From 7288c6e5fa05acddbf692a5187d925ef85662b46 Mon Sep 17 00:00:00 2001
From: V3n3RiX <venerix@koprulu.sector>
Date: Tue, 18 Apr 2023 11:55:01 +0100
Subject: gentoo auto-resync : 18:04:2023 - 11:55:01

---
 .../bedtools/files/bedtools-2.30.0-gcc13.patch     | 25 ++++++++++++++++++++++
 1 file changed, 25 insertions(+)
 create mode 100644 sci-biology/bedtools/files/bedtools-2.30.0-gcc13.patch

(limited to 'sci-biology/bedtools/files/bedtools-2.30.0-gcc13.patch')

diff --git a/sci-biology/bedtools/files/bedtools-2.30.0-gcc13.patch b/sci-biology/bedtools/files/bedtools-2.30.0-gcc13.patch
new file mode 100644
index 000000000000..c63faf31c851
--- /dev/null
+++ b/sci-biology/bedtools/files/bedtools-2.30.0-gcc13.patch
@@ -0,0 +1,25 @@
+https://github.com/arq5x/bedtools2/pull/1045
+
+From 7d7fb513b9b05b7a0512a83520e9f60036e5ff9a Mon Sep 17 00:00:00 2001
+From: David Seifert <soap@gentoo.org>
+Date: Tue, 18 Apr 2023 11:59:58 +0200
+Subject: [PATCH] Add missing <cstdint> include
+
+* breaks build with GCC 13:
+  https://bugs.gentoo.org/895860
+---
+ src/utils/general/ParseTools.h | 1 +
+ 1 file changed, 1 insertion(+)
+
+diff --git a/src/utils/general/ParseTools.h b/src/utils/general/ParseTools.h
+index e056c149..3418eff1 100644
+--- a/src/utils/general/ParseTools.h
++++ b/src/utils/general/ParseTools.h
+@@ -16,6 +16,7 @@
+ #include "string.h"
+ #include <cstdio>
+ #include <cstdlib>
++#include <cstdint>
+ 
+ using namespace std;
+ 
-- 
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