016/j.cpc.2005.10.005" - echo - elog "If you need more features, change" - elog "/etc/portage/savedconfig/${CATEGORY}/${PF}" - elog "and reemerge with USE=savedconfig" - echo - elog "For a full feature list see:" - elog "/usr/share/${PN}/myconfig-sample.hpp" - echo -} diff --git a/sci-physics/espresso/files/1056.patch b/sci-physics/espresso/files/1056.patch deleted file mode 100644 index 18a478e446b1..000000000000 --- a/sci-physics/espresso/files/1056.patch +++ /dev/null @@ -1,190 +0,0 @@ -From d075cbaa80ce0b484c8422be27c5b5680f6abee4 Mon Sep 17 00:00:00 2001 -From: Christoph Junghans -Date: Fri, 3 Mar 2017 16:05:45 -0700 -Subject: [PATCH] cmake: install all shared libs in back in libdir - -some libraries weren't installed and the python module path -isn't in the LD_LIBRARY_PATH and hence partly revert -80ad49e954f4a6590707fd86e4fd586682ad626d ---- - CMakeLists.txt | 4 ++++ - src/core/CMakeLists.txt | 4 ++-- - src/core/actor/CMakeLists.txt | 4 ++-- - src/core/constraints/CMakeLists.txt | 1 + - src/core/correlators/CMakeLists.txt | 1 + - src/core/immersed_boundary/CMakeLists.txt | 4 ++-- - src/core/object-in-fluid/CMakeLists.txt | 2 +- - src/core/observables/CMakeLists.txt | 1 + - src/core/scafacos/CMakeLists.txt | 2 +- - src/core/shapes/CMakeLists.txt | 1 + - src/core/utils/CMakeLists.txt | 1 + - src/script_interface/CMakeLists.txt | 1 + - 12 files changed, 18 insertions(+), 8 deletions(-) - -diff --git a/CMakeLists.txt b/CMakeLists.txt -index cf49c40..7a8bc15 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -238,6 +238,10 @@ if (NOT DEFINED DATA) - set(DATA "share/espresso") - endif(NOT DEFINED DATA) - -+if (NOT DEFINED LIBDIR) -+ set(LIBDIR "lib") -+endif(NOT DEFINED LIBDIR) -+ - if (NOT DEFINED BINDIR) - set(BINDIR "bin") - endif(NOT DEFINED BINDIR) -diff --git a/src/core/CMakeLists.txt b/src/core/CMakeLists.txt -index 9982a54..13bb052 100644 ---- a/src/core/CMakeLists.txt -+++ b/src/core/CMakeLists.txt -@@ -23,7 +23,7 @@ add_custom_target(EspressoConfig DEPENDS config-features.hpp config-features.cpp - add_dependencies(EspressoConfig myconfig) - - add_library(EspressoCore SHARED ${EspressoCore_SRC} config-features.cpp config-version.cpp) --install(TARGETS EspressoCore LIBRARY DESTINATION ${PYTHON_INSTDIR}) -+install(TARGETS EspressoCore LIBRARY DESTINATION ${LIBDIR}) - add_dependencies(EspressoCore EspressoConfig) - - target_link_libraries(EspressoCore ${LIBRARIES} Actor ObjectInFluid ImmersedBoundary Shapes Constraints EspressoUtils Correlators Observables) -@@ -43,7 +43,7 @@ if(CUDA) - cuda_include_directories(${CMAKE_CURRENT_BINARY_DIR}) - - cuda_add_library(EspressoCuda SHARED ${EspressoCuda_SRC}) -- install(TARGETS EspressoCuda DESTINATION ${PYTHON_INSTDIR}) -+ install(TARGETS EspressoCuda DESTINATION ${PYTHON_INSTDIR}/espressomd) - add_dependencies(EspressoCuda EspressoConfig) - - set_target_properties(EspressoCuda PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/actor/CMakeLists.txt b/src/core/actor/CMakeLists.txt -index 0421243..1b5eafe 100644 ---- a/src/core/actor/CMakeLists.txt -+++ b/src/core/actor/CMakeLists.txt -@@ -1,7 +1,7 @@ - file(GLOB Actor_SRC *.cpp) - - add_library(Actor SHARED ${Actor_SRC}) --install(TARGETS Actor LIBRARY DESTINATION ${PYTHON_INSTDIR} ARCHIVE DESTINATION ${PYTHON_INSTDIR}) -+install(TARGETS Actor LIBRARY DESTINATION ${LIBDIR} ARCHIVE DESTINATION ${LIBDIR}) - add_dependencies(Actor EspressoConfig) - - set_target_properties(Actor PROPERTIES MACOSX_RPATH TRUE) -@@ -9,7 +9,7 @@ set_target_properties(Actor PROPERTIES MACOSX_RPATH TRUE) - if(CUDA) - file(GLOB ActorCuda_SRC *.cu) - cuda_add_library(ActorCuda SHARED ${ActorCuda_SRC}) -- install(TARGETS ActorCuda DESTINATION ${PYTHON_INSTDIR}) -+ install(TARGETS ActorCuda DESTINATION ${PYTHON_INSTDIR}/espressomd) - add_dependencies(ActorCuda EspressoConfig) - - add_dependencies(Actor ActorCuda) -diff --git a/src/core/constraints/CMakeLists.txt b/src/core/constraints/CMakeLists.txt -index 0f5c043..d07ad77 100644 ---- a/src/core/constraints/CMakeLists.txt -+++ b/src/core/constraints/CMakeLists.txt -@@ -1,4 +1,5 @@ - file(GLOB Constraints_SRC Constraint.cpp) - add_library(Constraints SHARED ${Constraints_SRC}) -+install(TARGETS Constraints LIBRARY DESTINATION ${LIBDIR}) - add_dependencies(Constraints