From 5adfd733728a4f14df5665f4c2a604a7356e5f19 Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Sun, 11 Jun 2023 14:17:10 +0100 Subject: gentoo auto-resync : 11:06:2023 - 14:17:09 --- sci-chemistry/Manifest.gz | Bin 9514 -> 9515 bytes sci-chemistry/molden/Manifest | 7 -- .../molden/files/molden-4.7-implicit-dec.patch | 12 --- .../molden/files/molden-4.8-ldflags.patch | 26 ------- sci-chemistry/molden/files/molden-5.0-ambfor.patch | 16 ---- .../molden/files/molden-5.0-overflow.patch | 16 ---- sci-chemistry/molden/files/molden-5.5-gcc8.patch | 9 --- sci-chemistry/molden/molden-5.5.ebuild | 82 --------------------- 8 files changed, 168 deletions(-) delete mode 100644 sci-chemistry/molden/files/molden-4.7-implicit-dec.patch delete mode 100644 sci-chemistry/molden/files/molden-4.8-ldflags.patch delete mode 100644 sci-chemistry/molden/files/molden-5.0-ambfor.patch delete mode 100644 sci-chemistry/molden/files/molden-5.0-overflow.patch delete mode 100644 sci-chemistry/molden/files/molden-5.5-gcc8.patch delete mode 100644 sci-chemistry/molden/molden-5.5.ebuild (limited to 'sci-chemistry') diff --git a/sci-chemistry/Manifest.gz b/sci-chemistry/Manifest.gz index 22731953e756..5e6ae377a829 100644 Binary files a/sci-chemistry/Manifest.gz and b/sci-chemistry/Manifest.gz differ diff --git a/sci-chemistry/molden/Manifest b/sci-chemistry/molden/Manifest index 11729f6ec17b..3a4aa389e311 100644 --- a/sci-chemistry/molden/Manifest +++ b/sci-chemistry/molden/Manifest @@ -1,11 +1,4 @@ -AUX molden-4.7-implicit-dec.patch 225 BLAKE2B 5d3a911b27bac3b1041d6b85599468ce6f0b0b8a52a118bf1d8d4ab5e22b7c0bcda0dd9f14241fd8e9bc0b79c966a07da1d40c38839086496f11edf1ff733516 SHA512 9a76dfdd434849532a8625459663ca81d8a948b20f7ea8296ae8d25a51f6c28b3cab2691be0f7683ff5d5b7ed8d84211ac26a5bb22c27891863a1c04299d8fea -AUX molden-4.8-ldflags.patch 866 BLAKE2B ba4e859d0706e17e926b3f55ed03bac5d50dcb0c5f3ddd8f5dd829cd75880bfe64f6f509d3d76acbbe0613c17348df70527be34abb084f19c46ce6f0e11f5964 SHA512 427ec1da9e71b2097164f8fb7448713961f7fdb63b8a51dee23490d6d305129dd12a9e782033588304406dd35aa18ceb7040c32fa09ea38b339f9dc47e0a24a9 -AUX molden-5.0-ambfor.patch 523 BLAKE2B 1443a26ff5fbaab3092a6df6a5ab0d514547d59788030ea1c761b8867cf042ff53f6382b85c7aa5383a85504c99e625e9e9c13cd96e1c52a2e05347286be474a SHA512 f531d3bd50374bf658e710f2e4b649559503b378ab663f03cd9259b9105b6c25eab61318bb3d02814425ecb596802569aa3281741d611d4e1c8fc4da771fd481 -AUX molden-5.0-overflow.patch 341 BLAKE2B c7285c87c0741ecf6bce3bad89883ed6e7720cb72a479c9bea7ad8a1dabcc1ae8894f6811e2d537555a00cb9138a7b579dee631221efb3a721b77b446abcb82d SHA512 342b7531179b8a3c3aedff085022d972bd795d2c56ebf4b49fce5ff60e6cc9ea48ed18258af53042ad72aae400f694aec9692bc0b1abfa960bc100ee02f57981 -AUX molden-5.5-gcc8.patch 328 BLAKE2B e098e680a5b75ff09fbaecf44609055584b0f1c49edc0ea16b81dbff68b06883dc6317340b3dc6b26836958d1f561b3aed383964f7c65126079f74b3023f96dd SHA512 cc1a8c08b9081ff138aedda11887295f0eb31b97174ce45bffae8e563318388035948775f03d39823280103ea522a20939b6294e3d3721e599e6790e4a5695e2 AUX molden-6.9-ldflags.patch 3244 BLAKE2B d5ddd71bade94310d9aaebb71c49dd138af46abbf65069920cfdc3b204cdb7fe21ce049bed90faeaf23da3ec5b9a1121bcab97d012e9ff8af9abdf5619953299 SHA512 2a8235c1bd07aff5ce9fb79d5a6b09353c63bb9fc157d7fe1ada397e567018f3052286a93a04df13573f2e561a6c1e302ee91822338c024e70654ce7dec488bd -DIST molden5.5.tar.gz 4934764 BLAKE2B 6ce71f928ed9aacf8fe9830c4c36a675f81d63e97d08e96519ff74d172540ae0a9af25ca966d6c02cdcbbc43633a0ef80be9d31ef98a80d59a8e1a13374c2f51 