From 0f558761aa2dee1017b4751e4017205e015a9560 Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Wed, 29 Jun 2022 12:04:12 +0100 Subject: gentoo resync : 29.12.2022 --- sci-biology/rebase/Manifest | 2 +- sci-biology/rebase/rebase-1901-r1.ebuild | 45 ++++++++++++++++++++++++++++++++ sci-biology/rebase/rebase-1901.ebuild | 45 -------------------------------- 3 files changed, 46 insertions(+), 46 deletions(-) create mode 100644 sci-biology/rebase/rebase-1901-r1.ebuild delete mode 100644 sci-biology/rebase/rebase-1901.ebuild (limited to 'sci-biology/rebase') diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 04e08f78ab4e..f7450ce0bedb 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,3 +1,3 @@ DIST rebase-1901.tar.xz 182532548 BLAKE2B 5ac8d26ab057bcd21dc9c57abeb226ac70cfabb156b48a51f820789626257be55bb21c9eb2099e6e55b1cfe3691480df0ec9b3f4b18b50ba2712b986c6d057b4 SHA512 1e3553e59c3520190754cb40bb0900e466d9ffd206e6460d3262a7d7d2af8aab0e28f3e60187665362824fa3730211c0e2119016ce5fed49095f9de46c7f25d4 -EBUILD rebase-1901.ebuild 1088 BLAKE2B 9364896661246fc5d46a524874f95e395d3648239e89d2de265356e4b949ecd275c4d3e808e7bd60af27aa95257c1a92deac21eb1258e87bb318ba25896c1ada SHA512 d0e971497259f6989f4bd73ee9a5719276e200372d943dbc6c9f9eec4de7e8d71ffa413b19b162c7b028332a82b516e572515bc9e9e0e638a39933b6fdd0a831 +EBUILD rebase-1901-r1.ebuild 1082 BLAKE2B 664fe7c05d97d493ed451965467fbcf3a644cca64229c96a8f186e66382de36433c4dbd77430e94ec6a65e3dd411bd5e53562ced6aa386f3b6b2e6b4b6129e67 SHA512 b801b2b467b8107a6e37bc2356ea9f1ef9b8216dd5d10b7f9fe5630eff2aaa900507aaf3a14111c44786d7d4a84bbe7a2d4028c15c378b9a8d600d31c2b46b98 MISC metadata.xml 908 BLAKE2B c5b8a6f961e426788c9a6b84d01c468fa7613b52da52bf4ba4d057f0c1966ac1092acd219160e96bc2778673ebe82398471044a34e775ded0a5d72221adf363b SHA512 0c9bc87df88e5485350071b4b219dbf90958de0394444fda093fdef18ede4378c0463b6e81bd48c5c162ae0c581d186c693d3474f895a4e4de59d36c3f5a0588 diff --git a/sci-biology/rebase/rebase-1901-r1.ebuild b/sci-biology/rebase/rebase-1901-r1.ebuild new file mode 100644 index 000000000000..a993a8c2c44a --- /dev/null +++ b/sci-biology/rebase/rebase-1901-r1.ebuild @@ -0,0 +1,45 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +MY_PV="${PV#1}" + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +LICENSE="public-domain" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" +RESTRICT="binchecks strip" + +BDEPEND="emboss? ( sci-biology/emboss )" +REPEND="${BDEPEND}" + +src_compile() { + if use emboss; then + einfo + einfo "Indexing Rebase for usage with EMBOSS" + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed" + einfo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} diff --git a/sci-biology/rebase/rebase-1901.ebuild b/sci-biology/rebase/rebase-1901.ebuild deleted file mode 100644 index f85a4b1698bb..000000000000 --- a/sci-biology/rebase/rebase-1901.ebuild +++ /dev/null @@ -1,45 +0,0 @@ -# Copyright 1999-2018 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -MY_PV=${PV#1} - -DESCRIPTION="A restriction enzyme database" -HOMEPAGE="http://rebase.neb.com" -SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" - -SLOT="0" -LICENSE="public-domain" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" -IUSE="emboss minimal" - -RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" -DEPEND="${RDEPEND}" - -RESTRICT="binchecks strip" - -src_compile() { - if use emboss; then - echo; einfo "Indexing Rebase for usage with EMBOSS." - mkdir REBASE || die - EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ - -protofile proto.${MY_PV} -equivalences \ - || die "Indexing Rebase failed." - echo - fi -} - -src_install() { - if ! use minimal; then - insinto /usr/share/${PN} - doins withrefm.${MY_PV} proto.${MY_PV} - fi - newdoc REBASE.DOC README - if use emboss; then - insinto /usr/share/EMBOSS/data/REBASE - doins REBASE/embossre.{enz,ref,sup} - insinto /usr/share/EMBOSS/data - doins REBASE/embossre.equ - fi -} -- cgit v1.2.3