EspressoConfig) - set_target_properties(Constraints PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/correlators/CMakeLists.txt b/src/core/correlators/CMakeLists.txt -index c5ff02f..fcc3611 100644 ---- a/src/core/correlators/CMakeLists.txt -+++ b/src/core/correlators/CMakeLists.txt -@@ -1,4 +1,5 @@ - file(GLOB Correlators_SRC *.?pp) - add_library(Correlators SHARED ${Correlators_SRC}) -+install(TARGETS Correlators LIBRARY DESTINATION ${LIBDIR}) - add_dependencies(Correlators EspressoConfig) - set_target_properties(Correlators PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/immersed_boundary/CMakeLists.txt b/src/core/immersed_boundary/CMakeLists.txt -index ec7fb85..8e7285f 100644 ---- a/src/core/immersed_boundary/CMakeLists.txt -+++ b/src/core/immersed_boundary/CMakeLists.txt -@@ -1,13 +1,13 @@ - file(GLOB ImmersedBoundary_SRC *.cpp) - add_library(ImmersedBoundary SHARED ${ImmersedBoundary_SRC}) - set_target_properties(ImmersedBoundary PROPERTIES MACOSX_RPATH TRUE) --install(TARGETS ImmersedBoundary LIBRARY DESTINATION ${PYTHON_INSTDIR} ARCHIVE DESTINATION ${PYTHON_INSTDIR}) -+install(TARGETS ImmersedBoundary LIBRARY DESTINATION ${LIBDIR} ARCHIVE DESTINATION ${LIBDIR}) - add_dependencies(ImmersedBoundary EspressoConfig) - - if(CUDA) - file(GLOB ImmersedBoundaryCuda_SRC *.cu) - cuda_add_library(ImmersedBoundaryCuda SHARED ${ImmersedBoundaryCuda_SRC}) -- install(TARGETS ImmersedBoundaryCuda DESTINATION ${PYTHON_INSTDIR}) -+ install(TARGETS ImmersedBoundaryCuda DESTINATION ${PYTHON_INSTDIR}/espressomd) - add_dependencies(ImmersedBoundaryCuda EspressoConfig) - - set_target_properties(ImmersedBoundaryCuda PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/object-in-fluid/CMakeLists.txt b/src/core/object-in-fluid/CMakeLists.txt -index 7154486..c25228a 100644 ---- a/src/core/object-in-fluid/CMakeLists.txt -+++ b/src/core/object-in-fluid/CMakeLists.txt -@@ -1,5 +1,5 @@ - file(GLOB ObjectInFluid_SRC *.cpp) - add_library(ObjectInFluid SHARED ${ObjectInFluid_SRC}) --install(TARGETS ObjectInFluid LIBRARY DESTINATION ${PYTHON_INSTDIR} ARCHIVE DESTINATION ${PYTHON_INSTDIR}) -+install(TARGETS ObjectInFluid LIBRARY DESTINATION ${LIBDIR} ARCHIVE DESTINATION ${LIBDIR}) - add_dependencies(ObjectInFluid EspressoConfig) - set_target_properties(ObjectInFluid PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/observables/CMakeLists.txt b/src/core/observables/CMakeLists.txt -index 9813d86..51ab79d 100644 ---- a/src/core/observables/CMakeLists.txt -+++ b/src/core/observables/CMakeLists.txt -@@ -1,4 +1,5 @@ - file(GLOB Observables_SRC *.?pp) - add_library(Observables SHARED ${Observables_SRC}) -+install(TARGETS Observables LIBRARY DESTINATION ${LIBDIR}) - add_dependencies(Observables EspressoConfig) - set_target_properties(Observables PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/scafacos/CMakeLists.txt b/src/core/scafacos/CMakeLists.txt -index 1479683..3028ca0 100644 ---- a/src/core/scafacos/CMakeLists.txt -+++ b/src/core/scafacos/CMakeLists.txt -@@ -2,7 +2,7 @@ include_directories(${SCAFACOS_INCLUDE_DIRS}) - - file(GLOB Scafacos_SRC *.cpp) - add_library(Scafacos SHARED ${Scafacos_SRC}) --install(TARGETS Scafacos DESTINATION ${PYTHON_INSTDIR}) -+install(TARGETS Scafacos DESTINATION ${PYTHON_INSTDIR}/espressomd) - add_dependencies(Scafacos EspressoConfig) - - target_link_libraries(Scafacos ${SCAFACOS_LDFLAGS}) -diff --git a/src/core/shapes/CMakeLists.txt b/src/core/shapes/CMakeLists.txt -index 0e5ecaa..5be3a9d 100644 ---- a/src/core/shapes/CMakeLists.txt -+++ b/src/core/shapes/CMakeLists.txt -@@ -1,4 +1,5 @@ - file(GLOB Shapes_SRC *.cpp) - add_library(Shapes SHARED ${Shapes_SRC}) -+install(TARGETS Shapes LIBRARY DESTINATION ${LIBDIR}) - add_dependencies(Shapes EspressoConfig) - set_target_properties(Shapes PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/core/utils/CMakeLists.txt b/src/core/utils/CMakeLists.txt -index ec0f6f7..4cd8ada 100644 ---- a/src/core/utils/CMakeLists.txt -+++ b/src/core/utils/CMakeLists.txt -@@ -1,3 +1,4 @@ - file(GLOB EspressoUtils_SRC *.cpp) - add_library(EspressoUtils SHARED ${EspressoUtils_SRC}) -+install(TARGETS EspressoUtils LIBRARY DESTINATION ${LIBDIR}) - set_target_properties(EspressoUtils PROPERTIES MACOSX_RPATH TRUE) -diff --git a/src/script_interface/CMakeLists.txt