SHA512 45269d2c7a52b3b2bf4fdb5f4ca3912637b3414ff9dfcd0d4f23815b3dcf7a53ffee717420d4fbf286b71c972539e756a440f5e37b7b7325ab312c25fc6c47b0 DIST molden6.9.tar.gz 8536291 BLAKE2B f50fd9c6303d215f3b1ea73136a8ecada07102a33cfc5831c412341731d00bd166f59bc260615d4a96c59d50a6a308087f02b637f8a8d36bf19f256ac407ba72 SHA512 dbb4a602f2957d0b1d5afb8748fb8ad012a41fb0dfa816b78e4d2748ea78ee39251846a549fce4b276641d4838a336ecd9cf02b92fcf9739adeb25bb550656ec -EBUILD molden-5.5.ebuild 1736 BLAKE2B b426f0985512921fcde79d669e82025787f0751b5cbb93b339040b8dc7d01e38bc4988e12ef7ca46f721e631f6d6a3a54fffb6349f41bca1c4d94f9d9e34f639 SHA512 f12acc17feac7679ea65d9446904655ab2a44e742943783aa43aa5e774031bde929de060a73203961a04ab7eb3a2bed00321690207799b76e4d158056e555a49 EBUILD molden-6.9-r1.ebuild 1491 BLAKE2B b01b98c504dd7de6ae74864f6ad62b67fc36a0c802295db9e125626c3abb88c028451750bc175de6a9a4b999c91ad87e4c4a157ce446eb8fc95def9154b9e719 SHA512 7d1b31962697cefebb8b43e50bf0bbf59cbd775e19e2563205c7f8f74f06e2a8f92c7e144350a84339d2c5a666c13f6aab6ba7748b4309162b1685649b6a3a20 MISC metadata.xml 272 BLAKE2B 531e98b72776bbe9126811b70943add0f6f43141b01cb75b17ac2c8d1cfb6a9b349022fd411894d2b8eeb0612a73db10aed4ba71f9624bd6dbd172a05fca2c76 SHA512 04f5575703aaaa95e575460ae3de428d3da173b3b741ab52b4aad31e381fef78b325f49f99622ec26a65024437759ea013fc525bd63ee553003c71afcc40d10c diff --git a/sci-chemistry/molden/files/molden-4.7-implicit-dec.patch b/sci-chemistry/molden/files/molden-4.7-implicit-dec.patch deleted file mode 100644 index dd5aba4f17da..000000000000 --- a/sci-chemistry/molden/files/molden-4.7-implicit-dec.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/silly.c b/silly.c -index 57d07e8..102156a 100644 ---- a/silly.c -+++ b/silly.c -@@ -13,6 +13,7 @@ - #include - #include - #include -+#include - - #ifndef WIN32 - #include diff --git a/sci-chemistry/molden/files/molden-4.8-ldflags.patch b/sci-chemistry/molden/files/molden-4.8-ldflags.patch deleted file mode 100644 index 92fa6c665f3f..000000000000 --- a/sci-chemistry/molden/files/molden-4.8-ldflags.patch +++ /dev/null @@ -1,26 +0,0 @@ -diff --git a/makefile b/makefile -index 81147a3..9e2353e 100644 ---- a/makefile -+++ b/makefile -@@ -224,10 +224,10 @@ all: molden gmolden ambfor/ambfor ambfor/ambmd surf/surf - - - molden: $(OBJS) mpdum.o xwin.o -- $(LDR) -o molden $(OBJS) mpdum.o xwin.o $(LIBS) -+ $(LDR) $(LDFLAGS) -o molden $(OBJS) mpdum.o xwin.o $(LIBS) - - gmolden: $(OBJS) mpdum.o xwingl.o -- $(LDR) -o gmolden $(OBJS) mpdum.o xwingl.o $(LIBSG) -+ $(LDR) $(LDFLAGS) -o gmolden $(OBJS) mpdum.o xwingl.o $(LIBSG) - - ambfor/ambfor: ambfor/*.f ambfor/*.c - $(MAKE) -C ambfor FC=${FC} FFLAGS="${FFLAGS}" LDR="${LDR}" CFLAGS="${CFLAGS}" -@@ -269,7 +269,7 @@ short_wrl: short_wrl.o - # Moldens OpenGL helper program - - moldenogl: oglmol.o silly.o -- $(CC) -o moldenogl oglmol.o silly.o $(LIBSOGL) -+ $(CC) $(LDFLAGS) -o moldenogl oglmol.o silly.o $(LIBSOGL) - - # conversion of CADPAC output to molden format - diff --git a/sci-chemistry/molden/files/molden-5.0-ambfor.patch b/sci-chemistry/molden/files/molden-5.0-ambfor.patch deleted file mode 100644 index 9656ff7a79be..000000000000 --- a/sci-chemistry/molden/files/molden-5.0-ambfor.patch +++ /dev/null @@ -1,16 +0,0 @@ - ambfor/makefile | 2 +- - 1 files changed, 1 insertions(+), 1 deletions(-) - -diff --git a/ambfor/makefile b/ambfor/makefile -index 8627a11..dbc23a1 100644 ---- a/ambfor/makefile -+++ b/ambfor/makefile -@@ -47,7 +47,7 @@ ambmd: md.o verlet.o qvdw.o allocmd.o $(OBJS) - $(LDR) -o ambmd md.o verlet.o qvdw.o allocmd.o $(OBJS) $(LIBS) - - ambfor.o: ambfor.f -- ${FC} -c -g -ffast-math -funroll-loops -o ambfor.o ambfor.f -+ ${FC} $(FFLAGS) -c -o ambfor.o ambfor.f - - allocmd.o: alloc.c - $(CC) $(CFLAGS) -DMD -c alloc.c -o allocmd.o diff --git a/sci-chemistry/molden/files/molden-5.0-overflow.patch b/sci-chemistry/molden/files/molden-5.0-overflow.patch deleted file mode 100644 index 4fc406266935..000000000000 --- a/sci-chemistry/molden/files/molden-5.0-overflow.patch +++ /dev/null @@ -1,16 +0,0 @@ - xwin.c | 10 ++++++---- - 1 files changed, 6 insertions(+), 4 deletions(-) - -diff --git a/xwin.c b/xwin.c -index f395909..092edff 100644 ---- a/xwin.c -+++ b/xwin.c -@@ -27353,7 +27355,7 @@ char *errstr; - UpdateZME(); - RedrawScroll(&zscroll); - } -- strcpy(ZMEerr,errstr); -+ strncpy(ZMEerr,errstr,MAXZMEERR); - RedrawStatus(); - } - diff --git a/sci-chemistry/molden/files/molden-5.5-gcc8.patch b/sci-chemistry/molden/files/molden-5.5-gcc8.patch deleted file mode 100644 index b76cb6302679..000000000000 --- a/sci-chemistry/molden/files/molden-5.5-gcc8.patch +++ /dev/null @@ -1,9 +0,0 @@ ---- a/rdchx.f 2016-01-25 17:56:49.000000000 +0600 -+++ b/rdchx.f 2018-08-24 16:51:14.000000000 +0700 -@@ -6004,5 +6004,5 @@ - implicit double precision (a-h,p-z),integer (i-n),logical (o) - parameter (mxcon=10) -- dimension iconn(mxcon+1,*),icnn(mxcon+1) -+ dimension iconn(mxcon+1,*),icnn(*) - - ibnds = 0 diff --git a/sci-chemistry/molden/molden-5.5.ebuild b/sci-chemistry/molden/molden-5.5.ebuild deleted file mode 100644 index 0c0cb0664768..000000000000 --- a/sci-chemistry/molden/molden-5.5.ebuild +++ /dev/null @@ -1,82 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit desktop fortran-2 flag-o-matic toolchain-funcs - -MY_P="${PN}${PV}" - -DESCRIPTION="Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac" -HOMEPAGE="http://www.cmbi.ru.nl/molden/" -SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molgraph/${PN}/${MY_P}.tar.gz" - -LICENSE="MOLDEN" -SLOT="0" -KEYWORDS="amd64 ~x86" -IUSE="opengl" - -RDEPEND=" - x11-libs/libXmu - virtual/glu - opengl? ( - media-libs/freeglut - virtual/opengl ) -" -DEPEND="${RDEPEND} - x11-misc/gccmakedep - app-editors/vim" - # vim provides ex, which the build system uses (surf/Makefile, at least) - -S="${WORKDIR}/${MY_P}" - -PATCHES=( - "${FILESDIR}"/${PN}-5.0-ambfor.patch - "${FILESDIR}"/${PN}-5.0-overflow.patch - "${FILESDIR}"/${PN}-4.8-ldflags.patch - "${FILESDIR}"/${PN}-4.7-implicit-dec.patch - "${FILESDIR}"/${PN}-5.5-gcc8.patch -) - -src_prepare() { - default - sed \ - -e 's:makedepend:gccmakedep:g' \ - -i surf/Makefile || die - sed 's:shell g77:shell $(FC):g' -i makefile || die -} - -src_compile() { - local args=() - - # Use -mieee on alpha, according to the Makefile - use alpha && append-flags -mieee - - # GCC 10 workaround - # bug #724556 - append-fflags $(test-flags-FC -fallow-argument-mismatch) - - args=( - CC="$(tc-getCC) ${CFLAGS}" - FC="$(tc-getFC)" - LDR="$(tc-getFC)" - FFLAGS="${FFLAGS}" - ) - - einfo "Building Molden..." - emake -j1 "${args[@]}" - if use opengl ; then - einfo "Building Molden OpenGL helper..." - emake -j1 "${args[@]}" moldenogl - fi -} - -src_install() { - dobin ${PN} g${PN} $(usex opengl ${PN}ogl "") - doicon gmolden.png - make_desktop_entry gmolden MOLDEN gmolden.png - - dodoc HISTORY README REGISTER - cd doc || die - uncompress * && dodoc * -} -- cgit v1.2.3