b/src/script_interface/CMakeLists.txt -index 8aff034..59c1c9d 100644 ---- a/src/script_interface/CMakeLists.txt -+++ b/src/script_interface/CMakeLists.txt -@@ -28,6 +28,7 @@ if(H5MD) - ) - endif(H5MD) - add_library(EspressoScriptInterface SHARED ${EspressoScriptInterface_SRC}) -+install(TARGETS EspressoScriptInterface LIBRARY DESTINATION ${LIBDIR}) - add_dependencies(EspressoScriptInterface EspressoConfig EspressoConfig) - set_target_properties(EspressoScriptInterface PROPERTIES MACOSX_RPATH TRUE) - target_link_libraries(EspressoScriptInterface EspressoCore) --- -2.10.2 - diff --git a/sci-physics/espresso/files/2277.patch b/sci-physics/espresso/files/2277.patch deleted file mode 100644 index 608bd2876121..000000000000 --- a/sci-physics/espresso/files/2277.patch +++ /dev/null @@ -1,19 +0,0 @@ -From 46110a514ce2420a350cca8b9af28e0c4eb51861 Mon Sep 17 00:00:00 2001 -From: Christoph Junghans -Date: Fri, 21 Sep 2018 06:57:16 -0600 -Subject: [PATCH] cmake: install libH5mdCore - ---- - src/core/io/writer/CMakeLists.txt | 1 + - 1 file changed, 1 insertion(+) - -diff --git a/src/core/io/writer/CMakeLists.txt b/src/core/io/writer/CMakeLists.txt -index e677ba273a..42b96c96af 100644 ---- a/src/core/io/writer/h5md/CMakeLists.txt -+++ b/src/core/io/writer/h5md/CMakeLists.txt -@@ -4,4 +4,5 @@ - "${CMAKE_SOURCE_DIR}/libs/h5xx" - ) - add_dependencies(H5mdCore EspressoConfig) -+install(TARGETS H5mdCore LIBRARY DESTINATION ${LIBDIR}) - diff --git a/sci-physics/lammps/Manifest b/sci-physics/lammps/Manifest index 5662e6f87741..3626d767ab7c 100644 --- a/sci-physics/lammps/Manifest +++ b/sci-physics/lammps/Manifest @@ -1,25 +1,4 @@ -AUX 1080.patch 922 BLAKE2B 59325abb5d2f9d9e501c34b539a98efea521ee38872f1e2d3850442aac82adaea3a3c32e644f3d2982aa9aa86dbdfb5bd1373175a89acffac63d87ac542919a7 SHA512 a94bba2ad992f85db0f7d7d04cef235a79e4600e353897032d78ffc3e1f899bc340a5ad8aa1d8da41f9783b67d912dab8c3cd2f83a605a9e0c0ef51bdb909279 -DIST lammps-patch_12Dec2018.tar.gz 114619148 BLAKE2B 089e23681e46868d09991ca6525850838100aa74ce8796f3af602c76b74fd55618c91610193cfc22c1201e5417f11998f924642961b62824c0271e208f87b286 SHA512 4794fc9bed7974ec33d54b2843f17b29c61a63f91f76c75bec7f00f6f174901f703130564977f8cf7fa9274e7febe096878dc0fa84d65469a5eb8f9b17b58a5e -DIST lammps-patch_16Mar2018.tar.gz 91908414 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035e5ad6685ac59cefe8ba9bb5b5e1d4ed8a2101cf25f9a023929aaa27a48fd980394e172bbc772fcfe9da90e8a7a066087e49deb9aad2e3d71169711397323f -EBUILD lammps-20190605.ebuild 2977 BLAKE2B 345d85601ce372b0632e8fd59cdca0b5e5ba0570309e507416abf48f63c62cca8b0c34db227490ee9e372f4d8de69162a8e4c65de3eaa574fb6fc4143b23503a SHA512 66a5d8d7a39160100b67834d5dda9f2650338c5202f037ea744f1f8a543b4a9dfabce1dfec0ce8376c40b2231be637e61ba1b001fd7e7ebe70e01ebb38c96ac1 -EBUILD lammps-20190807-r1.ebuild 2981 BLAKE2B 596bbab3fd8f1fc2e9704ff4f8a1820f60315f14f5d6ef3789f73cdc65ffeb2940d65f31dea29b729cbf88a2287791ba05a3b89e6a66bc694f6f47b8958be9d6 SHA512 a0f4c13dc9522fd12b683aedf8b8b4ce4f3cf7a94db166f7958beaede73d43ba021abb0b2cb2155faf101832f101adec741cf6ee9edb84e3a52205bf1de6fee9 -EBUILD lammps-20190807.ebuild 2977 BLAKE2B a3744848fa52a8a760380bc63d96827bbff4da11f8d2a920d2564d62420373205c4e86b3fa6854a3d3b8954566a7b1b61c9a104ba0dc858b869879f3074cb9e4 SHA512 bebd28215512949a6c6f99ba187aac9ce720114272c03033cc87bb3386a40778e153da97780d57cf8ffc95bc208ad9df649f1e840b123ebb3484e87b0279bfcc EBUILD lammps-20200303.ebuild 3043 BLAKE2B adc573dde316ae1b4e0f8730a998cb4fd4100ef7543f337d255034a2e2018428209d063977f4f1726a35b68ac46232a54b55e79ebada774d6dac106017e419b9 SHA512 65e11efe60e38b668a69a84922cb7130c7ce889b42e4a22c2c0ed1275d8b1a5df72e53da34102ff5e90f5507c36f4326c2dc0b8cd657703aa866990eb3799464 MISC metadata.xml 1400 BLAKE2B 799d1c7a8a17a78af7de38cba5058ebe2b79eb577f8bcfa918459bccedecf151adc9442fe2031f16c6215b9126045a7472cb91fdf0d9a68c6f22271a5a2a5226 SHA512 8f864d325dfcbba719be7f7860485810a63a685739d0f2a0ec45989362b3eec28351d4ad34f579572f638291f2bad96ac04ca6eacd4c886ffbb77fb6d06dbe12 diff --git a/sci-physics/lammps/files/1080.patch b/sci-physics/lammps/files/1080.patch deleted file mode 100644 index 85538b2a638c..000000000000 --- a/sci-physics/lammps/files/1080.patch +++ /dev/null @@ -1,29 +0,0 @@ -From a10bb4b96f40f3b5574b0fade2cfece8bf4c6fc9 Mon Sep 17 00:00:00 2001 -From: Christoph Junghans -Date: Thu, 23 Aug 2018 15:02:36 -0600 -Subject: [PATCH] cmake: fix link issue with --as-needed - ---- - cmake/CMakeLists.txt | 5 ++++- - 1 file changed, 4 insertions(+), 1 deletion(-) - -diff --git a/cmake/CMakeLists.txt b/cmake/CMakeLists.txt -index 460d177c92..51997593db 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -276,11 +276,14 @@ endif() - - if(PKG_MSCG OR PKG_USER-ATC OR PKG_USER-AWPMD OR PKG_USER-QUIP OR PKG_LATTE) - find_package(LAPACK) -- if(NOT LAPACK_FOUND) -+ find_package(BLAS) -+ if(NOT LAPACK_FOUND OR NOT BLAS_FOUND) - enable_language(Fortran) - file(GLOB LAPACK_SOURCES ${LAMMPS_LIB_SOURCE_DIR}/linalg/*.[fF]) - add_library(linalg STATIC ${LAPACK_SOURCES}) - set(LAPACK_LIBRARIES linalg) -+ else() -+ list(APPEND LAPACK_LIBRARIES ${BLAS_LIBRARIES}) - endif() - endif() - diff --git a/sci-physics/lammps/lammps-20180117.ebuild b/sci-physics/lammps/lammps-20180117.ebuild deleted file mode 100644 index 61fd0f7d4703..000000000000 --- a/sci-physics/lammps/lammps-20180117.ebuild +++ /dev/null @@ -1,132 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DBUILD_SHARED_LIBS=ON - -DENABLE_MPI=$(usex mpi) - -DENABLE_GPU=$(usex cuda) - -DENABLE_TESTING=$(usex test) - -DENABLE_ASPHERE=ON - -DENABLE_BODY=ON - -DENABLE_CLASS2=ON - -DENABLE_COLLOID=ON - -DENABLE_COMPRESS=ON - -DENABLE_CORESHELL=ON - -DENABLE_DIPOLE=ON - -DENABLE_GRANULAR=ON - -DENABLE_KSPACE=ON - -DFFT=FFTW3 - -DENABLE_MANYBODY=ON - -DENABLE_MC=ON - -DENABLE_MEAM=ON - -DENABLE_MISC=ON - -DLAMMPS_XDR=ON #630444 - -DENABLE_MOLECULE=ON - -DENABLE_PERI=ON - -DENABLE_QEQ=ON - -DENABLE_REAX=ON - -DENABLE_REPLICA=ON - -DENABLE_RIGID=ON - -DENABLE_SHOCK=ON - -DENABLE_SNAP=ON - -DENABLE_SRD=ON - -DENABLE_PYTHON=ON - -DENABLE_MPIIO=$(usex mpi) - -DENABLE_VORONOI=ON - -DENABLE_USER-ATC=ON - -DENABLE_USER-AWPMD=ON - -DENABLE_USER-CGDNA=ON - -DENABLE_USER-CGSDK=ON - -DENABLE_USER-COLVARS=ON - -DENABLE_USER-DIFFRACTION=ON - -DENABLE_USER-DPD=ON - -DENABLE_USER-DRUDE=ON - -DENABLE_USER-EFF=ON - -DENABLE_USER-FEP=ON - -DENABLE_USER-H5MD=$(usex mpi) - -DENABLE_USER-LB=$(usex mpi) - -DENABLE_USER-MANIFOLD=ON - -DENABLE_USER-MEAMC=ON - -DENABLE_USER-MGPT=ON - -DENABLE_USER-MISC=ON - -DENABLE_USER-MOLFILE=ON - -DENABLE_USER-NETCDF=$(usex netcdf) - -DENABLE_USER-PHONON=ON - -DENABLE_USER-QTB=ON - -DENABLE_USER-REAXC=ON - -DENABLE_USER-SMD=ON - -DENABLE_USER-SMTBQ=ON - -DENABLE_USER-SPH=ON - -DENABLE_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - local LAMMPS_POTENTIALS="usr/share/${PN}/potentials" - insinto "/${LAMMPS_POTENTIALS}" - doins "${S}"/../potentials/* - echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps - doenvd 99lammps - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20180222.ebuild b/sci-physics/lammps/lammps-20180222.ebuild deleted file mode 100644 index 61fd0f7d4703..000000000000 --- a/sci-physics/lammps/lammps-20180222.ebuild +++ /dev/null @@ -1,132 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DBUILD_SHARED_LIBS=ON - -DENABLE_MPI=$(usex mpi) - -DENABLE_GPU=$(usex cuda) - -DENABLE_TESTING=$(usex test) - -DENABLE_ASPHERE=ON - -DENABLE_BODY=ON - -DENABLE_CLASS2=ON - -DENABLE_COLLOID=ON - -DENABLE_COMPRESS=ON - -DENABLE_CORESHELL=ON - -DENABLE_DIPOLE=ON - -DENABLE_GRANULAR=ON - -DENABLE_KSPACE=ON - -DFFT=FFTW3 - -DENABLE_MANYBODY=ON - -DENABLE_MC=ON - -DENABLE_MEAM=ON - -DENABLE_MISC=ON - -DLAMMPS_XDR=ON #630444 - -DENABLE_MOLECULE=ON - -DENABLE_PERI=ON - -DENABLE_QEQ=ON - -DENABLE_REAX=ON - -DENABLE_REPLICA=ON - -DENABLE_RIGID=ON - -DENABLE_SHOCK=ON - -DENABLE_SNAP=ON - -DENABLE_SRD=ON - -DENABLE_PYTHON=ON - -DENABLE_MPIIO=$(usex mpi) - -DENABLE_VORONOI=ON - -DENABLE_USER-ATC=ON - -DENABLE_USER-AWPMD=ON - -DENABLE_USER-CGDNA=ON - -DENABLE_USER-CGSDK=ON - -DENABLE_USER-COLVARS=ON - -DENABLE_USER-DIFFRACTION=ON - -DENABLE_USER-DPD=ON - -DENABLE_USER-DRUDE=ON - -DENABLE_USER-EFF=ON - -DENABLE_USER-FEP=ON - -DENABLE_USER-H5MD=$(usex mpi) - -DENABLE_USER-LB=$(usex mpi) - -DENABLE_USER-MANIFOLD=ON - -DENABLE_USER-MEAMC=ON - -DENABLE_USER-MGPT=ON - -DENABLE_USER-MISC=ON - -DENABLE_USER-MOLFILE=ON - -DENABLE_USER-NETCDF=$(usex netcdf) - -DENABLE_USER-PHONON=ON - -DENABLE_USER-QTB=ON - -DENABLE_USER-REAXC=ON - -DENABLE_USER-SMD=ON - -DENABLE_USER-SMTBQ=ON - -DENABLE_USER-SPH=ON - -DENABLE_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - local LAMMPS_POTENTIALS="usr/share/${PN}/potentials" - insinto "/${LAMMPS_POTENTIALS}" - doins "${S}"/../potentials/* - echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps - doenvd 99lammps - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20180308.ebuild b/sci-physics/lammps/lammps-20180308.ebuild deleted file mode 100644 index 61fd0f7d4703..000000000000 --- a/sci-physics/lammps/lammps-20180308.ebuild +++ /dev/null @@ -1,132 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DBUILD_SHARED_LIBS=ON - -DENABLE_MPI=$(usex mpi) - -DENABLE_GPU=$(usex cuda) - -DENABLE_TESTING=$(usex test) - -DENABLE_ASPHERE=ON - -DENABLE_BODY=ON - -DENABLE_CLASS2=ON - -DENABLE_COLLOID=ON - -DENABLE_COMPRESS=ON - -DENABLE_CORESHELL=ON - -DENABLE_DIPOLE=ON - -DENABLE_GRANULAR=ON - -DENABLE_KSPACE=ON - -DFFT=FFTW3 - -DENABLE_MANYBODY=ON - -DENABLE_MC=ON - -DENABLE_MEAM=ON - -DENABLE_MISC=ON - -DLAMMPS_XDR=ON #630444 - -DENABLE_MOLECULE=ON - -DENABLE_PERI=ON - -DENABLE_QEQ=ON - -DENABLE_REAX=ON - -DENABLE_REPLICA=ON - -DENABLE_RIGID=ON - -DENABLE_SHOCK=ON - -DENABLE_SNAP=ON - -DENABLE_SRD=ON - -DENABLE_PYTHON=ON - -DENABLE_MPIIO=$(usex mpi) - -DENABLE_VORONOI=ON - -DENABLE_USER-ATC=ON - -DENABLE_USER-AWPMD=ON - -DENABLE_USER-CGDNA=ON - -DENABLE_USER-CGSDK=ON - -DENABLE_USER-COLVARS=ON - -DENABLE_USER-DIFFRACTION=ON - -DENABLE_USER-DPD=ON - -DENABLE_USER-DRUDE=ON - -DENABLE_USER-EFF=ON - -DENABLE_USER-FEP=ON - -DENABLE_USER-H5MD=$(usex mpi) - -DENABLE_USER-LB=$(usex mpi) - -DENABLE_USER-MANIFOLD=ON - -DENABLE_USER-MEAMC=ON - -DENABLE_USER-MGPT=ON - -DENABLE_USER-MISC=ON - -DENABLE_USER-MOLFILE=ON - -DENABLE_USER-NETCDF=$(usex netcdf) - -DENABLE_USER-PHONON=ON - -DENABLE_USER-QTB=ON - -DENABLE_USER-REAXC=ON - -DENABLE_USER-SMD=ON - -DENABLE_USER-SMTBQ=ON - -DENABLE_USER-SPH=ON - -DENABLE_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - local LAMMPS_POTENTIALS="usr/share/${PN}/potentials" - insinto "/${LAMMPS_POTENTIALS}" - doins "${S}"/../potentials/* - echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps - doenvd 99lammps - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20180316.ebuild b/sci-physics/lammps/lammps-20180316.ebuild deleted file mode 100644 index 81370f4910c0..000000000000 --- a/sci-physics/lammps/lammps-20180316.ebuild +++ /dev/null @@ -1,132 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="amd64 x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DBUILD_SHARED_LIBS=ON - -DENABLE_MPI=$(usex mpi) - -DENABLE_GPU=$(usex cuda) - -DENABLE_TESTING=$(usex test) - -DENABLE_ASPHERE=ON - -DENABLE_BODY=ON - -DENABLE_CLASS2=ON - -DENABLE_COLLOID=ON - -DENABLE_COMPRESS=ON - -DENABLE_CORESHELL=ON - -DENABLE_DIPOLE=ON - -DENABLE_GRANULAR=ON - -DENABLE_KSPACE=ON - -DFFT=FFTW3 - -DENABLE_MANYBODY=ON - -DENABLE_MC=ON - -DENABLE_MEAM=ON - -DENABLE_MISC=ON - -DLAMMPS_XDR=ON #630444 - -DENABLE_MOLECULE=ON - -DENABLE_PERI=ON - -DENABLE_QEQ=ON - -DENABLE_REAX=ON - -DENABLE_REPLICA=ON - -DENABLE_RIGID=ON - -DENABLE_SHOCK=ON - -DENABLE_SNAP=ON - -DENABLE_SRD=ON - -DENABLE_PYTHON=ON - -DENABLE_MPIIO=$(usex mpi) - -DENABLE_VORONOI=ON - -DENABLE_USER-ATC=ON - -DENABLE_USER-AWPMD=ON - -DENABLE_USER-CGDNA=ON - -DENABLE_USER-CGSDK=ON - -DENABLE_USER-COLVARS=ON - -DENABLE_USER-DIFFRACTION=ON - -DENABLE_USER-DPD=ON - -DENABLE_USER-DRUDE=ON - -DENABLE_USER-EFF=ON - -DENABLE_USER-FEP=ON - -DENABLE_USER-H5MD=$(usex mpi) - -DENABLE_USER-LB=$(usex mpi) - -DENABLE_USER-MANIFOLD=ON - -DENABLE_USER-MEAMC=ON - -DENABLE_USER-MGPT=ON - -DENABLE_USER-MISC=ON - -DENABLE_USER-MOLFILE=ON - -DENABLE_USER-NETCDF=$(usex netcdf) - -DENABLE_USER-PHONON=ON - -DENABLE_USER-QTB=ON - -DENABLE_USER-REAXC=ON - -DENABLE_USER-SMD=ON - -DENABLE_USER-SMTBQ=ON - -DENABLE_USER-SPH=ON - -DENABLE_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - local LAMMPS_POTENTIALS="usr/share/${PN}/potentials" - insinto "/${LAMMPS_POTENTIALS}" - doins "${S}"/../potentials/* - echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps - doenvd 99lammps - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20180822.ebuild b/sci-physics/lammps/lammps-20180822.ebuild deleted file mode 100644 index 7cb2d7463222..000000000000 --- a/sci-physics/lammps/lammps-20180822.ebuild +++ /dev/null @@ -1,131 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -# https://github.com/lammps/lammps/pull/1080 -PATCHES=( "${FILESDIR}/1080.patch" ) - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DBUILD_SHARED_LIBS=ON - -DBUILD_MPI=$(usex mpi) - -DBUILD_LIB=ON - -DPKG_GPU=$(usex cuda) - -DGPU_API=CUDA - -DENABLE_TESTING=$(usex test) - -DPKG_ASPHERE=ON - -DPKG_BODY=ON - -DPKG_CLASS2=ON - -DPKG_COLLOID=ON - -DPKG_COMPRESS=ON - -DPKG_CORESHELL=ON - -DPKG_DIPOLE=ON - -DPKG_GRANULAR=ON - -DPKG_KSPACE=ON - -DFFT=FFTW3 - -DPKG_MANYBODY=ON - -DPKG_MC=ON - -DPKG_MEAM=ON - -DPKG_MISC=ON - -DPKG_MOLECULE=ON - -DPKG_PERI=ON - -DPKG_QEQ=ON - -DPKG_REAX=ON - -DPKG_REPLICA=ON - -DPKG_RIGID=ON - -DPKG_SHOCK=ON - -DPKG_SNAP=ON - -DPKG_SRD=ON - -DPKG_PYTHON=ON - -DPKG_MPIIO=$(usex mpi) - -DPKG_VORONOI=ON - -DPKG_USER-ATC=ON - -DPKG_USER-AWPMD=ON - -DPKG_USER-CGDNA=ON - -DPKG_USER-CGSDK=ON - -DPKG_USER-COLVARS=ON - -DPKG_USER-DIFFRACTION=ON - -DPKG_USER-DPD=ON - -DPKG_USER-DRUDE=ON - -DPKG_USER-EFF=ON - -DPKG_USER-FEP=ON - -DPKG_USER-H5MD=$(usex mpi) - -DPKG_USER-LB=$(usex mpi) - -DPKG_USER-MANIFOLD=ON - -DPKG_USER-MEAMC=ON - -DPKG_USER-MGPT=ON - -DPKG_USER-MISC=ON - -DPKG_USER-MOLFILE=ON - -DPKG_USER-NETCDF=$(usex netcdf) - -DPKG_USER-PHONON=ON - -DPKG_USER-QTB=ON - -DPKG_USER-REAXC=ON - -DPKG_USER-SMD=ON - -DPKG_USER-SMTBQ=ON - -DPKG_USER-SPH=ON - -DPKG_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20181212.ebuild b/sci-physics/lammps/lammps-20181212.ebuild deleted file mode 100644 index b63164986725..000000000000 --- a/sci-physics/lammps/lammps-20181212.ebuild +++ /dev/null @@ -1,131 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -TCOMMIT=7869c75cac38cb8a3d2ef7747ea12ec5812f5151 -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz - test? ( https://github.com/lammps/lammps-testing/archive/${TCOMMIT}.tar.gz -> ${PN}-testing-${TCOMMIT}.tar.gz )" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DBUILD_SHARED_LIBS=ON - -DBUILD_MPI=$(usex mpi) - -DBUILD_LIB=ON - -DPKG_GPU=$(usex cuda) - -DGPU_API=CUDA - -DENABLE_TESTING=$(usex test) - -DLAMMPS_TESTING_SOURCE_DIR=$(echo "${WORKDIR}"/lammps-testing-*) - -DPKG_ASPHERE=ON - -DPKG_BODY=ON - -DPKG_CLASS2=ON - -DPKG_COLLOID=ON - -DPKG_COMPRESS=ON - -DPKG_CORESHELL=ON - -DPKG_DIPOLE=ON - -DPKG_GRANULAR=ON - -DPKG_KSPACE=ON - -DFFT=FFTW3 - -DPKG_MANYBODY=ON - -DPKG_MC=ON - -DPKG_MEAM=ON - -DPKG_MISC=ON - -DPKG_MOLECULE=ON - -DPKG_PERI=ON - -DPKG_QEQ=ON - -DPKG_REAX=ON - -DPKG_REPLICA=ON - -DPKG_RIGID=ON - -DPKG_SHOCK=ON - -DPKG_SNAP=ON - -DPKG_SRD=ON - -DPKG_PYTHON=ON - -DPKG_MPIIO=$(usex mpi) - -DPKG_VORONOI=ON - -DPKG_USER-ATC=ON - -DPKG_USER-AWPMD=ON - -DPKG_USER-CGDNA=ON - -DPKG_USER-CGSDK=ON - -DPKG_USER-COLVARS=ON - -DPKG_USER-DIFFRACTION=ON - -DPKG_USER-DPD=ON - -DPKG_USER-DRUDE=ON - -DPKG_USER-EFF=ON - -DPKG_USER-FEP=ON - -DPKG_USER-H5MD=$(usex mpi) - -DPKG_USER-LB=$(usex mpi) - -DPKG_USER-MANIFOLD=ON - -DPKG_USER-MEAMC=ON - -DPKG_USER-MGPT=ON - -DPKG_USER-MISC=ON - -DPKG_USER-MOLFILE=ON - -DPKG_USER-NETCDF=$(usex netcdf) - -DPKG_USER-PHONON=ON - -DPKG_USER-QTB=ON - -DPKG_USER-REAXC=ON - -DPKG_USER-SMD=ON - -DPKG_USER-SMTBQ=ON - -DPKG_USER-SPH=ON - -DPKG_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20190605.ebuild b/sci-physics/lammps/lammps-20190605.ebuild deleted file mode 100644 index c09f35787c0f..000000000000 --- a/sci-physics/lammps/lammps-20190605.ebuild +++ /dev/null @@ -1,131 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -TCOMMIT=827be7af84ca100d394ea1cf6d3bc49f6a8eef92 -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz - test? ( https://github.com/lammps/lammps-testing/archive/${TCOMMIT}.tar.gz -> ${PN}-testing-${TCOMMIT}.tar.gz )" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DBUILD_SHARED_LIBS=ON - -DBUILD_MPI=$(usex mpi) - -DBUILD_LIB=ON - -DPKG_GPU=$(usex cuda) - -DGPU_API=CUDA - -DENABLE_TESTING=$(usex test) - -DLAMMPS_TESTING_SOURCE_DIR=$(echo "${WORKDIR}"/lammps-testing-*) - -DPKG_ASPHERE=ON - -DPKG_BODY=ON - -DPKG_CLASS2=ON - -DPKG_COLLOID=ON - -DPKG_COMPRESS=ON - -DPKG_CORESHELL=ON - -DPKG_DIPOLE=ON - -DPKG_GRANULAR=ON - -DPKG_KSPACE=ON - -DFFT=FFTW3 - -DPKG_MANYBODY=ON - -DPKG_MC=ON - -DPKG_MEAM=ON - -DPKG_MISC=ON - -DPKG_MOLECULE=ON - -DPKG_PERI=ON - -DPKG_QEQ=ON - -DPKG_REAX=ON - -DPKG_REPLICA=ON - -DPKG_RIGID=ON - -DPKG_SHOCK=ON - -DPKG_SNAP=ON - -DPKG_SRD=ON - -DPKG_PYTHON=ON - -DPKG_MPIIO=$(usex mpi) - -DPKG_VORONOI=ON - -DPKG_USER-ATC=ON - -DPKG_USER-AWPMD=ON - -DPKG_USER-CGDNA=ON - -DPKG_USER-CGSDK=ON - -DPKG_USER-COLVARS=ON - -DPKG_USER-DIFFRACTION=ON - -DPKG_USER-DPD=ON - -DPKG_USER-DRUDE=ON - -DPKG_USER-EFF=ON - -DPKG_USER-FEP=ON - -DPKG_USER-H5MD=$(usex mpi) - -DPKG_USER-LB=$(usex mpi) - -DPKG_USER-MANIFOLD=ON - -DPKG_USER-MEAMC=ON - -DPKG_USER-MGPT=ON - -DPKG_USER-MISC=ON - -DPKG_USER-MOLFILE=ON - -DPKG_USER-NETCDF=$(usex netcdf) - -DPKG_USER-PHONON=ON - -DPKG_USER-QTB=ON - -DPKG_USER-REAXC=ON - -DPKG_USER-SMD=ON - -DPKG_USER-SMTBQ=ON - -DPKG_USER-SPH=ON - -DPKG_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20190807-r1.ebuild b/sci-physics/lammps/lammps-20190807-r1.ebuild deleted file mode 100644 index b1341c65e68e..000000000000 --- a/sci-physics/lammps/lammps-20190807-r1.ebuild +++ /dev/null @@ -1,131 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_{6,7} ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -TCOMMIT=d0394a77fa2b4b2d545a73ea092cf6de7616aac8 -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz - test? ( https://github.com/lammps/lammps-testing/archive/${TCOMMIT}.tar.gz -> ${PN}-testing-${TCOMMIT}.tar.gz )" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DBUILD_SHARED_LIBS=ON - -DBUILD_MPI=$(usex mpi) - -DBUILD_LIB=ON - -DPKG_GPU=$(usex cuda) - -DGPU_API=CUDA - -DENABLE_TESTING=$(usex test) - -DLAMMPS_TESTING_SOURCE_DIR=$(echo "${WORKDIR}"/lammps-testing-*) - -DPKG_ASPHERE=ON - -DPKG_BODY=ON - -DPKG_CLASS2=ON - -DPKG_COLLOID=ON - -DPKG_COMPRESS=ON - -DPKG_CORESHELL=ON - -DPKG_DIPOLE=ON - -DPKG_GRANULAR=ON - -DPKG_KSPACE=ON - -DFFT=FFTW3 - -DPKG_MANYBODY=ON - -DPKG_MC=ON - -DPKG_MEAM=ON - -DPKG_MISC=ON - -DPKG_MOLECULE=ON - -DPKG_PERI=ON - -DPKG_QEQ=ON - -DPKG_REAX=ON - -DPKG_REPLICA=ON - -DPKG_RIGID=ON - -DPKG_SHOCK=ON - -DPKG_SNAP=ON - -DPKG_SRD=ON - -DPKG_PYTHON=ON - -DPKG_MPIIO=$(usex mpi) - -DPKG_VORONOI=ON - -DPKG_USER-ATC=ON - -DPKG_USER-AWPMD=ON - -DPKG_USER-CGDNA=ON - -DPKG_USER-CGSDK=ON - -DPKG_USER-COLVARS=ON - -DPKG_USER-DIFFRACTION=ON - -DPKG_USER-DPD=ON - -DPKG_USER-DRUDE=ON - -DPKG_USER-EFF=ON - -DPKG_USER-FEP=ON - -DPKG_USER-H5MD=$(usex mpi) - -DPKG_USER-LB=$(usex mpi) - -DPKG_USER-MANIFOLD=ON - -DPKG_USER-MEAMC=ON - -DPKG_USER-MGPT=ON - -DPKG_USER-MISC=ON - -DPKG_USER-MOLFILE=ON - -DPKG_USER-NETCDF=$(usex netcdf) - -DPKG_USER-PHONON=ON - -DPKG_USER-QTB=ON - -DPKG_USER-REAXC=ON - -DPKG_USER-SMD=ON - -DPKG_USER-SMTBQ=ON - -DPKG_USER-SPH=ON - -DPKG_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/lammps/lammps-20190807.ebuild b/sci-physics/lammps/lammps-20190807.ebuild deleted file mode 100644 index 1b0598ab8f6a..000000000000 --- a/sci-physics/lammps/lammps-20190807.ebuild +++ /dev/null @@ -1,131 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit cmake-utils fortran-2 python-r1 - -convert_month() { - local months=( "" Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec ) - echo ${months[${1#0}]} -} - -MY_PV="patch_$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:0:4}" -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator" -HOMEPAGE="https://lammps.sandia.gov/" -TCOMMIT=d0394a77fa2b4b2d545a73ea092cf6de7616aac8 -SRC_URI="https://github.com/lammps/lammps/archive/${MY_PV}.tar.gz -> ${MY_P}.tar.gz - test? ( https://github.com/lammps/lammps-testing/archive/${TCOMMIT}.tar.gz -> ${PN}-testing-${TCOMMIT}.tar.gz )" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda examples gzip lammps-memalign mpi netcdf python test" -RESTRICT="!test? ( test )" - -DEPEND=" - app-arch/gzip - media-libs/libpng:0 - sys-libs/zlib - mpi? ( - virtual/mpi - sci-libs/hdf5[mpi] - ) - python? ( ${PYTHON_DEPS} ) - sci-libs/voro++ - virtual/blas - virtual/lapack - sci-libs/fftw:3.0 - netcdf? ( sci-libs/netcdf ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - dev-cpp/eigen:3 - " -RDEPEND="${DEPEND}" - -REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" - -S="${WORKDIR}/${MY_P}/cmake" - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DBUILD_SHARED_LIBS=ON - -DBUILD_MPI=$(usex mpi) - -DBUILD_LIB=ON - -DPKG_GPU=$(usex cuda) - -DGPU_API=CUDA - -DENABLE_TESTING=$(usex test) - -DLAMMPS_TESTING_SOURCE_DIR=$(echo "${WORKDIR}"/lammps-testing-*) - -DPKG_ASPHERE=ON - -DPKG_BODY=ON - -DPKG_CLASS2=ON - -DPKG_COLLOID=ON - -DPKG_COMPRESS=ON - -DPKG_CORESHELL=ON - -DPKG_DIPOLE=ON - -DPKG_GRANULAR=ON - -DPKG_KSPACE=ON - -DFFT=FFTW3 - -DPKG_MANYBODY=ON - -DPKG_MC=ON - -DPKG_MEAM=ON - -DPKG_MISC=ON - -DPKG_MOLECULE=ON - -DPKG_PERI=ON - -DPKG_QEQ=ON - -DPKG_REAX=ON - -DPKG_REPLICA=ON - -DPKG_RIGID=ON - -DPKG_SHOCK=ON - -DPKG_SNAP=ON - -DPKG_SRD=ON - -DPKG_PYTHON=ON - -DPKG_MPIIO=$(usex mpi) - -DPKG_VORONOI=ON - -DPKG_USER-ATC=ON - -DPKG_USER-AWPMD=ON - -DPKG_USER-CGDNA=ON - -DPKG_USER-CGSDK=ON - -DPKG_USER-COLVARS=ON - -DPKG_USER-DIFFRACTION=ON - -DPKG_USER-DPD=ON - -DPKG_USER-DRUDE=ON - -DPKG_USER-EFF=ON - -DPKG_USER-FEP=ON - -DPKG_USER-H5MD=$(usex mpi) - -DPKG_USER-LB=$(usex mpi) - -DPKG_USER-MANIFOLD=ON - -DPKG_USER-MEAMC=ON - -DPKG_USER-MGPT=ON - -DPKG_USER-MISC=ON - -DPKG_USER-MOLFILE=ON - -DPKG_USER-NETCDF=$(usex netcdf) - -DPKG_USER-PHONON=ON - -DPKG_USER-QTB=ON - -DPKG_USER-REAXC=ON - -DPKG_USER-SMD=ON - -DPKG_USER-SMTBQ=ON - -DPKG_USER-SPH=ON - -DPKG_USER-TALLY=ON - ) - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - # Install python script. - use python && python_foreach_impl python_domodule "${S}"/../python/lammps.py - - if use examples; then - for d in examples bench; do - local LAMMPS_EXAMPLES="/usr/share/${PN}/${d}" - insinto "${LAMMPS_EXAMPLES}" - doins -r "${S}"/../${d}/* - done - fi -} diff --git a/sci-physics/paw/Manifest b/sci-physics/paw/Manifest index 86dd8276dd6d..9f99d4ce9d3d 100644 --- a/sci-physics/paw/Manifest +++ b/sci-physics/paw/Manifest @@ -2,6 +2,6 @@ AUX paw-2.14.04-glibc-2.10.patch 311 BLAKE2B c166583ac5197cda23cfc0594656af52140 DIST paw_2.14.04.dfsg.2-8.debian.tar.gz 75788 BLAKE2B 1f9b5ec528e77cccf48a648b279509b9d36a98c3c7747ff6fa13e2072117b83ccbdd798a81d998f44924cc614d94ab6a713af9b05f54af1c43db4b0699d2b9d9 SHA512 63800b6071c0614d3d68eceffc23117703a9e48f6a9da3fd160b2eb27b326ffe7dc38718245d40e713b2c047967233e1aa56e7381754bbc95804b4c208d1d270 DIST paw_2.14.04.dfsg.2-9.debian.tar.gz 79495 BLAKE2B cd398f5f4452eb160360b8dc9f4d16d95680821afe71f40ae11b4346a2cd29fb5cecf316dd00f1b89225230401a0dc0aaf2ab1a43cbfa55d71f9b4bf9c0e17af SHA512 e0ffd28aef621fbe7ff372bf1add2c3614897c755ada061d80835e43f0e7ebe342c44f5c989110ce53d8896d9738798277689bcb9fcba87c4eeae89e4d340b81 DIST paw_2.14.04.dfsg.2.orig.tar.gz 3334317 BLAKE2B 9aa72ed2d99f7e0f3562dc2a2fc435343c4b1e7330bbfe0f482ab902465a2a7844d331c8941a31f01b6867b26b628b6951a99a46e908a1aa82209e18819df52c SHA512 6e4ef312195936b42ad641a63335586f48e0383e8a7f4330d52173492584f9d03c5fa4eab7e7de594e30556a1daacbe162b4f879718c9c489cb7a89f072b962e -EBUILD paw-2.14.04-r4.ebuild 1793 BLAKE2B 9227affde6ddfca99373ff7d09e7f8bcc2d0e0ac973035675dec77e9fcd4aab7ea32b50ae0cbffa7b67319dc5d1aee17a69a7c1f9d5cbbc892e69c020a06d6e8 SHA512 040d9795bc1115730c9fd7fe11e558759ff81085a16c44a5d94f50108fcc7a3f1368e842582699c40618027f95fb6d757dc27bb6c81a33965150714332f23d6d +EBUILD paw-2.14.04-r4.ebuild 1794 BLAKE2B 4de6dabcf8bd7db730d6f91f0f9a64fd4a9517b631ace19e5562a77ab380134c1b58d0881c5cea92726e3e60ed21b476a2ebe1aeae367d7d33616b2117cdcbed SHA512 3f528eb6a2a68923a0c9a789a24c94f7c5b789410f74ecb62838cc6bdb7dfc3c02b069b1626c5f39c5b632143bfaabb73bb78b50eaaf95f7a05420a941c418a2 EBUILD paw-2.14.04-r5.ebuild 1797 BLAKE2B 2e4960de0c9ef892b4ffd426d032d875f52797b224811c08c5575d352763d66581cd56475a6753c48f24f5d4d3c6bf9586dc3e8e6fe2dcf43e2c7486508e257e SHA512 545245d1ffcf864fa381a51dda25318348010c155b95b0b79f4f1f2e6b845d04f4401b5ce8452e788a510332e2aabddb947e93025fe35d4ab50035d6475a8fd8 MISC metadata.xml 787 BLAKE2B faa020aa68b428c4f15e7447b7030c4f0e986e14ac108a32f2c96b9f198cf50e026f4d1ce7e5bbbf8d554ba18faeb401937147ea77b6ac6cd5ed27f199d1ee0e SHA512 a7b760e73901e6eebc1c39240450ca0e95326d120e8b54bee86004c65c3165a766b10d01de6fd4943a785afd009dff86f224476bb4bfadab3c8deb0b7270c37d diff --git a/sci-physics/paw/paw-2.14.04-r4.ebuild b/sci-physics/paw/paw-2.14.04-r4.ebuild index 74a1cbc75beb..1fdc4634f27b 100644 --- a/sci-physics/paw/paw-2.14.04-r4.ebuild +++ b/sci-physics/paw/paw-2.14.04-r4.ebuild @@ -18,7 +18,7 @@ SRC_URI=" SLOT="0" LICENSE="GPL-2 LGPL-2 BSD" -KEYWORDS="amd64 hppa sparc x86 ~amd64-linux ~x86-linux" +KEYWORDS="amd64 ~hppa sparc x86 ~amd64-linux ~x86-linux" IUSE="" RDEPEND=" -- cgit v1.2.3